RNA–Protein interactions for RNA: YLR062C

BUD28, Transcript of Dubious open reading frame, yeastyeast

Gene BUD28, Length 378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD28YLR062C REP1P03871 373 aa4.3□□□□□ -1.72
BUD28YLR062C ARO3P14843 370 aaKnown RBP4.3□□□□□ -1.72
BUD28YLR062C HNM1P19807 563 aa4.3□□□□□ -1.72
BUD28YLR062C IDP1P21954 428 aaKnown RBP4.3□□□□□ -1.72
BUD28YLR062C NDC1P32500 655 aa4.3□□□□□ -1.72
BUD28YLR062C PRP21P32524 280 aaPredicted RBP4.3□□□□□ -1.72
BUD28YLR062C SHE1P38200 338 aa4.3□□□□□ -1.72
BUD28YLR062C FAT1P38225 669 aa4.3□□□□□ -1.72
BUD28YLR062C MDM31P38880 579 aa4.3□□□□□ -1.72
BUD28YLR062C GLR1P41921 483 aaKnown RBP4.3□□□□□ -1.72
BUD28YLR062C CTK2P46962 323 aa4.3□□□□□ -1.72
BUD28YLR062C VMA10P48836 114 aaKnown RBP4.3□□□□□ -1.72
BUD28YLR062C MOT3P54785 490 aaKnown RBP4.3□□□□□ -1.72
BUD28YLR062C HHT1P61830 136 aa4.3□□□□□ -1.72
BUD28YLR062C DIG2Q03373 323 aaKnown RBP4.3□□□□□ -1.72
BUD28YLR062C FIN1Q03898 291 aa4.3□□□□□ -1.72
BUD28YLR062C YMR087WQ04299 284 aa4.3□□□□□ -1.72
BUD28YLR062C RNH1Q04740 348 aa4.3□□□□□ -1.72
BUD28YLR062C RDL1Q12305 139 aaKnown RBP4.3□□□□□ -1.72
BUD28YLR062C MES1P00958 751 aaKnown RBP4.29□□□□□ -1.72
BUD28YLR062C MSI1P13712 422 aa4.29□□□□□ -1.72
BUD28YLR062C SSE2P32590 693 aaKnown RBP4.29□□□□□ -1.72
BUD28YLR062C MCH2P36032 473 aa4.29□□□□□ -1.72
BUD28YLR062C FRM2P37261 193 aa4.29□□□□□ -1.72
BUD28YLR062C DTR1P38125 572 aa4.29□□□□□ -1.72
BUD28YLR062C YHR035WP38769 630 aa4.29□□□□□ -1.72
BUD28YLR062C ARO9P38840 513 aaPredicted RBP4.29□□□□□ -1.72
BUD28YLR062C EGD2P38879 174 aaKnown RBP4.29□□□□□ -1.72
BUD28YLR062C SDP1P40479 209 aa4.29□□□□□ -1.72
BUD28YLR062C TIR3P40552 269 aa4.29□□□□□ -1.72
BUD28YLR062C CCC1P47818 322 aa4.29□□□□□ -1.72
BUD28YLR062C GNP1P48813 663 aa4.29□□□□□ -1.72
BUD28YLR062C SLD3P53135 668 aa4.29□□□□□ -1.72
BUD28YLR062C TYW3P53177 273 aa4.29□□□□□ -1.72
BUD28YLR062C SAM50P53969 484 aa4.29□□□□□ -1.72
BUD28YLR062C MSS11Q03825 758 aa4.29□□□□□ -1.72
BUD28YLR062C GMC1Q04399 608 aa4.29□□□□□ -1.72
BUD28YLR062C ARP10Q04549 284 aa4.29□□□□□ -1.72
BUD28YLR062C SSK1Q07084 712 aa4.29□□□□□ -1.72
BUD28YLR062C YOR378WQ08902 515 aa4.29□□□□□ -1.72
BUD28YLR062C RKM1Q08961 583 aaPredicted RBP4.29□□□□□ -1.72
BUD28YLR062C THP3Q12049 470 aaKnown RBP4.29□□□□□ -1.72
BUD28YLR062C YGL041W-AP0C5N3 154 aa4.28□□□□□ -1.72
BUD28YLR062C YML003WP0CF16 290 aa4.28□□□□□ -1.72
BUD28YLR062C NAM2P11325 894 aa4.28□□□□□ -1.72
BUD28YLR062C PUT3P25502 979 aaPredicted RBP4.28□□□□□ -1.72
BUD28YLR062C DEG1P31115 442 aaKnown RBP4.28□□□□□ -1.72
BUD28YLR062C DUT1P33317 147 aa4.28□□□□□ -1.72
BUD28YLR062C BAP2P38084 609 aa4.28□□□□□ -1.72
BUD28YLR062C THI2P38141 450 aa4.28□□□□□ -1.72
BUD28YLR062C YLF2P38746 405 aa4.28□□□□□ -1.72
BUD28YLR062C MSS4P38994 779 aa4.28□□□□□ -1.72
BUD28YLR062C ATF1P40353 525 aa4.28□□□□□ -1.72
BUD28YLR062C ABM1P47146 123 aa4.28□□□□□ -1.72
BUD28YLR062C MTL1P53214 551 aa4.28□□□□□ -1.72
BUD28YLR062C YDC1Q02896 317 aa4.28□□□□□ -1.72
BUD28YLR062C GPI17Q04080 534 aa4.28□□□□□ -1.72
BUD28YLR062C DLT1Q04216 342 aa4.28□□□□□ -1.72
BUD28YLR062C GAL83Q04739 417 aa4.28□□□□□ -1.72
BUD28YLR062C YLR173WQ06247 608 aa4.28□□□□□ -1.72
BUD28YLR062C TPO3Q06451 622 aa4.28□□□□□ -1.72
BUD28YLR062C MED7Q08278 222 aa4.28□□□□□ -1.72
BUD28YLR062C FRE3Q08905 711 aa4.28□□□□□ -1.72
BUD28YLR062C FRE8Q12209 686 aa4.28□□□□□ -1.72
BUD28YLR062C YGK3Q12222 375 aaPredicted RBP4.28□□□□□ -1.72
BUD28YLR062C ISA2Q12425 185 aa4.28□□□□□ -1.72
BUD28YLR062C NOP56Q12460 504 aaKnown RBP RIP-Chip data4.28□□□□□ -1.72not detected
BUD28YLR062C VCX1Q99385 411 aa4.28□□□□□ -1.72
BUD28YLR062C CYC7P00045 113 aa4.27□□□□□ -1.73
BUD28YLR062C SOD2P00447 233 aa4.27□□□□□ -1.73
BUD28YLR062C RPL39P04650 51 aa4.27□□□□□ -1.73
BUD28YLR062C RPL15AP05748 204 aaKnown RBP4.27□□□□□ -1.73
BUD28YLR062C RPB9P27999 122 aa4.27□□□□□ -1.73
BUD28YLR062C REC114P32841 428 aa4.27□□□□□ -1.73
BUD28YLR062C SDS22P36047 338 aa4.27□□□□□ -1.73
BUD28YLR062C ANR2P36090 516 aaPredicted RBP4.27□□□□□ -1.73
BUD28YLR062C YKR015CP36111 568 aa4.27□□□□□ -1.73
BUD28YLR062C PEX32P38292 413 aa4.27□□□□□ -1.73
BUD28YLR062C CTR2P38865 189 aa4.27□□□□□ -1.73
BUD28YLR062C YJL016WP47072 561 aa4.27□□□□□ -1.73
BUD28YLR062C HNT2P49775 206 aa4.27□□□□□ -1.73
BUD28YLR062C PHB2P50085 310 aa4.27□□□□□ -1.73
BUD28YLR062C PXR1P53335 271 aaPredicted RBP4.27□□□□□ -1.73
BUD28YLR062C YNR048WP53740 393 aa4.27□□□□□ -1.73
BUD28YLR062C AAH1P53909 347 aa4.27□□□□□ -1.73
BUD28YLR062C RPL15BP54780 204 aaPredicted RBP4.27□□□□□ -1.73
BUD28YLR062C TLG1Q03322 224 aa4.27□□□□□ -1.73
BUD28YLR062C RBS1Q05672 457 aaKnown RBP4.27□□□□□ -1.73
BUD28YLR062C YPR098CQ06089 161 aa4.27□□□□□ -1.73
BUD28YLR062C TGS1Q12052 315 aa4.27□□□□□ -1.73
BUD28YLR062C USB1Q12208 290 aaKnown RBP4.27□□□□□ -1.73
BUD28YLR062C YLR108CQ12259 485 aa4.27□□□□□ -1.73
BUD28YLR062C TRM10Q12400 293 aa4.27□□□□□ -1.73
BUD28YLR062C YCL048W-AQ2V2Q2 79 aa4.27□□□□□ -1.73
BUD28YLR062C YER145C-AA0A023PYF4 145 aa4.26□□□□□ -1.73
BUD28YLR062C CCW14O13547 238 aa4.26□□□□□ -1.73
BUD28YLR062C RPL30P14120 105 aaKnown RBP4.26□□□□□ -1.73
BUD28YLR062C APA2P22108 325 aa4.26□□□□□ -1.73
BUD28YLR062C YOX1P34161 385 aa4.26□□□□□ -1.73
BUD28YLR062C ECM4P36156 370 aa4.26□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 69.8 ms