RNA–Protein interactions for RNA: snR3

snR3, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR3, Length 194 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR3	snR3	YJR054W	P47114	497 aa		4.1	□□□□□ -1.75
snR3	snR3	BNS1	P50084	137 aa		4.1	□□□□□ -1.75
snR3	snR3	BRR6	P53062	197 aa		4.1	□□□□□ -1.75
snR3	snR3	YGR067C	P53243	804 aa		4.1	□□□□□ -1.75
snR3	snR3	YLR152C	P54072	576 aa		4.1	□□□□□ -1.75
snR3	snR3	RRP17	Q04031	235 aa	Predicted RBP	4.1	□□□□□ -1.75
snR3	snR3	SIR4	P11978	1358 aa		4.1	□□□□□ -1.75
snR3	snR3	YKR104W	P0CE69	306 aa		4.09	□□□□□ -1.75
snR3	snR3	PPH21	P23594	369 aa		4.09	□□□□□ -1.75
snR3	snR3	UBC6	P33296	250 aa	Predicted RBP	4.09	□□□□□ -1.75
snR3	snR3	CSE2	P33308	149 aa		4.09	□□□□□ -1.75
snR3	snR3	CAF4	P36130	643 aa		4.09	□□□□□ -1.75
snR3	snR3	MRPL3	P36516	390 aa		4.09	□□□□□ -1.75
snR3	snR3	MRPL39	P36533	70 aa		4.09	□□□□□ -1.75
snR3	snR3	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
snR3	snR3	PTH1	P38876	190 aa	Known RBP	4.09	□□□□□ -1.75
snR3	snR3	SRP14	P38985	146 aa		4.09	□□□□□ -1.75
snR3	snR3	YER186C	P40101	306 aa		4.09	□□□□□ -1.75
snR3	snR3	YMR144W	P40214	342 aa	Known RBP	4.09	□□□□□ -1.75
snR3	snR3	YJL016W	P47072	561 aa		4.09	□□□□□ -1.75
snR3	snR3	YGR015C	P53208	328 aa		4.09	□□□□□ -1.75
snR3	snR3	YIP3	P53633	176 aa		4.09	□□□□□ -1.75
snR3	snR3	SNZ2	P53824	298 aa		4.09	□□□□□ -1.75
snR3	snR3	SPG4	Q04438	115 aa		4.09	□□□□□ -1.75
snR3	snR3	YLR177W	Q06251	628 aa		4.09	□□□□□ -1.75
snR3	snR3	YPR147C	Q06522	304 aa	Known RBP	4.09	□□□□□ -1.75
snR3	snR3	IRC25	Q07951	179 aa		4.09	□□□□□ -1.75
snR3	snR3	MIM1	Q08176	113 aa		4.09	□□□□□ -1.75
snR3	snR3	GRE1	Q08969	168 aa		4.09	□□□□□ -1.75
snR3	snR3	IZH2	Q12442	317 aa		4.09	□□□□□ -1.75
snR3	snR3	YCL021W-A	Q96VH3	125 aa		4.09	□□□□□ -1.75
snR3	snR3	RPS8A	P0CX39	200 aa	Known RBP	4.08	□□□□□ -1.76
snR3	snR3	RPS8B	P0CX40	200 aa	Known RBP	4.08	□□□□□ -1.76
snR3	snR3	SNA3	P14359	133 aa		4.08	□□□□□ -1.76
snR3	snR3	URA6	P15700	204 aa		4.08	□□□□□ -1.76
snR3	snR3	YCR087C-A	P37263	153 aa		4.08	□□□□□ -1.76
snR3	snR3	SEN34	P39707	275 aa		4.08	□□□□□ -1.76
snR3	snR3	SNZ3	P43545	298 aa		4.08	□□□□□ -1.76
snR3	snR3	TMA22	P47089	198 aa	Predicted RBP	4.08	□□□□□ -1.76
snR3	snR3	OST3	P48439	350 aa		4.08	□□□□□ -1.76
snR3	snR3	SLX9	P53251	210 aa	Predicted RBP	4.08	□□□□□ -1.76
snR3	snR3	SDC1	Q03323	175 aa		4.08	□□□□□ -1.76
snR3	snR3	PBA1	Q05778	276 aa		4.08	□□□□□ -1.76
snR3	snR3	SEI1	Q06058	285 aa		4.08	□□□□□ -1.76
snR3	snR3	DXO1	Q06349	442 aa		4.08	□□□□□ -1.76
snR3	snR3	TPO4	Q12256	659 aa		4.08	□□□□□ -1.76
snR3	snR3	QCR2	P07257	368 aa		4.07	□□□□□ -1.76
snR3	snR3	BGL2	P15703	313 aa	Known RBP	4.07	□□□□□ -1.76
snR3	snR3	DRE2	P36152	348 aa		4.07	□□□□□ -1.76
snR3	snR3	SOL2	P37262	315 aa		4.07	□□□□□ -1.76
snR3	snR3	SHE1	P38200	338 aa		4.07	□□□□□ -1.76
snR3	snR3	YFL064C	P43540	174 aa		4.07	□□□□□ -1.76
snR3	snR3	YJR149W	P47177	404 aa		4.07	□□□□□ -1.76
snR3	snR3	MMS2	P53152	137 aa		4.07	□□□□□ -1.76
snR3	snR3	PDR17	P53844	350 aa		4.07	□□□□□ -1.76
snR3	snR3	RNH201	P53942	307 aa		4.07	□□□□□ -1.76
snR3	snR3	UTP15	Q04305	513 aa	Known RBP	4.07	□□□□□ -1.76
snR3	snR3	LOA1	Q06508	300 aa		4.07	□□□□□ -1.76
snR3	snR3	RRP40	Q08285	240 aa	Known RBP	4.07	□□□□□ -1.76
snR3	snR3	PPT2	Q12036	173 aa		4.07	□□□□□ -1.76
snR3	snR3	YER078W-A	Q3E7A2	54 aa		4.07	□□□□□ -1.76
snR3	snR3	ASP3-2	P0CX77	362 aa		4.06	□□□□□ -1.76
snR3	snR3	ASP3-3	P0CX78	362 aa		4.06	□□□□□ -1.76
snR3	snR3	ASP3-4	P0CX79	362 aa		4.06	□□□□□ -1.76
snR3	snR3	ASP3-1	P0CZ17	362 aa		4.06	□□□□□ -1.76
snR3	snR3	CKA2	P19454	339 aa		4.06	□□□□□ -1.76
snR3	snR3	ATG15	P25641	520 aa		4.06	□□□□□ -1.76
snR3	snR3	TRR1	P29509	319 aa	Known RBP	4.06	□□□□□ -1.76
snR3	snR3	FRM2	P37261	193 aa		4.06	□□□□□ -1.76
snR3	snR3	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
snR3	snR3	CRZ1	P53968	678 aa		4.06	□□□□□ -1.76
snR3	snR3	HRI1	Q05905	244 aa	Known RBP	4.06	□□□□□ -1.76
snR3	snR3	TLG2	Q08144	397 aa		4.06	□□□□□ -1.76
snR3	snR3	YNG1	Q08465	219 aa		4.06	□□□□□ -1.76
snR3	snR3	YPL278C	Q08990	100 aa		4.06	□□□□□ -1.76
snR3	snR3	RPL21B	Q12672	160 aa	Known RBP	4.06	□□□□□ -1.76
snR3	snR3	IMP1	P28627	190 aa		4.05	□□□□□ -1.76
snR3	snR3	ARO2	P28777	376 aa	Known RBP	4.05	□□□□□ -1.76
snR3	snR3	ACP1	P32463	125 aa		4.05	□□□□□ -1.76
snR3	snR3	YBL059W	P34224	193 aa		4.05	□□□□□ -1.76
snR3	snR3	AME1	P38313	324 aa		4.05	□□□□□ -1.76
snR3	snR3	AVT7	P40501	490 aa		4.05	□□□□□ -1.76
snR3	snR3	STB1	P42845	420 aa		4.05	□□□□□ -1.76
snR3	snR3	YJR056C	P47115	236 aa		4.05	□□□□□ -1.76
snR3	snR3	YNL140C	P53910	189 aa		4.05	□□□□□ -1.76
snR3	snR3	YPL150W	Q12152	901 aa		4.05	□□□□□ -1.76
snR3	snR3	ERV2	Q12284	196 aa		4.05	□□□□□ -1.76
snR3	snR3	MRX4	Q12467	430 aa		4.05	□□□□□ -1.76
snR3	snR3	PHO2	P07269	559 aa		4.04	□□□□□ -1.76
snR3	snR3	PHO80	P20052	293 aa		4.04	□□□□□ -1.76
snR3	snR3	SHE3	P38272	425 aa	Known RBP	4.04	□□□□□ -1.76
snR3	snR3	YHL049C	P38722	271 aa		4.04	□□□□□ -1.76
snR3	snR3	REE1	P40893	198 aa		4.04	□□□□□ -1.76
snR3	snR3	GTR2	P53290	341 aa		4.04	□□□□□ -1.76
snR3	snR3	ELP3	Q02908	557 aa	Known RBP	4.04	□□□□□ -1.76
snR3	snR3	YPL113C	Q02961	396 aa		4.04	□□□□□ -1.76
snR3	snR3	LIP2	Q06005	328 aa		4.04	□□□□□ -1.76
snR3	snR3	YDR018C	Q12185	396 aa		4.04	□□□□□ -1.76
snR3	snR3	WTM1	Q12363	437 aa	Known RBP	4.04	□□□□□ -1.76
snR3	snR3	COX5A	P00424	153 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 73.6 ms