RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB3	YNL293W	TAE1	P38340	232 aa		6.54	□□□□□ -1.36
MSB3	YNL293W	CUE1	P38428	203 aa		6.54	□□□□□ -1.36
MSB3	YNL293W	MET30	P39014	640 aa		6.54	□□□□□ -1.36
MSB3	YNL293W	EAF5	P39995	279 aa		6.54	□□□□□ -1.36
MSB3	YNL293W	ISC1	P40015	477 aa	Known RBP	6.54	□□□□□ -1.36
MSB3	YNL293W	YIL060W	P40519	144 aa		6.54	□□□□□ -1.36
MSB3	YNL293W	SHR5	P41912	237 aa		6.54	□□□□□ -1.36
MSB3	YNL293W	IKS1	P47042	667 aa		6.54	□□□□□ -1.36
MSB3	YNL293W	SAY1	P53324	424 aa		6.54	□□□□□ -1.36
MSB3	YNL293W	SMX3	P54999	86 aa	Predicted RBP	6.54	□□□□□ -1.36
MSB3	YNL293W	RCE1	Q03530	315 aa		6.54	□□□□□ -1.36
MSB3	YNL293W	SDH7	Q04401	133 aa		6.54	□□□□□ -1.36
MSB3	YNL293W	DPP1	Q05521	289 aa		6.54	□□□□□ -1.36
MSB3	YNL293W	YLR446W	Q06204	433 aa		6.54	□□□□□ -1.36
MSB3	YNL293W	PRP11	Q07350	266 aa	Predicted RBP	6.54	□□□□□ -1.36
MSB3	YNL293W	HEM25	Q07534	307 aa		6.54	□□□□□ -1.36
MSB3	YNL293W	PAU23	Q07987	124 aa		6.54	□□□□□ -1.36
MSB3	YNL293W	ALG6	Q12001	544 aa	Known RBP	6.54	□□□□□ -1.36
MSB3	YNL293W	PAU17	Q12370	124 aa		6.54	□□□□□ -1.36
MSB3	YNL293W	RDI1	Q12434	202 aa		6.54	□□□□□ -1.36
MSB3	YNL293W	YEL009C-A	A0A023PZF2	135 aa		6.54	□□□□□ -1.36
MSB3	YNL293W	ADE4	P04046	510 aa	Known RBP	6.54	□□□□□ -1.36
MSB3	YNL293W	RIP1	P08067	215 aa		6.54	□□□□□ -1.36
MSB3	YNL293W	YML003W	P0CF16	290 aa		6.54	□□□□□ -1.36
MSB3	YNL293W	SPT15	P13393	240 aa	Known RBP	6.54	□□□□□ -1.36
MSB3	YNL293W	SAC7	P17121	654 aa		6.54	□□□□□ -1.36
MSB3	YNL293W	PRE8	P23639	250 aa		6.54	□□□□□ -1.36
MSB3	YNL293W	KKQ8	P36004	724 aa		6.54	□□□□□ -1.36
MSB3	YNL293W	DAD2	P36162	133 aa		6.54	□□□□□ -1.36
MSB3	YNL293W	LDB7	P38210	180 aa		6.54	□□□□□ -1.36
MSB3	YNL293W	YEA6	P39953	335 aa		6.54	□□□□□ -1.36
MSB3	YNL293W	ARG2	P40360	574 aa		6.54	□□□□□ -1.36
MSB3	YNL293W	FRE4	P53746	719 aa		6.54	□□□□□ -1.36
MSB3	YNL293W	YKR011C	Q02209	353 aa		6.54	□□□□□ -1.36
MSB3	YNL293W	YDR415C	Q04033	374 aa	Predicted RBP	6.54	□□□□□ -1.36
MSB3	YNL293W	ARA2	Q04212	335 aa		6.54	□□□□□ -1.36
MSB3	YNL293W	SWC7	Q06707	132 aa		6.54	□□□□□ -1.36
MSB3	YNL293W	YLR040C	Q07988	224 aa		6.54	□□□□□ -1.36
MSB3	YNL293W	IRC10	Q08118	586 aa		6.54	□□□□□ -1.36
MSB3	YNL293W	YMR030W-A	Q3E760	96 aa		6.54	□□□□□ -1.36
MSB3	YNL293W	SEC7	P11075	2009 aa	Known RBP	6.53	□□□□□ -1.36
MSB3	YNL293W	ANB1	P19211	157 aa		6.53	□□□□□ -1.36
MSB3	YNL293W	SAM2	P19358	384 aa	Known RBP	6.53	□□□□□ -1.36
MSB3	YNL293W	PBN1	P25580	416 aa		6.53	□□□□□ -1.36
MSB3	YNL293W	RTC2	P38279	296 aa		6.53	□□□□□ -1.36
MSB3	YNL293W	YHR127W	P38833	243 aa	Known RBP	6.53	□□□□□ -1.36
MSB3	YNL293W	YHR177W	P38867	453 aa		6.53	□□□□□ -1.36
MSB3	YNL293W	RPA43	P46669	326 aa		6.53	□□□□□ -1.36
MSB3	YNL293W	YHC3	P47040	408 aa		6.53	□□□□□ -1.36
MSB3	YNL293W	BUL1	P48524	976 aa		6.53	□□□□□ -1.36
MSB3	YNL293W	GAS3	Q03655	524 aa		6.53	□□□□□ -1.36
MSB3	YNL293W	YMR160W	Q03823	816 aa		6.53	□□□□□ -1.36
MSB3	YNL293W	MSS11	Q03825	758 aa		6.53	□□□□□ -1.36
MSB3	YNL293W	RSF1	Q05043	376 aa		6.53	□□□□□ -1.36
MSB3	YNL293W	AIM7	Q12156	149 aa		6.53	□□□□□ -1.36
MSB3	YNL293W	NBP2	Q12163	236 aa		6.53	□□□□□ -1.36
MSB3	YNL293W	TY1A-BL	Q12266	440 aa		6.53	□□□□□ -1.36
MSB3	YNL293W	TDH2	P00358	332 aa	Known RBP	6.52	□□□□□ -1.37
MSB3	YNL293W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	6.52	□□□□□ -1.37	not detected
MSB3	YNL293W	BGL2	P15703	313 aa	Known RBP	6.52	□□□□□ -1.37
MSB3	YNL293W	MIG1	P27705	504 aa		6.52	□□□□□ -1.37
MSB3	YNL293W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	6.52	□□□□□ -1.37	not detected
MSB3	YNL293W	GLC7	P32598	312 aa	Known RBP	6.52	□□□□□ -1.37
MSB3	YNL293W	UTR5	P32630	166 aa		6.52	□□□□□ -1.37
MSB3	YNL293W	PRM2	P40534	656 aa		6.52	□□□□□ -1.37
MSB3	YNL293W	YCH1	P42937	148 aa		6.52	□□□□□ -1.37
MSB3	YNL293W	AIM25	P47140	327 aa		6.52	□□□□□ -1.37
MSB3	YNL293W	NIF3	P53081	288 aa		6.52	□□□□□ -1.37
MSB3	YNL293W	PRM8	P53174	237 aa		6.52	□□□□□ -1.37
MSB3	YNL293W	YNL092W	P53934	400 aa		6.52	□□□□□ -1.37
MSB3	YNL293W	YDL057W	Q07379	328 aa		6.52	□□□□□ -1.37
MSB3	YNL293W	SHS1	Q07657	551 aa		6.52	□□□□□ -1.37
MSB3	YNL293W	GUD1	Q07729	489 aa		6.52	□□□□□ -1.37
MSB3	YNL293W	IRC13	Q08630	104 aa		6.52	□□□□□ -1.37
MSB3	YNL293W	TMS1	Q12116	473 aa		6.52	□□□□□ -1.37
MSB3	YNL293W	WTM1	Q12363	437 aa	Known RBP	6.52	□□□□□ -1.37
MSB3	YNL293W	MRPL23	Q12487	163 aa	Predicted RBP	6.52	□□□□□ -1.37
MSB3	YNL293W	YIL177C	P40434	1758 aa		6.52	□□□□□ -1.37
MSB3	YNL293W	YJL225C	P40889	1758 aa		6.52	□□□□□ -1.37
MSB3	YNL293W	HIS1	P00498	297 aa	Known RBP	6.52	□□□□□ -1.37
MSB3	YNL293W	PAI3	P01094	68 aa		6.52	□□□□□ -1.37
MSB3	YNL293W	YHR210C	P38893	341 aa		6.52	□□□□□ -1.37
MSB3	YNL293W	EMC5	P40540	141 aa		6.52	□□□□□ -1.37
MSB3	YNL293W	YFL012W	P43580	148 aa		6.52	□□□□□ -1.37
MSB3	YNL293W	MTO1	P53070	669 aa		6.52	□□□□□ -1.37
MSB3	YNL293W	YIP4	P53093	235 aa		6.52	□□□□□ -1.37
MSB3	YNL293W	BUD9	P53226	547 aa		6.52	□□□□□ -1.37
MSB3	YNL293W	MTQ2	Q03920	221 aa	Predicted RBP	6.52	□□□□□ -1.37
MSB3	YNL293W	TY1A-MR1	Q04215	440 aa		6.52	□□□□□ -1.37
MSB3	YNL293W	THP1	Q08231	455 aa		6.52	□□□□□ -1.37
MSB3	YNL293W	SIA1	Q12212	622 aa		6.52	□□□□□ -1.37
MSB3	YNL293W	HUT1	Q12520	339 aa		6.52	□□□□□ -1.37
MSB3	YNL293W	COX3	P00420	269 aa		6.51	□□□□□ -1.37
MSB3	YNL293W	ILV5	P06168	395 aa	Known RBP	6.51	□□□□□ -1.37
MSB3	YNL293W	SAM35	P14693	329 aa		6.51	□□□□□ -1.37
MSB3	YNL293W	SGF29	P25554	259 aa		6.51	□□□□□ -1.37
MSB3	YNL293W	FEN2	P25621	512 aa	Known RBP	6.51	□□□□□ -1.37
MSB3	YNL293W	URA10	P30402	227 aa		6.51	□□□□□ -1.37
MSB3	YNL293W	DOG2	P38773	246 aa		6.51	□□□□□ -1.37
MSB3	YNL293W	SSN3	P39073	555 aa		6.51	□□□□□ -1.37

Retrieved 100 of 5,963 RNA–protein pairs in 40.1 ms