RNA–Protein interactions for RNA: YIL143C

SSL2, Transcript of Component of RNA polymerase transcription factor TFIIH holoenzyme, yeastyeast

Gene SSL2, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL2YIL143C UBP8P50102 471 aa7.87□□□□□ -1.15
SSL2YIL143C YIP4P53093 235 aa7.87□□□□□ -1.15
SSL2YIL143C BER1Q06688 274 aaKnown RBP7.87□□□□□ -1.15
SSL2YIL143C RRT7Q07829 113 aa7.87□□□□□ -1.15
SSL2YIL143C NPC2Q12408 173 aa7.87□□□□□ -1.15
SSL2YIL143C YPR145C-AQ2V2P0 78 aa7.87□□□□□ -1.15
SSL2YIL143C PDX1P16451 410 aa7.86□□□□□ -1.15
SSL2YIL143C SAC7P17121 654 aa7.86□□□□□ -1.15
SSL2YIL143C OAR1P35731 278 aa7.86□□□□□ -1.15
SSL2YIL143C SHM2P37291 469 aaKnown RBP7.86□□□□□ -1.15
SSL2YIL143C CDS1P38221 457 aa7.86□□□□□ -1.15
SSL2YIL143C EMC5P40540 141 aa7.86□□□□□ -1.15
SSL2YIL143C GPI14P47088 403 aaKnown RBP7.86□□□□□ -1.15
SSL2YIL143C HEM25Q07534 307 aa7.86□□□□□ -1.15
SSL2YIL143C SGA1P08019 549 aa7.86□□□□□ -1.15
SSL2YIL143C PPZ2P33329 710 aa7.86□□□□□ -1.15
SSL2YIL143C MRPL27P36526 146 aaPredicted RBP7.86□□□□□ -1.15
SSL2YIL143C GIP2P40036 548 aa7.86□□□□□ -1.15
SSL2YIL143C MNN10P50108 393 aaKnown RBP7.86□□□□□ -1.15
SSL2YIL143C PNC1P53184 216 aaKnown RBP7.86□□□□□ -1.15
SSL2YIL143C PDR16P53860 351 aaKnown RBP7.86□□□□□ -1.15
SSL2YIL143C EST3Q03096 181 aa7.86□□□□□ -1.15
SSL2YIL143C MEX67Q99257 599 aaKnown RBP7.86□□□□□ -1.15
SSL2YIL143C MSK1P32048 576 aa7.85□□□□□ -1.15
SSL2YIL143C MSN4P33749 630 aa7.85□□□□□ -1.15
SSL2YIL143C VBA2P38358 474 aaKnown RBP7.85□□□□□ -1.15
SSL2YIL143C QRI1P43123 477 aaKnown RBP7.85□□□□□ -1.15
SSL2YIL143C NIT3P49954 291 aa7.85□□□□□ -1.15
SSL2YIL143C RDR1Q08904 546 aa7.85□□□□□ -1.15
SSL2YIL143C FCF2Q12035 217 aaPredicted RBP7.85□□□□□ -1.15
SSL2YIL143C CCH1P50077 2039 aa7.85□□□□□ -1.15
SSL2YIL143C YLR358CO13565 187 aa7.85□□□□□ -1.15
SSL2YIL143C GAS1P22146 559 aaKnown RBP7.85□□□□□ -1.15
SSL2YIL143C ADH7P25377 361 aa7.85□□□□□ -1.15
SSL2YIL143C BUB3P26449 341 aa7.85□□□□□ -1.15
SSL2YIL143C ATG8P38182 117 aaRIP-Chip data7.85□□□□□ -1.15not detected
SSL2YIL143C TRR2P38816 342 aa7.85□□□□□ -1.15
SSL2YIL143C YIL077CP40508 320 aa7.85□□□□□ -1.15
SSL2YIL143C MRPL22P53881 309 aa7.85□□□□□ -1.15
SSL2YIL143C APM1Q00776 475 aaPredicted RBP7.85□□□□□ -1.15
SSL2YIL143C URA6P15700 204 aa7.84□□□□□ -1.15
SSL2YIL143C HMX1P32339 317 aa7.84□□□□□ -1.15
SSL2YIL143C SPT10P35208 640 aa7.84□□□□□ -1.15
SSL2YIL143C RRP3P38712 501 aaKnown RBP7.84□□□□□ -1.15
SSL2YIL143C POG1P40473 351 aa7.84□□□□□ -1.15
SSL2YIL143C AVT7P40501 490 aa7.84□□□□□ -1.15
SSL2YIL143C BXI1P48558 297 aa7.84□□□□□ -1.15
SSL2YIL143C RVB1Q03940 463 aaKnown RBP7.84□□□□□ -1.15
SSL2YIL143C LUC7Q07508 261 aaPredicted RBP7.84□□□□□ -1.15
SSL2YIL143C RPS13P05756 151 aaKnown RBP7.84□□□□□ -1.15
SSL2YIL143C CHO1P08456 276 aa7.84□□□□□ -1.15
SSL2YIL143C MRPL37P36532 105 aa7.84□□□□□ -1.15
SSL2YIL143C POP8P38208 133 aa7.84□□□□□ -1.15
SSL2YIL143C YJL016WP47072 561 aa7.84□□□□□ -1.15
SSL2YIL143C CCC1P47818 322 aa7.84□□□□□ -1.15
SSL2YIL143C MOT3P54785 490 aaKnown RBP7.84□□□□□ -1.15
SSL2YIL143C YHM2Q04013 314 aa7.84□□□□□ -1.15
SSL2YIL143C YKL071WP36086 256 aa7.83□□□□□ -1.16
SSL2YIL143C IMD2P38697 523 aaKnown RBP7.83□□□□□ -1.16
SSL2YIL143C RRD1P40454 393 aaKnown RBP7.83□□□□□ -1.16
SSL2YIL143C ACS2P52910 683 aaKnown RBP7.83□□□□□ -1.16
SSL2YIL143C FYV6P53913 173 aa7.83□□□□□ -1.16
SSL2YIL143C ACT1P60010 375 aaKnown RBP7.83□□□□□ -1.16
SSL2YIL143C SDO1Q07953 250 aaKnown RBP7.83□□□□□ -1.16
SSL2YIL143C YLR146W-AQ2V2P1 62 aa7.83□□□□□ -1.16
SSL2YIL143C NAG1Q8TGN9 163 aa7.83□□□□□ -1.16
SSL2YIL143C MDM35O60200 86 aa7.83□□□□□ -1.16
SSL2YIL143C PET18P25362 215 aa7.83□□□□□ -1.16
SSL2YIL143C FMT1P32785 401 aa7.83□□□□□ -1.16
SSL2YIL143C VPS51P36116 164 aa7.83□□□□□ -1.16
SSL2YIL143C NTC20P38302 140 aaPredicted RBP7.83□□□□□ -1.16
SSL2YIL143C DUG1P43616 481 aaKnown RBP7.83□□□□□ -1.16
SSL2YIL143C YNR061CP53747 219 aa7.83□□□□□ -1.16
SSL2YIL143C MRX8Q05473 314 aa7.83□□□□□ -1.16
SSL2YIL143C PAR32Q12515 295 aaKnown RBP7.83□□□□□ -1.16
SSL2YIL143C LNP1P38878 278 aa7.82□□□□□ -1.16
SSL2YIL143C NIT2P47016 307 aa7.82□□□□□ -1.16
SSL2YIL143C NIF3P53081 288 aa7.82□□□□□ -1.16
SSL2YIL143C YDR444WQ04093 687 aa7.82□□□□□ -1.16
SSL2YIL143C HDA2Q06629 674 aa7.82□□□□□ -1.16
SSL2YIL143C PET20Q99373 253 aa7.82□□□□□ -1.16
SSL2YIL143C YML003WP0CF16 290 aa7.82□□□□□ -1.16
SSL2YIL143C RPL20AP0CX23 172 aaKnown RBP7.82□□□□□ -1.16
SSL2YIL143C RPL20BP0CX24 172 aaPredicted RBP7.82□□□□□ -1.16
SSL2YIL143C RPB3P16370 318 aaKnown RBP7.82□□□□□ -1.16
SSL2YIL143C SCL1P21243 252 aaKnown RBP7.82□□□□□ -1.16
SSL2YIL143C DAL3P32459 195 aa7.82□□□□□ -1.16
SSL2YIL143C NRP1P32770 719 aaKnown RBP RIP-Chip data7.82□□□□□ -1.16not detected
SSL2YIL143C COS9P36034 407 aa7.82□□□□□ -1.16
SSL2YIL143C FMP46P36141 133 aaKnown RBP7.82□□□□□ -1.16
SSL2YIL143C VMA21P41806 77 aa7.82□□□□□ -1.16
SSL2YIL143C YGR012WP53206 393 aa7.82□□□□□ -1.16
SSL2YIL143C SKO1Q02100 647 aa7.82□□□□□ -1.16
SSL2YIL143C ARL3Q02804 198 aa7.82□□□□□ -1.16
SSL2YIL143C MDM30Q05930 598 aa7.82□□□□□ -1.16
SSL2YIL143C STE18P18852 110 aa7.81□□□□□ -1.16
SSL2YIL143C PRO1P32264 428 aa7.81□□□□□ -1.16
SSL2YIL143C MNL1P38888 796 aa7.81□□□□□ -1.16
SSL2YIL143C SOL1P50278 321 aa7.81□□□□□ -1.16
SSL2YIL143C NRG1Q03125 231 aa7.81□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 138.7 ms