RNA–Protein interactions for RNA: YJL104W

PAM16, Transcript of Subunit of the import motor (PAM complex), yeast

Gene PAM16, Length 450 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAM16	YJL104W	FIT3	Q08907	204 aa		0.78	□□□□□ -2.28
PAM16	YJL104W	NIP7	Q08962	181 aa	Known RBP	0.78	□□□□□ -2.28
PAM16	YJL104W	PST1	Q12355	444 aa		0.78	□□□□□ -2.28
PAM16	YJL104W	YCL012C	Q8J0M4	134 aa		0.78	□□□□□ -2.28
PAM16	YJL104W	ADH1	P00330	348 aa	Known RBP	0.77	□□□□□ -2.29
PAM16	YJL104W	MES1	P00958	751 aa	Known RBP	0.77	□□□□□ -2.29
PAM16	YJL104W	SGA1	P08019	549 aa		0.77	□□□□□ -2.29
PAM16	YJL104W	TRX2	P22803	104 aa	Known RBP	0.77	□□□□□ -2.29
PAM16	YJL104W	RAD57	P25301	460 aa		0.77	□□□□□ -2.29
PAM16	YJL104W	GIT1	P25346	518 aa		0.77	□□□□□ -2.29
PAM16	YJL104W	URA10	P30402	227 aa		0.77	□□□□□ -2.29
PAM16	YJL104W	HYM1	P32464	399 aa		0.77	□□□□□ -2.29
PAM16	YJL104W	SMI1	P32566	505 aa		0.77	□□□□□ -2.29
PAM16	YJL104W	SSE2	P32590	693 aa	Known RBP	0.77	□□□□□ -2.29
PAM16	YJL104W	RAD23	P32628	398 aa	Known RBP	0.77	□□□□□ -2.29
PAM16	YJL104W	PTC1	P35182	281 aa		0.77	□□□□□ -2.29
PAM16	YJL104W	BLI1	P35727	113 aa		0.77	□□□□□ -2.29
PAM16	YJL104W	BYE1	P36106	594 aa		0.77	□□□□□ -2.29
PAM16	YJL104W	YCR087C-A	P37263	153 aa		0.77	□□□□□ -2.29
PAM16	YJL104W	YBR096W	P38256	230 aa		0.77	□□□□□ -2.29
PAM16	YJL104W	NOP16	P40007	231 aa	Known RBP	0.77	□□□□□ -2.29
PAM16	YJL104W	ISC1	P40015	477 aa	Known RBP	0.77	□□□□□ -2.29
PAM16	YJL104W	SCC4	P40090	624 aa		0.77	□□□□□ -2.29
PAM16	YJL104W	NSA1	P53136	463 aa	Predicted RBP	0.77	□□□□□ -2.29
PAM16	YJL104W	RMD9	P53140	646 aa	Known RBP	0.77	□□□□□ -2.29
PAM16	YJL104W	YGR017W	P53210	297 aa		0.77	□□□□□ -2.29
PAM16	YJL104W	YGR018C	P53211	109 aa		0.77	□□□□□ -2.29
PAM16	YJL104W	COS6	P53344	381 aa		0.77	□□□□□ -2.29
PAM16	YJL104W	MPA43	P53583	542 aa	Predicted RBP	0.77	□□□□□ -2.29
PAM16	YJL104W	RCF2	P53721	224 aa		0.77	□□□□□ -2.29
PAM16	YJL104W	DBP6	P53734	629 aa	Known RBP	0.77	□□□□□ -2.29
PAM16	YJL104W	HXT11	P54862	567 aa		0.77	□□□□□ -2.29
PAM16	YJL104W	MRPL13	Q02204	264 aa		0.77	□□□□□ -2.29
PAM16	YJL104W	SPP2	Q02521	185 aa		0.77	□□□□□ -2.29
PAM16	YJL104W	SNX41	Q04053	625 aa		0.77	□□□□□ -2.29
PAM16	YJL104W	GRH1	Q04410	372 aa	Known RBP	0.77	□□□□□ -2.29
PAM16	YJL104W	API2	Q04413	109 aa		0.77	□□□□□ -2.29
PAM16	YJL104W	SPG4	Q04438	115 aa		0.77	□□□□□ -2.29
PAM16	YJL104W	ATG38	Q05789	226 aa	Known RBP	0.77	□□□□□ -2.29
PAM16	YJL104W	HOR7	Q05827	59 aa		0.77	□□□□□ -2.29
PAM16	YJL104W	RRG8	Q06109	277 aa		0.77	□□□□□ -2.29
PAM16	YJL104W	CTS2	Q06350	511 aa		0.77	□□□□□ -2.29
PAM16	YJL104W	PRM3	Q08931	133 aa		0.77	□□□□□ -2.29
PAM16	YJL104W	NMD4	Q12129	218 aa		0.77	□□□□□ -2.29
PAM16	YJL104W	YPL150W	Q12152	901 aa		0.77	□□□□□ -2.29
PAM16	YJL104W	YPL245W	Q12179	454 aa	Known RBP	0.77	□□□□□ -2.29
PAM16	YJL104W	RPN5	Q12250	445 aa	Known RBP	0.77	□□□□□ -2.29
PAM16	YJL104W	RGS2	Q99188	309 aa		0.77	□□□□□ -2.29
PAM16	YJL104W	RPL39	P04650	51 aa		0.76	□□□□□ -2.29
PAM16	YJL104W	MSW1	P04803	379 aa		0.76	□□□□□ -2.29
PAM16	YJL104W	ARG3	P05150	338 aa		0.76	□□□□□ -2.29
PAM16	YJL104W	MET17	P06106	444 aa		0.76	□□□□□ -2.29
PAM16	YJL104W	RAD1	P06777	1100 aa		0.76	□□□□□ -2.29
PAM16	YJL104W	SPS4	P09937	338 aa		0.76	□□□□□ -2.29
PAM16	YJL104W	AAC3	P18238	307 aa		0.76	□□□□□ -2.29
PAM16	YJL104W	DBP3	P20447	523 aa	Known RBP	0.76	□□□□□ -2.29
PAM16	YJL104W	SAG1	P20840	650 aa		0.76	□□□□□ -2.29
PAM16	YJL104W	TOM40	P23644	387 aa	Known RBP	0.76	□□□□□ -2.29
PAM16	YJL104W	CTR86	P25355	563 aa		0.76	□□□□□ -2.29
PAM16	YJL104W	TRX3	P25372	127 aa		0.76	□□□□□ -2.29
PAM16	YJL104W	STP22	P25604	385 aa		0.76	□□□□□ -2.29
PAM16	YJL104W	MRP20	P32387	263 aa		0.76	□□□□□ -2.29
PAM16	YJL104W	SUR1	P33300	382 aa		0.76	□□□□□ -2.29
PAM16	YJL104W	YKR015C	P36111	568 aa		0.76	□□□□□ -2.29
PAM16	YJL104W	ECM31	P38122	312 aa		0.76	□□□□□ -2.29
PAM16	YJL104W	RFT1	P38206	574 aa	Predicted RBP	0.76	□□□□□ -2.29
PAM16	YJL104W	RTC2	P38279	296 aa		0.76	□□□□□ -2.29
PAM16	YJL104W	POP4	P38336	279 aa		0.76	□□□□□ -2.29
PAM16	YJL104W	SBE22	P38814	852 aa		0.76	□□□□□ -2.29
PAM16	YJL104W	YHR177W	P38867	453 aa		0.76	□□□□□ -2.29
PAM16	YJL104W	LYS12	P40495	371 aa	Known RBP	0.76	□□□□□ -2.29
PAM16	YJL104W	MRPL49	P40858	161 aa	Predicted RBP	0.76	□□□□□ -2.29
PAM16	YJL104W	GCN20	P43535	752 aa	Known RBP	0.76	□□□□□ -2.29
PAM16	YJL104W	FMP32	P43557	207 aa		0.76	□□□□□ -2.29
PAM16	YJL104W	ARC1	P46672	376 aa	Known RBP	0.76	□□□□□ -2.29
PAM16	YJL104W	AIP1	P46680	615 aa	Known RBP	0.76	□□□□□ -2.29
PAM16	YJL104W	GCD14	P46959	383 aa	Predicted RBP	0.76	□□□□□ -2.29
PAM16	YJL104W	AIM22	P47051	409 aa		0.76	□□□□□ -2.29
PAM16	YJL104W	YJL016W	P47072	561 aa		0.76	□□□□□ -2.29
PAM16	YJL104W	HAM1	P47119	197 aa	Known RBP	0.76	□□□□□ -2.29
PAM16	YJL104W	EFM3	P47163	339 aa		0.76	□□□□□ -2.29
PAM16	YJL104W	YIP1	P53039	248 aa		0.76	□□□□□ -2.29
PAM16	YJL104W	YPL067C	Q02754	198 aa		0.76	□□□□□ -2.29
PAM16	YJL104W	MET31	Q03081	177 aa		0.76	□□□□□ -2.29
PAM16	YJL104W	ABZ2	Q03266	374 aa		0.76	□□□□□ -2.29
PAM16	YJL104W	DIG2	Q03373	323 aa	Known RBP	0.76	□□□□□ -2.29
PAM16	YJL104W	GOT1	Q03554	138 aa		0.76	□□□□□ -2.29
PAM16	YJL104W	GPI17	Q04080	534 aa		0.76	□□□□□ -2.29
PAM16	YJL104W	YDR387C	Q04162	555 aa		0.76	□□□□□ -2.29
PAM16	YJL104W	URH1	Q04179	340 aa		0.76	□□□□□ -2.29
PAM16	YJL104W	PEX12	Q04370	399 aa		0.76	□□□□□ -2.29
PAM16	YJL104W	SEC10	Q06245	871 aa		0.76	□□□□□ -2.29
PAM16	YJL104W	ARR2	Q06597	130 aa		0.76	□□□□□ -2.29
PAM16	YJL104W	MDM36	Q06820	579 aa		0.76	□□□□□ -2.29
PAM16	YJL104W	BRX1	Q08235	291 aa	Known RBP	0.76	□□□□□ -2.29
PAM16	YJL104W	IZH2	Q12442	317 aa		0.76	□□□□□ -2.29
PAM16	YJL104W	FRE6	Q12473	712 aa		0.76	□□□□□ -2.29
PAM16	YJL104W	TDH2	P00358	332 aa	Known RBP	0.75	□□□□□ -2.29
PAM16	YJL104W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	0.75	□□□□□ -2.29	not detected
PAM16	YJL104W	REP2	P03872	296 aa		0.75	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 56.2 ms