RNA–Protein interactions for RNA: YMR240C

CUS1, Transcript of Protein required for assembly of U2 snRNP into the spliceosome, yeastyeast

Gene CUS1, Length 1,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUS1YMR240C YDR209CQ03480 137 aa3.36□□□□□ -1.87
CUS1YMR240C MSN4P33749 630 aa3.35□□□□□ -1.87
CUS1YMR240C AST1P35183 429 aa3.35□□□□□ -1.87
CUS1YMR240C YBL081WP38180 368 aaKnown RBP3.35□□□□□ -1.87
CUS1YMR240C HEK2P38199 381 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
CUS1YMR240C YHL049CP38722 271 aa3.35□□□□□ -1.87
CUS1YMR240C SMB1P40018 196 aaKnown RBP3.35□□□□□ -1.87
CUS1YMR240C GLG2P47011 380 aa3.35□□□□□ -1.87
CUS1YMR240C SLX9P53251 210 aaPredicted RBP3.35□□□□□ -1.87
CUS1YMR240C RSM27P53305 110 aa3.35□□□□□ -1.87
CUS1YMR240C DXO1Q06349 442 aa3.35□□□□□ -1.87
CUS1YMR240C YPL119C-AQ3E751 87 aa3.35□□□□□ -1.87
CUS1YMR240C YOL163WP0CF20 169 aa3.34□□□□□ -1.87
CUS1YMR240C HOM6P31116 359 aaKnown RBP3.34□□□□□ -1.87
CUS1YMR240C TRM7P38238 310 aaKnown RBP3.34□□□□□ -1.87
CUS1YMR240C HSH155P49955 971 aaKnown RBP3.34□□□□□ -1.87
CUS1YMR240C KRE28Q04431 385 aa3.34□□□□□ -1.87
CUS1YMR240C YDR222WQ04925 415 aa3.34□□□□□ -1.87
CUS1YMR240C YLR283WQ05867 314 aa3.34□□□□□ -1.87
CUS1YMR240C PRR2Q12310 699 aa3.34□□□□□ -1.87
CUS1YMR240C COS2P0CX12 379 aa3.33□□□□□ -1.88
CUS1YMR240C COS3P0CX13 379 aa3.33□□□□□ -1.88
CUS1YMR240C YCR016WP25617 290 aaKnown RBP3.33□□□□□ -1.88
CUS1YMR240C FMT1P32785 401 aa3.33□□□□□ -1.88
CUS1YMR240C BMH2P34730 273 aaKnown RBP3.33□□□□□ -1.88
CUS1YMR240C CSG2P35206 410 aa3.33□□□□□ -1.88
CUS1YMR240C PRY2P36110 329 aa3.33□□□□□ -1.88
CUS1YMR240C GTO3Q04806 366 aa3.33□□□□□ -1.88
CUS1YMR240C PEX10Q05568 337 aa3.33□□□□□ -1.88
CUS1YMR240C YPR063CQ12160 140 aa3.33□□□□□ -1.88
CUS1YMR240C RFM1Q12192 310 aa3.33□□□□□ -1.88
CUS1YMR240C FAB1P34756 2278 aa3.32□□□□□ -1.88
CUS1YMR240C POX1P13711 748 aa3.32□□□□□ -1.88
CUS1YMR240C ARC19P33204 171 aaKnown RBP3.32□□□□□ -1.88
CUS1YMR240C JEN1P36035 616 aa3.32□□□□□ -1.88
CUS1YMR240C SUR2P38992 349 aa3.32□□□□□ -1.88
CUS1YMR240C YER034WP40022 185 aaKnown RBP3.32□□□□□ -1.88
CUS1YMR240C YIL059CP40520 121 aa3.32□□□□□ -1.88
CUS1YMR240C PGA2P53903 129 aa3.32□□□□□ -1.88
CUS1YMR240C AAH1P53909 347 aa3.32□□□□□ -1.88
CUS1YMR240C ASI3P53983 676 aa3.32□□□□□ -1.88
CUS1YMR240C ATG17Q06410 417 aa3.32□□□□□ -1.88
CUS1YMR240C YPL150WQ12152 901 aa3.32□□□□□ -1.88
CUS1YMR240C EHD3P28817 500 aa3.31□□□□□ -1.88
CUS1YMR240C AGA2P32781 87 aa3.31□□□□□ -1.88
CUS1YMR240C ARN2P38724 620 aa3.31□□□□□ -1.88
CUS1YMR240C ECM14P38836 430 aa3.31□□□□□ -1.88
CUS1YMR240C SPL2P38839 148 aa3.31□□□□□ -1.88
CUS1YMR240C YER085CP40058 173 aa3.31□□□□□ -1.88
CUS1YMR240C ECO1P43605 281 aa3.31□□□□□ -1.88
CUS1YMR240C OST3P48439 350 aa3.31□□□□□ -1.88
CUS1YMR240C USE1P53146 245 aa3.31□□□□□ -1.88
CUS1YMR240C YPL039WQ03080 316 aa3.31□□□□□ -1.88
CUS1YMR240C ZWF1P11412 505 aaKnown RBP3.3□□□□□ -1.88
CUS1YMR240C KSS1P14681 368 aa3.3□□□□□ -1.88
CUS1YMR240C SIP3P38717 1229 aa3.3□□□□□ -1.88
CUS1YMR240C RTR1P40084 226 aaPredicted RBP3.3□□□□□ -1.88
CUS1YMR240C MSS2P40990 351 aa3.3□□□□□ -1.88
CUS1YMR240C PFS2P42841 465 aaKnown RBP3.3□□□□□ -1.88
CUS1YMR240C SSQ1Q05931 657 aaPredicted RBP3.3□□□□□ -1.88
CUS1YMR240C PLB3Q08108 686 aa3.3□□□□□ -1.88
CUS1YMR240C YCT1Q12235 531 aa3.3□□□□□ -1.88
CUS1YMR240C ISD11Q6Q560 94 aa3.3□□□□□ -1.88
CUS1YMR240C TDH2P00358 332 aaKnown RBP3.29□□□□□ -1.88
CUS1YMR240C SRB4P32569 687 aa3.29□□□□□ -1.88
CUS1YMR240C TKL2P33315 681 aa3.29□□□□□ -1.88
CUS1YMR240C FZO1P38297 855 aa3.29□□□□□ -1.88
CUS1YMR240C BUD13P46947 266 aaPredicted RBP3.29□□□□□ -1.88
CUS1YMR240C CPR7P47103 393 aa3.29□□□□□ -1.88
CUS1YMR240C HOC1P47124 396 aa3.29□□□□□ -1.88
CUS1YMR240C RAD17P48581 401 aa3.29□□□□□ -1.88
CUS1YMR240C MYO5Q04439 1219 aaKnown RBP3.29□□□□□ -1.88
CUS1YMR240C YPR098CQ06089 161 aa3.29□□□□□ -1.88
CUS1YMR240C YPR195CQ06594 109 aa3.29□□□□□ -1.88
CUS1YMR240C COQ10Q08058 207 aa3.29□□□□□ -1.88
CUS1YMR240C YPS3Q12303 508 aa3.29□□□□□ -1.88
CUS1YMR240C YBL112CQ3E7Y4 105 aa3.29□□□□□ -1.88
CUS1YMR240C CFT1Q06632 1357 aaKnown RBP3.28□□□□□ -1.88
CUS1YMR240C YEL009C-AA0A023PZF2 135 aa3.28□□□□□ -1.88
CUS1YMR240C RPS23AP0CX29 145 aaKnown RBP3.28□□□□□ -1.88
CUS1YMR240C RPS23BP0CX30 145 aa3.28□□□□□ -1.88
CUS1YMR240C RPO26P20435 155 aa3.28□□□□□ -1.88
CUS1YMR240C RPS5P26783 225 aaKnown RBP3.28□□□□□ -1.88
CUS1YMR240C BMH1P29311 267 aaKnown RBP3.28□□□□□ -1.88
CUS1YMR240C LDB7P38210 180 aa3.28□□□□□ -1.88
CUS1YMR240C YBR096WP38256 230 aa3.28□□□□□ -1.88
CUS1YMR240C ALG9P53868 555 aaKnown RBP3.28□□□□□ -1.88
CUS1YMR240C CTF19Q02732 369 aa3.28□□□□□ -1.88
CUS1YMR240C SNU23Q12368 194 aaPredicted RBP3.28□□□□□ -1.88
CUS1YMR240C GIS3Q12418 502 aa3.28□□□□□ -1.88
CUS1YMR240C PAN1P32521 1480 aa3.28□□□□□ -1.88
CUS1YMR240C TCP1P12612 559 aaKnown RBP3.27□□□□□ -1.89
CUS1YMR240C ASF2P32448 525 aaPredicted RBP3.27□□□□□ -1.89
CUS1YMR240C OTU1P43558 301 aa3.27□□□□□ -1.89
CUS1YMR240C YJR079WP47126 109 aa3.27□□□□□ -1.89
CUS1YMR240C JHD2P47156 728 aaPredicted RBP3.27□□□□□ -1.89
CUS1YMR240C MIG2P53035 382 aa3.27□□□□□ -1.89
CUS1YMR240C MRPS17Q03246 237 aaPredicted RBP3.27□□□□□ -1.89
CUS1YMR240C YMR166CQ03829 368 aa3.27□□□□□ -1.89
CUS1YMR240C YPR147CQ06522 304 aaKnown RBP3.27□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 30.3 ms