RNA–Protein interactions for RNA: YJL089W

SIP4, Transcript of C6 zinc cluster transcriptional activator, yeast

Gene SIP4, Length 2,490 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIP4	YJL089W	PHO90	P39535	881 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	RRG9	P40156	214 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	GLR1	P41921	483 aa	Known RBP	0.98	□□□□□ -2.25
SIP4	YJL089W	IRC7	P43623	340 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	SFH5	P47008	294 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	YHC3	P47040	408 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	XPT1	P47165	209 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	VMA10	P48836	114 aa	Known RBP	0.98	□□□□□ -2.25
SIP4	YJL089W	PRM8	P53174	237 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	PEF1	P53238	335 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	NRK1	P53915	240 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	CIK1	Q01649	594 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	NUP49	Q02199	472 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	MRP51	Q02950	344 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	OST6	Q03723	332 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	YDR102C	Q03864	110 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	GPI17	Q04080	534 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	DLT1	Q04216	342 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	ASA1	Q06822	443 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	PRP11	Q07350	266 aa	Predicted RBP	0.98	□□□□□ -2.25
SIP4	YJL089W	GAT3	Q07928	141 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	HRT1	Q08273	121 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	OSW1	Q08692	278 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	MED2	Q12124	431 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	MCT1	Q12283	360 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	RTR2	Q12378	196 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	QCR7	P00128	127 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	SIR3	P06701	978 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	COX9	P07255	59 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	RPC40	P07703	335 aa	Known RBP	0.98	□□□□□ -2.25
SIP4	YJL089W	NFT1	P0CE68	1218 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	ATR1	P13090	542 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	MRPS28	P21771	286 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	IDP1	P21954	428 aa	Known RBP	0.98	□□□□□ -2.25
SIP4	YJL089W	HXT2	P23585	541 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	KRR1	P25586	316 aa	Predicted RBP	0.98	□□□□□ -2.25
SIP4	YJL089W	PPA2	P28239	310 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	VPH2	P32341	215 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	DAL3	P32459	195 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	GLC7	P32598	312 aa	Known RBP	0.98	□□□□□ -2.25
SIP4	YJL089W	VPS17	P32913	551 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	MTC2	P34246	357 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	ECM31	P38122	312 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	IPT1	P38954	527 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	SNL1	P40548	159 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	FMP33	P46998	180 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	UFD1	P53044	361 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	BRR6	P53062	197 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	COX18	P53239	316 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	SYF2	P53277	215 aa	Predicted RBP	0.98	□□□□□ -2.25
SIP4	YJL089W	RRN9	P53437	365 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	BUD17	P53727	317 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	YNR064C	P53750	290 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	YPL108W	Q02872	168 aa	Predicted RBP	0.98	□□□□□ -2.25
SIP4	YJL089W	TLG1	Q03322	224 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	YDR248C	Q03786	193 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	GAL83	Q04739	417 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	YMR254C	Q04838	102 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	YMR315W	Q04869	349 aa	Known RBP	0.98	□□□□□ -2.25
SIP4	YJL089W	SPR28	Q04921	423 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	YMR226C	Q05016	267 aa	Known RBP	0.98	□□□□□ -2.25
SIP4	YJL089W	MRX8	Q05473	314 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	ARR2	Q06597	130 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	TSR2	Q06672	205 aa	Known RBP	0.98	□□□□□ -2.25
SIP4	YJL089W	SWA2	Q06677	668 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	AIM6	Q07716	390 aa		0.98	□□□□□ -2.25
SIP4	YJL089W	TIM9	O74700	87 aa		0.97	□□□□□ -2.25
SIP4	YJL089W	MES1	P00958	751 aa	Known RBP	0.97	□□□□□ -2.25
SIP4	YJL089W	SGA1	P08019	549 aa		0.97	□□□□□ -2.25
SIP4	YJL089W	RPS8A	P0CX39	200 aa	Known RBP	0.97	□□□□□ -2.25
SIP4	YJL089W	RPS8B	P0CX40	200 aa	Known RBP	0.97	□□□□□ -2.25
SIP4	YJL089W	SNF4	P12904	322 aa		0.97	□□□□□ -2.25
SIP4	YJL089W	RPL30	P14120	105 aa	Known RBP	0.97	□□□□□ -2.25
SIP4	YJL089W	RPA135	P22138	1203 aa	Known RBP	0.97	□□□□□ -2.25
SIP4	YJL089W	MEK1	P24719	497 aa	Predicted RBP	0.97	□□□□□ -2.25
SIP4	YJL089W	BOS1	P25385	244 aa		0.97	□□□□□ -2.25
SIP4	YJL089W	YCR101C	P25607	182 aa		0.97	□□□□□ -2.25
SIP4	YJL089W	PRP21	P32524	280 aa	Predicted RBP	0.97	□□□□□ -2.25
SIP4	YJL089W	SSE2	P32590	693 aa	Known RBP	0.97	□□□□□ -2.25
SIP4	YJL089W	DUT1	P33317	147 aa		0.97	□□□□□ -2.25
SIP4	YJL089W	TMA19	P35691	167 aa	Known RBP	0.97	□□□□□ -2.25
SIP4	YJL089W	SWD2	P36104	329 aa	Predicted RBP	0.97	□□□□□ -2.25
SIP4	YJL089W	FRM2	P37261	193 aa		0.97	□□□□□ -2.25
SIP4	YJL089W	ECM8	P38246	354 aa		0.97	□□□□□ -2.25
SIP4	YJL089W	LNP1	P38878	278 aa		0.97	□□□□□ -2.25
SIP4	YJL089W	OST1	P41543	476 aa	Known RBP	0.97	□□□□□ -2.25
SIP4	YJL089W	GZF3	P42944	551 aa	Known RBP	0.97	□□□□□ -2.25
SIP4	YJL089W	BNA6	P43619	295 aa		0.97	□□□□□ -2.25
SIP4	YJL089W	CTK2	P46962	323 aa		0.97	□□□□□ -2.25
SIP4	YJL089W	EFM3	P47163	339 aa		0.97	□□□□□ -2.25
SIP4	YJL089W	SLD3	P53135	668 aa		0.97	□□□□□ -2.25
SIP4	YJL089W	YGR016W	P53209	190 aa		0.97	□□□□□ -2.25
SIP4	YJL089W	IMO32	P53219	342 aa		0.97	□□□□□ -2.25
SIP4	YJL089W	PGA1	P53896	198 aa		0.97	□□□□□ -2.25
SIP4	YJL089W	YLR152C	P54072	576 aa		0.97	□□□□□ -2.25
SIP4	YJL089W	ARG5,6	Q01217	863 aa		0.97	□□□□□ -2.25
SIP4	YJL089W	YKR005C	Q02203	525 aa		0.97	□□□□□ -2.25
SIP4	YJL089W	HOT1	Q03213	719 aa		0.97	□□□□□ -2.25
SIP4	YJL089W	YMD8	Q03697	442 aa		0.97	□□□□□ -2.25
SIP4	YJL089W	SMP3	Q04174	516 aa		0.97	□□□□□ -2.25

Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms