RNA–Protein interactions for RNA: YLR229C

CDC42, Transcript of Small rho-like GTPase, yeastyeast

Gene CDC42, Length 576 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC42YLR229C YGR026WP53217 278 aa3.99□□□□□ -1.77
CDC42YLR229C MTQ1P53944 314 aa3.99□□□□□ -1.77
CDC42YLR229C YCL001W-AP87012 153 aa3.99□□□□□ -1.77
CDC42YLR229C CAC2Q04199 468 aa3.99□□□□□ -1.77
CDC42YLR229C UTP15Q04305 513 aaKnown RBP3.99□□□□□ -1.77
CDC42YLR229C YML096WQ04489 525 aa3.99□□□□□ -1.77
CDC42YLR229C MRPL35Q06678 367 aa3.99□□□□□ -1.77
CDC42YLR229C LUC7Q07508 261 aaPredicted RBP3.99□□□□□ -1.77
CDC42YLR229C YEH1Q07804 573 aa3.99□□□□□ -1.77
CDC42YLR229C ATG41Q12048 136 aa3.99□□□□□ -1.77
CDC42YLR229C BSC1Q12140 328 aa3.99□□□□□ -1.77
CDC42YLR229C TPO4Q12256 659 aa3.99□□□□□ -1.77
CDC42YLR229C STT4P37297 1900 aa3.99□□□□□ -1.77
CDC42YLR229C CAR2P07991 424 aaKnown RBP3.98□□□□□ -1.77
CDC42YLR229C DPM1P14020 267 aaKnown RBP3.98□□□□□ -1.77
CDC42YLR229C RPB5P20434 215 aa3.98□□□□□ -1.77
CDC42YLR229C APA2P22108 325 aa3.98□□□□□ -1.77
CDC42YLR229C RPA135P22138 1203 aaKnown RBP3.98□□□□□ -1.77
CDC42YLR229C IFM1P25038 676 aa3.98□□□□□ -1.77
CDC42YLR229C PBN1P25580 416 aa3.98□□□□□ -1.77
CDC42YLR229C SUA5P32579 426 aa3.98□□□□□ -1.77
CDC42YLR229C VAM7P32912 316 aa3.98□□□□□ -1.77
CDC42YLR229C MSN2P33748 704 aa3.98□□□□□ -1.77
CDC42YLR229C SRX1P36077 127 aa3.98□□□□□ -1.77
CDC42YLR229C APD1P38281 316 aa3.98□□□□□ -1.77
CDC42YLR229C EHT1P38295 451 aa3.98□□□□□ -1.77
CDC42YLR229C YHR122WP38829 231 aa3.98□□□□□ -1.77
CDC42YLR229C PFS1P38872 237 aa3.98□□□□□ -1.77
CDC42YLR229C LNP1P38878 278 aa3.98□□□□□ -1.77
CDC42YLR229C FET3P38993 636 aa3.98□□□□□ -1.77
CDC42YLR229C LYS1P38998 373 aaRIP-Chip data3.98□□□□□ -1.77not detected
CDC42YLR229C ELO1P39540 310 aa3.98□□□□□ -1.77
CDC42YLR229C LRO1P40345 661 aa3.98□□□□□ -1.77
CDC42YLR229C YIL024CP40543 189 aa3.98□□□□□ -1.77
CDC42YLR229C RPL10P41805 221 aaKnown RBP3.98□□□□□ -1.77
CDC42YLR229C HXT14P42833 540 aa3.98□□□□□ -1.77
CDC42YLR229C CDH1P53197 566 aa3.98□□□□□ -1.77
CDC42YLR229C ERV25P54837 211 aaKnown RBP3.98□□□□□ -1.77
CDC42YLR229C EGD1Q02642 157 aaKnown RBP3.98□□□□□ -1.77
CDC42YLR229C PEX25Q02969 394 aa3.98□□□□□ -1.77
CDC42YLR229C ODC1Q03028 310 aa3.98□□□□□ -1.77
CDC42YLR229C OST6Q03723 332 aa3.98□□□□□ -1.77
CDC42YLR229C TRI1Q05024 226 aa3.98□□□□□ -1.77
CDC42YLR229C SDO1Q07953 250 aaKnown RBP3.98□□□□□ -1.77
CDC42YLR229C FDH1Q08911 376 aa3.98□□□□□ -1.77
CDC42YLR229C MMT2Q08970 484 aa3.98□□□□□ -1.77
CDC42YLR229C TIR4Q12218 487 aaPredicted RBP3.98□□□□□ -1.77
CDC42YLR229C DCN1Q12395 269 aa3.98□□□□□ -1.77
CDC42YLR229C YDL007C-AQ2V2Q0 85 aa3.98□□□□□ -1.77
CDC42YLR229C VMA9Q3E7B6 73 aa3.98□□□□□ -1.77
CDC42YLR229C TFB5Q3E7C1 72 aaPredicted RBP3.98□□□□□ -1.77
CDC42YLR229C CCH1P50077 2039 aa3.97□□□□□ -1.77
CDC42YLR229C COX9P07255 59 aa3.97□□□□□ -1.77
CDC42YLR229C PUT1P09368 476 aa3.97□□□□□ -1.77
CDC42YLR229C NAM2P11325 894 aa3.97□□□□□ -1.77
CDC42YLR229C HOM2P13663 365 aaKnown RBP3.97□□□□□ -1.77
CDC42YLR229C CBS1P14066 229 aa3.97□□□□□ -1.77
CDC42YLR229C MCK1P21965 375 aaKnown RBP3.97□□□□□ -1.77
CDC42YLR229C PTP1P25044 335 aa3.97□□□□□ -1.77
CDC42YLR229C YCP4P25349 247 aaKnown RBP3.97□□□□□ -1.77
CDC42YLR229C MRP20P32387 263 aa3.97□□□□□ -1.77
CDC42YLR229C SRB5P32585 307 aa3.97□□□□□ -1.77
CDC42YLR229C ORC2P32833 620 aa3.97□□□□□ -1.77
CDC42YLR229C MOH1P38191 138 aa3.97□□□□□ -1.77
CDC42YLR229C WSC4P38739 605 aa3.97□□□□□ -1.77
CDC42YLR229C YJL193WP39542 402 aa3.97□□□□□ -1.77
CDC42YLR229C LSM4P40070 187 aaKnown RBP3.97□□□□□ -1.77
CDC42YLR229C PMT6P42934 759 aa3.97□□□□□ -1.77
CDC42YLR229C UBX6P47049 396 aa3.97□□□□□ -1.77
CDC42YLR229C TAD2P47058 250 aa3.97□□□□□ -1.77
CDC42YLR229C VPS73P53142 486 aaKnown RBP3.97□□□□□ -1.77
CDC42YLR229C MEP3P53390 489 aa3.97□□□□□ -1.77
CDC42YLR229C INN1P53901 409 aa3.97□□□□□ -1.77
CDC42YLR229C SWS2P53937 143 aa3.97□□□□□ -1.77
CDC42YLR229C YVH1Q02256 364 aaKnown RBP3.97□□□□□ -1.77
CDC42YLR229C NAT4Q04751 285 aa3.97□□□□□ -1.77
CDC42YLR229C HOF1Q05080 669 aa3.97□□□□□ -1.77
CDC42YLR229C KEI1Q06346 221 aa3.97□□□□□ -1.77
CDC42YLR229C YPR091CQ06833 770 aa3.97□□□□□ -1.77
CDC42YLR229C IZH3Q07959 543 aa3.97□□□□□ -1.77
CDC42YLR229C FCF2Q12035 217 aaPredicted RBP3.97□□□□□ -1.77
CDC42YLR229C LYS21Q12122 440 aaKnown RBP3.97□□□□□ -1.77
CDC42YLR229C LEU9Q12166 604 aaKnown RBP3.97□□□□□ -1.77
CDC42YLR229C DGK1Q12382 290 aa3.97□□□□□ -1.77
CDC42YLR229C YOS9Q99220 542 aa3.97□□□□□ -1.77
CDC42YLR229C ISN1Q99312 450 aa3.97□□□□□ -1.77
CDC42YLR229C UBI4P0CG63 381 aaKnown RBP3.96□□□□□ -1.78
CDC42YLR229C RPL40AP0CH08 128 aaKnown RBP3.96□□□□□ -1.78
CDC42YLR229C RPL40BP0CH09 128 aaKnown RBP3.96□□□□□ -1.78
CDC42YLR229C SEC59P20048 519 aa3.96□□□□□ -1.78
CDC42YLR229C ATS1P31386 333 aa3.96□□□□□ -1.78
CDC42YLR229C SFK1P35735 353 aa3.96□□□□□ -1.78
CDC42YLR229C THI2P38141 450 aa3.96□□□□□ -1.78
CDC42YLR229C SRO77P38163 1010 aa3.96□□□□□ -1.78
CDC42YLR229C YPC1P38298 316 aa3.96□□□□□ -1.78
CDC42YLR229C MTC4P38335 694 aaKnown RBP3.96□□□□□ -1.78
CDC42YLR229C CHS7P38843 316 aa3.96□□□□□ -1.78
CDC42YLR229C MNL1P38888 796 aa3.96□□□□□ -1.78
CDC42YLR229C VPS52P39904 641 aa3.96□□□□□ -1.78
CDC42YLR229C ICE2P40499 491 aa3.96□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 170.8 ms