RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W AAD14P42884 376 aa8.93□□□□□ -0.98
PRE6YOL038W SUT1P53032 299 aaKnown RBP8.93□□□□□ -0.98
PRE6YOL038W YMR087WQ04299 284 aa8.93□□□□□ -0.98
PRE6YOL038W THP3Q12049 470 aaKnown RBP8.93□□□□□ -0.98
PRE6YOL038W MET17P06106 444 aa8.92□□□□□ -0.98
PRE6YOL038W SIR2P06700 562 aa8.92□□□□□ -0.98
PRE6YOL038W PUT3P25502 979 aaPredicted RBP8.92□□□□□ -0.98
PRE6YOL038W ZRT3P34240 503 aa8.92□□□□□ -0.98
PRE6YOL038W THI2P38141 450 aa8.92□□□□□ -0.98
PRE6YOL038W ARC40P38328 384 aaKnown RBP8.92□□□□□ -0.98
PRE6YOL038W SDP1P40479 209 aa8.92□□□□□ -0.98
PRE6YOL038W SLM1P40485 686 aa8.92□□□□□ -0.98
PRE6YOL038W SGN1P40561 250 aaKnown RBP RIP-Chip data8.92□□□□□ -0.98not detected
PRE6YOL038W PAM16P42949 149 aa8.92□□□□□ -0.98
PRE6YOL038W GPI17Q04080 534 aa8.92□□□□□ -0.98
PRE6YOL038W ARP10Q04549 284 aa8.92□□□□□ -0.98
PRE6YOL038W TRM10Q12400 293 aa8.92□□□□□ -0.98
PRE6YOL038W SAG1P20840 650 aa8.91□□□□□ -0.98
PRE6YOL038W APA2P22108 325 aa8.91□□□□□ -0.98
PRE6YOL038W PEX32P38292 413 aa8.91□□□□□ -0.98
PRE6YOL038W SMM1P53720 384 aaKnown RBP8.91□□□□□ -0.98
PRE6YOL038W AAH1P53909 347 aa8.91□□□□□ -0.98
PRE6YOL038W PRM15Q03262 622 aa8.91□□□□□ -0.98
PRE6YOL038W YMR317WQ04893 1140 aa8.91□□□□□ -0.98
PRE6YOL038W YPR098CQ06089 161 aa8.91□□□□□ -0.98
PRE6YOL038W YLR346CQ06139 101 aa8.91□□□□□ -0.98
PRE6YOL038W YGK3Q12222 375 aaPredicted RBP8.91□□□□□ -0.98
PRE6YOL038W RMD6P39975 231 aa8.9□□□□□ -0.98
PRE6YOL038W AVT6P40074 448 aa8.9□□□□□ -0.98
PRE6YOL038W RBL2P48606 106 aaKnown RBP8.9□□□□□ -0.98
PRE6YOL038W YIP4P53093 235 aa8.9□□□□□ -0.98
PRE6YOL038W MTL1P53214 551 aa8.9□□□□□ -0.98
PRE6YOL038W YNR048WP53740 393 aa8.9□□□□□ -0.98
PRE6YOL038W UTP15Q04305 513 aaKnown RBP8.9□□□□□ -0.98
PRE6YOL038W YLR173WQ06247 608 aa8.9□□□□□ -0.98
PRE6YOL038W GCD1P09032 578 aaPredicted RBP8.89□□□□□ -0.99
PRE6YOL038W RPL30P14120 105 aaKnown RBP8.89□□□□□ -0.99
PRE6YOL038W TCM62P38228 572 aaKnown RBP8.89□□□□□ -0.99
PRE6YOL038W GON7P46984 123 aa8.89□□□□□ -0.99
PRE6YOL038W CCC1P47818 322 aa8.89□□□□□ -0.99
PRE6YOL038W LYS20P48570 428 aaKnown RBP8.89□□□□□ -0.99
PRE6YOL038W GEP7P53171 287 aa8.89□□□□□ -0.99
PRE6YOL038W YNR064CP53750 290 aa8.89□□□□□ -0.99
PRE6YOL038W HLR1Q04429 423 aa8.89□□□□□ -0.99
PRE6YOL038W GAL83Q04739 417 aa8.89□□□□□ -0.99
PRE6YOL038W YMR252CQ04814 134 aa8.89□□□□□ -0.99
PRE6YOL038W GSH2Q08220 491 aa8.89□□□□□ -0.99
PRE6YOL038W FRE5Q08908 694 aa8.89□□□□□ -0.99
PRE6YOL038W LYS21Q12122 440 aaKnown RBP8.89□□□□□ -0.99
PRE6YOL038W NOP56Q12460 504 aaKnown RBP RIP-Chip data8.89□□□□□ -0.99not detected
PRE6YOL038W YMR105W-AQ8TGS8 64 aa8.89□□□□□ -0.99
PRE6YOL038W VCX1Q99385 411 aa8.89□□□□□ -0.99
PRE6YOL038W SGA1P08019 549 aa8.88□□□□□ -0.99
PRE6YOL038W NAM2P11325 894 aa8.88□□□□□ -0.99
PRE6YOL038W VMA6P32366 345 aaKnown RBP8.88□□□□□ -0.99
PRE6YOL038W ANR2P36090 516 aaPredicted RBP8.88□□□□□ -0.99
PRE6YOL038W GOS1P38736 223 aa8.88□□□□□ -0.99
PRE6YOL038W YGL159WP53110 370 aa8.88□□□□□ -0.99
PRE6YOL038W YDR514CQ04408 483 aa8.88□□□□□ -0.99
PRE6YOL038W NMA1Q06178 401 aaKnown RBP8.88□□□□□ -0.99
PRE6YOL038W YGL041W-AP0C5N3 154 aa8.87□□□□□ -0.99
PRE6YOL038W ENA1P13587 1091 aa8.87□□□□□ -0.99
PRE6YOL038W MKS1P34072 584 aa8.87□□□□□ -0.99
PRE6YOL038W PMT6P42934 759 aa8.87□□□□□ -0.99
PRE6YOL038W ENA2Q01896 1091 aa8.87□□□□□ -0.99
PRE6YOL038W NEJ1Q06148 342 aa8.87□□□□□ -0.99
PRE6YOL038W HEM25Q07534 307 aa8.87□□□□□ -0.99
PRE6YOL038W RFU1Q08003 200 aa8.87□□□□□ -0.99
PRE6YOL038W FRE3Q08905 711 aa8.87□□□□□ -0.99
PRE6YOL038W USB1Q12208 290 aaKnown RBP8.87□□□□□ -0.99
PRE6YOL038W ERP4Q12450 207 aa8.87□□□□□ -0.99
PRE6YOL038W ENA5Q12691 1091 aa8.87□□□□□ -0.99
PRE6YOL038W MRPS28P21771 286 aa8.86□□□□□ -0.99
PRE6YOL038W SDS22P36047 338 aa8.86□□□□□ -0.99
PRE6YOL038W GPI18P38211 433 aa8.86□□□□□ -0.99
PRE6YOL038W YER079WP40052 210 aaKnown RBP8.86□□□□□ -0.99
PRE6YOL038W NTA1P40354 457 aa8.86□□□□□ -0.99
PRE6YOL038W NSA1P53136 463 aaPredicted RBP8.86□□□□□ -0.99
PRE6YOL038W YLR152CP54072 576 aa8.86□□□□□ -0.99
PRE6YOL038W YDR248CQ03786 193 aa8.86□□□□□ -0.99
PRE6YOL038W CAC2Q04199 468 aa8.86□□□□□ -0.99
PRE6YOL038W MRX10Q05648 414 aa8.86□□□□□ -0.99
PRE6YOL038W HXT2P23585 541 aa8.85□□□□□ -0.99
PRE6YOL038W YND1P40009 630 aa8.85□□□□□ -0.99
PRE6YOL038W FMC1P40491 155 aa8.85□□□□□ -0.99
PRE6YOL038W WSC2P53832 503 aa8.85□□□□□ -0.99
PRE6YOL038W FRE6Q12473 712 aa8.85□□□□□ -0.99
PRE6YOL038W AFG1P32317 509 aa8.84□□□□□ -0.99
PRE6YOL038W SDS24P38314 527 aa8.84□□□□□ -0.99
PRE6YOL038W PIC2P40035 300 aa8.84□□□□□ -0.99
PRE6YOL038W DLS1P40366 167 aa8.84□□□□□ -0.99
PRE6YOL038W TAF4P50105 388 aa8.84□□□□□ -0.99
PRE6YOL038W NRK1P53915 240 aa8.84□□□□□ -0.99
PRE6YOL038W ASR1Q06834 288 aa8.84□□□□□ -0.99
PRE6YOL038W RBD2Q12270 262 aa8.84□□□□□ -0.99
PRE6YOL038W YOL114CQ12322 202 aa8.84□□□□□ -0.99
PRE6YOL038W MPD1Q12404 318 aaKnown RBP8.84□□□□□ -0.99
PRE6YOL038W MDH1P17505 334 aaKnown RBP RIP-Chip data8.83□□□□□ -1not detected
PRE6YOL038W PPZ2P33329 710 aa8.83□□□□□ -1
PRE6YOL038W IES5P40060 125 aa8.83□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms