RNA–Protein interactions for RNA: YOR247W

SRL1, Transcript of Mannoprotein that exhibits a tight association with the cell wall, yeastyeast

Gene SRL1, Length 633 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRL1YOR247W SPO77Q06134 477 aa2.47□□□□□ -2.01
SRL1YOR247W RFM1Q12192 310 aa2.47□□□□□ -2.01
SRL1YOR247W YAL063C-AQ3E791 96 aa2.47□□□□□ -2.01
SRL1YOR247W CPT1P17898 393 aa2.46□□□□□ -2.02
SRL1YOR247W RPS5P26783 225 aaKnown RBP2.46□□□□□ -2.02
SRL1YOR247W VMA6P32366 345 aaKnown RBP2.46□□□□□ -2.02
SRL1YOR247W SGE1P33335 543 aa2.46□□□□□ -2.02
SRL1YOR247W YHL044WP38727 235 aa2.46□□□□□ -2.02
SRL1YOR247W BDH1P39714 382 aa2.46□□□□□ -2.02
SRL1YOR247W COX15P40086 486 aa2.46□□□□□ -2.02
SRL1YOR247W SYS1P41544 203 aa2.46□□□□□ -2.02
SRL1YOR247W FLC3P53121 802 aa2.46□□□□□ -2.02
SRL1YOR247W FMP41P53889 259 aaKnown RBP2.46□□□□□ -2.02
SRL1YOR247W DXO1Q06349 442 aa2.46□□□□□ -2.02
SRL1YOR247W YDL211CQ12121 372 aa2.46□□□□□ -2.02
SRL1YOR247W TCP1P12612 559 aaKnown RBP2.45□□□□□ -2.02
SRL1YOR247W CUP2P15315 225 aa2.45□□□□□ -2.02
SRL1YOR247W RPO26P20435 155 aa2.45□□□□□ -2.02
SRL1YOR247W PBN1P25580 416 aa2.45□□□□□ -2.02
SRL1YOR247W RPB9P27999 122 aa2.45□□□□□ -2.02
SRL1YOR247W VPS21P36017 210 aaKnown RBP2.45□□□□□ -2.02
SRL1YOR247W MRPL39P36533 70 aa2.45□□□□□ -2.02
SRL1YOR247W HMT1P38074 348 aa2.45□□□□□ -2.02
SRL1YOR247W TRR2P38816 342 aa2.45□□□□□ -2.02
SRL1YOR247W RPC17P47076 161 aa2.45□□□□□ -2.02
SRL1YOR247W YJR079WP47126 109 aa2.45□□□□□ -2.02
SRL1YOR247W UFD1P53044 361 aa2.45□□□□□ -2.02
SRL1YOR247W AAH1P53909 347 aa2.45□□□□□ -2.02
SRL1YOR247W RHO3Q00245 231 aaKnown RBP2.45□□□□□ -2.02
SRL1YOR247W BNA7Q04066 261 aa2.45□□□□□ -2.02
SRL1YOR247W PIN3Q06449 215 aa2.45□□□□□ -2.02
SRL1YOR247W LOA1Q06508 300 aa2.45□□□□□ -2.02
SRL1YOR247W YPR147CQ06522 304 aaKnown RBP2.45□□□□□ -2.02
SRL1YOR247W NCB2Q92317 146 aa2.45□□□□□ -2.02
SRL1YOR247W THP2O13539 261 aaKnown RBP2.44□□□□□ -2.02
SRL1YOR247W COQ1P18900 473 aa2.44□□□□□ -2.02
SRL1YOR247W SSO1P32867 290 aa2.44□□□□□ -2.02
SRL1YOR247W YHL049CP38722 271 aa2.44□□□□□ -2.02
SRL1YOR247W PRE6P40303 254 aaKnown RBP2.44□□□□□ -2.02
SRL1YOR247W YRB1P41920 201 aaKnown RBP2.44□□□□□ -2.02
SRL1YOR247W SMD1Q02260 146 aaPredicted RBP2.44□□□□□ -2.02
SRL1YOR247W TVP15Q03860 143 aa2.44□□□□□ -2.02
SRL1YOR247W COQ10Q08058 207 aa2.44□□□□□ -2.02
SRL1YOR247W PLB3Q08108 686 aa2.44□□□□□ -2.02
SRL1YOR247W ADF1Q2V2Q1 113 aa2.44□□□□□ -2.02
SRL1YOR247W YEL009C-AA0A023PZF2 135 aa2.43□□□□□ -2.02
SRL1YOR247W RHO1P06780 209 aaKnown RBP2.43□□□□□ -2.02
SRL1YOR247W YKR104WP0CE69 306 aa2.43□□□□□ -2.02
SRL1YOR247W NOP1P15646 327 aaKnown RBP2.43□□□□□ -2.02
SRL1YOR247W CSG2P35206 410 aa2.43□□□□□ -2.02
SRL1YOR247W YHR127WP38833 243 aaKnown RBP2.43□□□□□ -2.02
SRL1YOR247W YIR035CP40579 254 aa2.43□□□□□ -2.02
SRL1YOR247W JHD2P47156 728 aaPredicted RBP2.43□□□□□ -2.02
SRL1YOR247W ZRG17P53735 605 aa2.43□□□□□ -2.02
SRL1YOR247W SPG4Q04438 115 aa2.43□□□□□ -2.02
SRL1YOR247W DCR2Q05924 578 aa2.43□□□□□ -2.02
SRL1YOR247W IES3Q12345 250 aa2.43□□□□□ -2.02
SRL1YOR247W GIS3Q12418 502 aa2.43□□□□□ -2.02
SRL1YOR247W ARG80P07249 177 aa2.42□□□□□ -2.02
SRL1YOR247W YBR121C-AP0C5L4 52 aa2.42□□□□□ -2.02
SRL1YOR247W YAK1P14680 807 aa2.42□□□□□ -2.02
SRL1YOR247W STE18P18852 110 aa2.42□□□□□ -2.02
SRL1YOR247W BMH1P29311 267 aaKnown RBP2.42□□□□□ -2.02
SRL1YOR247W DRE2P36152 348 aa2.42□□□□□ -2.02
SRL1YOR247W MAL32P38158 584 aa2.42□□□□□ -2.02
SRL1YOR247W MIC12P38341 106 aa2.42□□□□□ -2.02
SRL1YOR247W SSH1P38353 490 aaKnown RBP2.42□□□□□ -2.02
SRL1YOR247W SIP3P38717 1229 aa2.42□□□□□ -2.02
SRL1YOR247W GOS1P38736 223 aa2.42□□□□□ -2.02
SRL1YOR247W YHB1P39676 399 aaKnown RBP2.42□□□□□ -2.02
SRL1YOR247W SNZ3P43545 298 aa2.42□□□□□ -2.02
SRL1YOR247W MAL12P53341 584 aa2.42□□□□□ -2.02
SRL1YOR247W HST4P53688 370 aa2.42□□□□□ -2.02
SRL1YOR247W SNZ2P53824 298 aa2.42□□□□□ -2.02
SRL1YOR247W YDR124WQ04608 324 aa2.42□□□□□ -2.02
SRL1YOR247W RRP40Q08285 240 aaKnown RBP2.42□□□□□ -2.02
SRL1YOR247W YPL264CQ08980 353 aa2.42□□□□□ -2.02
SRL1YOR247W YPS3Q12303 508 aa2.42□□□□□ -2.02
SRL1YOR247W ATG5Q12380 294 aa2.42□□□□□ -2.02
SRL1YOR247W ISD11Q6Q560 94 aa2.42□□□□□ -2.02
SRL1YOR247W SOD1P00445 154 aaKnown RBP2.41□□□□□ -2.02
SRL1YOR247W CDC36P06100 191 aaPredicted RBP2.41□□□□□ -2.02
SRL1YOR247W YMR31P19955 123 aa2.41□□□□□ -2.02
SRL1YOR247W DPB2P24482 689 aaPredicted RBP2.41□□□□□ -2.02
SRL1YOR247W YCR102CP25608 368 aa2.41□□□□□ -2.02
SRL1YOR247W TRM7P38238 310 aaKnown RBP2.41□□□□□ -2.02
SRL1YOR247W ARN2P38724 620 aa2.41□□□□□ -2.02
SRL1YOR247W SPL2P38839 148 aa2.41□□□□□ -2.02
SRL1YOR247W YMR144WP40214 342 aaKnown RBP2.41□□□□□ -2.02
SRL1YOR247W NIF3P53081 288 aa2.41□□□□□ -2.02
SRL1YOR247W OSH6Q02201 448 aa2.41□□□□□ -2.02
SRL1YOR247W CTF19Q02732 369 aa2.41□□□□□ -2.02
SRL1YOR247W GOT1Q03554 138 aa2.41□□□□□ -2.02
SRL1YOR247W YMR226CQ05016 267 aaKnown RBP2.41□□□□□ -2.02
SRL1YOR247W SYC1Q08553 188 aaPredicted RBP2.41□□□□□ -2.02
SRL1YOR247W YBL008W-AQ3E821 79 aa2.41□□□□□ -2.02
SRL1YOR247W SEY1Q99287 776 aa2.41□□□□□ -2.02
SRL1YOR247W NUP157P40064 1391 aaKnown RBP2.4□□□□□ -2.02
SRL1YOR247W YOL163WP0CF20 169 aa2.4□□□□□ -2.03
SRL1YOR247W PRE7P23724 241 aaKnown RBP2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms