RNA–Protein interactions for RNA: YIR017C

MET28, Transcript of bZIP transcriptional activator in the Cbf1p-Met4p-Met28p complex, yeastyeast

Gene MET28, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MET28YIR017C ASR1Q06834 288 aa8.48□□□□□ -1.05
MET28YIR017C PEX27Q08580 376 aa8.48□□□□□ -1.05
MET28YIR017C MES1P00958 751 aaKnown RBP8.47□□□□□ -1.05
MET28YIR017C SSA3P09435 649 aaKnown RBP8.47□□□□□ -1.05
MET28YIR017C PDA1P16387 420 aaKnown RBP8.47□□□□□ -1.05
MET28YIR017C RPI1P23250 407 aaKnown RBP8.47□□□□□ -1.05
MET28YIR017C TAT1P38085 619 aa8.47□□□□□ -1.05
MET28YIR017C MBA1P38300 278 aa8.47□□□□□ -1.05
MET28YIR017C YHL037CP38733 133 aa8.47□□□□□ -1.05
MET28YIR017C YMR144WP40214 342 aaKnown RBP8.47□□□□□ -1.05
MET28YIR017C QDR1P40475 563 aa8.47□□□□□ -1.05
MET28YIR017C AVT7P40501 490 aa8.47□□□□□ -1.05
MET28YIR017C SER2P42941 309 aa8.47□□□□□ -1.05
MET28YIR017C ERJ5P43613 295 aaPredicted RBP8.47□□□□□ -1.05
MET28YIR017C POP6P53218 158 aa8.47□□□□□ -1.05
MET28YIR017C YNR048WP53740 393 aa8.47□□□□□ -1.05
MET28YIR017C GPI17Q04080 534 aa8.47□□□□□ -1.05
MET28YIR017C NGL1Q08213 363 aaKnown RBP8.47□□□□□ -1.05
MET28YIR017C FIT3Q08907 204 aa8.47□□□□□ -1.05
MET28YIR017C ERG24P32462 438 aaKnown RBP8.46□□□□□ -1.06
MET28YIR017C SNC2P33328 115 aa8.46□□□□□ -1.06
MET28YIR017C ZRT3P34240 503 aa8.46□□□□□ -1.06
MET28YIR017C FCY21P40039 528 aa8.46□□□□□ -1.06
MET28YIR017C PIG2P40187 538 aa8.46□□□□□ -1.06
MET28YIR017C BNA6P43619 295 aa8.46□□□□□ -1.06
MET28YIR017C CTK2P46962 323 aa8.46□□□□□ -1.06
MET28YIR017C MTL1P53214 551 aa8.46□□□□□ -1.06
MET28YIR017C YMR130WQ04223 302 aa8.46□□□□□ -1.06
MET28YIR017C RGC1Q06108 1083 aaKnown RBP8.46□□□□□ -1.06
MET28YIR017C USB1Q12208 290 aaKnown RBP8.46□□□□□ -1.06
MET28YIR017C ISA2Q12425 185 aa8.46□□□□□ -1.06
MET28YIR017C AIR2Q12476 344 aaKnown RBP8.46□□□□□ -1.06
MET28YIR017C SEC16P48415 2195 aaKnown RBP8.45□□□□□ -1.06
MET28YIR017C CLB6P32943 380 aa8.45□□□□□ -1.06
MET28YIR017C MKS1P34072 584 aa8.45□□□□□ -1.06
MET28YIR017C PRS3P38689 320 aaKnown RBP8.45□□□□□ -1.06
MET28YIR017C CWC23P52868 283 aaPredicted RBP8.45□□□□□ -1.06
MET28YIR017C RAI1P53063 387 aaKnown RBP8.45□□□□□ -1.06
MET28YIR017C YIP4P53093 235 aa8.45□□□□□ -1.06
MET28YIR017C YDR391CQ04170 232 aa8.45□□□□□ -1.06
MET28YIR017C ORT1Q12375 292 aa8.45□□□□□ -1.06
MET28YIR017C RPL30P14120 105 aaKnown RBP8.44□□□□□ -1.06
MET28YIR017C CNE1P27825 502 aa8.44□□□□□ -1.06
MET28YIR017C AFG1P32317 509 aa8.44□□□□□ -1.06
MET28YIR017C YBR220CP38318 560 aa8.44□□□□□ -1.06
MET28YIR017C YHK8P38776 514 aa8.44□□□□□ -1.06
MET28YIR017C YFL051CP43552 160 aa8.44□□□□□ -1.06
MET28YIR017C SCW4P53334 386 aaKnown RBP8.44□□□□□ -1.06
MET28YIR017C HHT1P61830 136 aa8.44□□□□□ -1.06
MET28YIR017C LAP3Q01532 483 aaKnown RBP RIP-Chip data8.44□□□□□ -1.06not detected
MET28YIR017C MRL1Q06815 381 aa8.44□□□□□ -1.06
MET28YIR017C YPL199CQ08954 240 aa8.44□□□□□ -1.06
MET28YIR017C SRL2Q12020 392 aa8.44□□□□□ -1.06
MET28YIR017C ATG41Q12048 136 aa8.44□□□□□ -1.06
MET28YIR017C RNH203Q12338 110 aa8.44□□□□□ -1.06
MET28YIR017C IPI1P38803 334 aaPredicted RBP8.43□□□□□ -1.06
MET28YIR017C SMB1P40018 196 aaKnown RBP8.43□□□□□ -1.06
MET28YIR017C IMD3P50095 523 aaKnown RBP8.43□□□□□ -1.06
MET28YIR017C UBC13P52490 153 aa8.43□□□□□ -1.06
MET28YIR017C YGL159WP53110 370 aa8.43□□□□□ -1.06
MET28YIR017C CTF19Q02732 369 aa8.43□□□□□ -1.06
MET28YIR017C MRPL35Q06678 367 aa8.43□□□□□ -1.06
MET28YIR017C YOR283WQ12040 230 aaKnown RBP8.43□□□□□ -1.06
MET28YIR017C SGA1P08019 549 aa8.42□□□□□ -1.06
MET28YIR017C PRE4P30657 266 aa8.42□□□□□ -1.06
MET28YIR017C PPZ2P33329 710 aa8.42□□□□□ -1.06
MET28YIR017C MCH2P36032 473 aa8.42□□□□□ -1.06
MET28YIR017C YGP1P38616 354 aaKnown RBP8.42□□□□□ -1.06
MET28YIR017C ARO9P38840 513 aaPredicted RBP8.42□□□□□ -1.06
MET28YIR017C MIT1P40002 666 aa8.42□□□□□ -1.06
MET28YIR017C SYS1P41544 203 aa8.42□□□□□ -1.06
MET28YIR017C IRC18P47056 224 aa8.42□□□□□ -1.06
MET28YIR017C AVT4P50944 713 aa8.42□□□□□ -1.06
MET28YIR017C YIP5P53108 310 aa8.42□□□□□ -1.06
MET28YIR017C MRH4P53166 561 aa8.42□□□□□ -1.06
MET28YIR017C ERV29P53337 310 aa8.42□□□□□ -1.06
MET28YIR017C RNH201P53942 307 aa8.42□□□□□ -1.06
MET28YIR017C YPL077CQ02831 240 aa8.42□□□□□ -1.06
MET28YIR017C API2Q04413 109 aa8.42□□□□□ -1.06
MET28YIR017C HEM25Q07534 307 aa8.42□□□□□ -1.06
MET28YIR017C RRS1Q08746 203 aaKnown RBP8.42□□□□□ -1.06
MET28YIR017C PHO4P07270 312 aaKnown RBP8.41□□□□□ -1.06
MET28YIR017C MET3P08536 511 aa8.41□□□□□ -1.06
MET28YIR017C ARO3P14843 370 aaKnown RBP8.41□□□□□ -1.06
MET28YIR017C HXT2P23585 541 aa8.41□□□□□ -1.06
MET28YIR017C DEG1P31115 442 aaKnown RBP8.41□□□□□ -1.06
MET28YIR017C ZUO1P32527 433 aaKnown RBP8.41□□□□□ -1.06
MET28YIR017C TCM62P38228 572 aaKnown RBP8.41□□□□□ -1.06
MET28YIR017C MSS4P38994 779 aa8.41□□□□□ -1.06
MET28YIR017C ATF1P40353 525 aa8.41□□□□□ -1.06
MET28YIR017C FLX1P40464 311 aa8.41□□□□□ -1.06
MET28YIR017C YKR005CQ02203 525 aa8.41□□□□□ -1.06
MET28YIR017C YLR283WQ05867 314 aa8.41□□□□□ -1.06
MET28YIR017C YPR196WQ06595 470 aa8.41□□□□□ -1.06
MET28YIR017C RSC58Q07979 502 aa8.41□□□□□ -1.06
MET28YIR017C RFU1Q08003 200 aa8.41□□□□□ -1.06
MET28YIR017C FUR4P05316 633 aaKnown RBP8.4□□□□□ -1.06
MET28YIR017C CDC34P14682 295 aa8.4□□□□□ -1.06
MET28YIR017C DBF20P32328 564 aa8.4□□□□□ -1.06
MET28YIR017C NAB2P32505 525 aaKnown RBP RIP-Chip data8.4□□□□□ -1.06not detected
Retrieved 100 of 5,963 RNA–protein pairs in 80.2 ms