RNA–Protein interactions for RNA: YHR111W

UBA4, Transcript of E1-like protein that activates Urm1p before urmylation, yeastyeast

Gene UBA4, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBA4YHR111W YDC1Q02896 317 aa8.69□□□□□ -1.02
UBA4YHR111W FRE3Q08905 711 aa8.69□□□□□ -1.02
UBA4YHR111W TGS1Q12052 315 aa8.69□□□□□ -1.02
UBA4YHR111W USB1Q12208 290 aaKnown RBP8.69□□□□□ -1.02
UBA4YHR111W RTR2Q12378 196 aa8.69□□□□□ -1.02
UBA4YHR111W YPR1Q12458 312 aa8.69□□□□□ -1.02
UBA4YHR111W YML003WP0CF16 290 aa8.68□□□□□ -1.02
UBA4YHR111W VPS17P32913 551 aa8.68□□□□□ -1.02
UBA4YHR111W SLI1P53304 468 aa8.68□□□□□ -1.02
UBA4YHR111W DLT1Q04216 342 aa8.68□□□□□ -1.02
UBA4YHR111W GMC1Q04399 608 aa8.68□□□□□ -1.02
UBA4YHR111W YMR252CQ04814 134 aa8.68□□□□□ -1.02
UBA4YHR111W LUC7Q07508 261 aaPredicted RBP8.68□□□□□ -1.02
UBA4YHR111W SNA4Q07549 140 aa8.68□□□□□ -1.02
UBA4YHR111W RPL30P14120 105 aaKnown RBP8.67□□□□□ -1.02
UBA4YHR111W RPS5P26783 225 aaKnown RBP8.67□□□□□ -1.02
UBA4YHR111W PAU24P38155 120 aa8.67□□□□□ -1.02
UBA4YHR111W ARC40P38328 384 aaKnown RBP8.67□□□□□ -1.02
UBA4YHR111W NVJ1P38881 321 aa8.67□□□□□ -1.02
UBA4YHR111W PAM16P42949 149 aa8.67□□□□□ -1.02
UBA4YHR111W HLR1Q04429 423 aa8.67□□□□□ -1.02
UBA4YHR111W YBL113CQ7M4S9 792 aa8.67□□□□□ -1.02
UBA4YHR111W REP1P03871 373 aa8.66□□□□□ -1.02
UBA4YHR111W COX9P07255 59 aa8.66□□□□□ -1.02
UBA4YHR111W MRP1P10662 321 aaKnown RBP8.66□□□□□ -1.02
UBA4YHR111W REC114P32841 428 aa8.66□□□□□ -1.02
UBA4YHR111W MED8P38304 223 aa8.66□□□□□ -1.02
UBA4YHR111W SDS24P38314 527 aa8.66□□□□□ -1.02
UBA4YHR111W CIN2P46670 268 aa8.66□□□□□ -1.02
UBA4YHR111W MRX10Q05648 414 aa8.66□□□□□ -1.02
UBA4YHR111W YPR098CQ06089 161 aa8.66□□□□□ -1.02
UBA4YHR111W NEJ1Q06148 342 aa8.66□□□□□ -1.02
UBA4YHR111W SSK1Q07084 712 aa8.66□□□□□ -1.02
UBA4YHR111W RBD2Q12270 262 aa8.66□□□□□ -1.02
UBA4YHR111W TY1A-NL1Q12391 440 aaKnown RBP8.66□□□□□ -1.02
UBA4YHR111W RPL39P04650 51 aa8.65□□□□□ -1.02
UBA4YHR111W TCM62P38228 572 aaKnown RBP8.65□□□□□ -1.02
UBA4YHR111W GOS1P38736 223 aa8.65□□□□□ -1.02
UBA4YHR111W LYS20P48570 428 aaKnown RBP8.65□□□□□ -1.02
UBA4YHR111W PHB2P50085 310 aa8.65□□□□□ -1.02
UBA4YHR111W YGL204CP53089 101 aa8.65□□□□□ -1.02
UBA4YHR111W YGL159WP53110 370 aa8.65□□□□□ -1.02
UBA4YHR111W RFU1Q08003 200 aa8.65□□□□□ -1.02
UBA4YHR111W LYS21Q12122 440 aaKnown RBP8.65□□□□□ -1.02
UBA4YHR111W YLR108CQ12259 485 aa8.65□□□□□ -1.02
UBA4YHR111W RDL1Q12305 139 aaKnown RBP8.65□□□□□ -1.02
UBA4YHR111W PRE7P23724 241 aaKnown RBP8.64□□□□□ -1.03
UBA4YHR111W AFG1P32317 509 aa8.64□□□□□ -1.03
UBA4YHR111W VMA6P32366 345 aaKnown RBP8.64□□□□□ -1.03
UBA4YHR111W DOA4P32571 926 aa8.64□□□□□ -1.03
UBA4YHR111W SSH1P38353 490 aaKnown RBP8.64□□□□□ -1.03
UBA4YHR111W ERJ5P43613 295 aaPredicted RBP8.64□□□□□ -1.03
UBA4YHR111W MAK3Q03503 176 aa8.64□□□□□ -1.03
UBA4YHR111W FRE8Q12209 686 aa8.64□□□□□ -1.03
UBA4YHR111W SAG1P20840 650 aa8.63□□□□□ -1.03
UBA4YHR111W AHC2P25649 128 aa8.63□□□□□ -1.03
UBA4YHR111W MKS1P34072 584 aa8.63□□□□□ -1.03
UBA4YHR111W MTH1P35198 433 aa8.63□□□□□ -1.03
UBA4YHR111W BNA2P47125 453 aa8.63□□□□□ -1.03
UBA4YHR111W YIP4P53093 235 aa8.63□□□□□ -1.03
UBA4YHR111W NMA1Q06178 401 aaKnown RBP8.63□□□□□ -1.03
UBA4YHR111W YCL048W-AQ2V2Q2 79 aa8.63□□□□□ -1.03
UBA4YHR111W SGA1P08019 549 aa8.62□□□□□ -1.03
UBA4YHR111W PPZ2P33329 710 aa8.62□□□□□ -1.03
UBA4YHR111W SOL3P38858 249 aa8.62□□□□□ -1.03
UBA4YHR111W CTR2P38865 189 aa8.62□□□□□ -1.03
UBA4YHR111W SGN1P40561 250 aaKnown RBP RIP-Chip data8.62□□□□□ -1.03not detected
UBA4YHR111W ABM1P47146 123 aa8.62□□□□□ -1.03
UBA4YHR111W YJR120WP47157 116 aa8.62□□□□□ -1.03
UBA4YHR111W AVT4P50944 713 aa8.62□□□□□ -1.03
UBA4YHR111W YKR005CQ02203 525 aa8.62□□□□□ -1.03
UBA4YHR111W PRP3Q03338 469 aaPredicted RBP8.62□□□□□ -1.03
UBA4YHR111W PEX30Q06169 523 aa8.62□□□□□ -1.03
UBA4YHR111W TPO3Q06451 622 aa8.62□□□□□ -1.03
UBA4YHR111W RRP15Q06511 250 aaPredicted RBP8.62□□□□□ -1.03
UBA4YHR111W ERP4Q12450 207 aa8.62□□□□□ -1.03
UBA4YHR111W YOX1P34161 385 aa8.61□□□□□ -1.03
UBA4YHR111W ZRT3P34240 503 aa8.61□□□□□ -1.03
UBA4YHR111W RCN1P36054 211 aa8.61□□□□□ -1.03
UBA4YHR111W MSS4P38994 779 aa8.61□□□□□ -1.03
UBA4YHR111W MID1P41821 548 aa8.61□□□□□ -1.03
UBA4YHR111W EFM3P47163 339 aa8.61□□□□□ -1.03
UBA4YHR111W PMT5P52867 743 aa8.61□□□□□ -1.03
UBA4YHR111W POP6P53218 158 aa8.61□□□□□ -1.03
UBA4YHR111W RNH201P53942 307 aa8.61□□□□□ -1.03
UBA4YHR111W YDR248CQ03786 193 aa8.61□□□□□ -1.03
UBA4YHR111W ASR1Q06834 288 aa8.61□□□□□ -1.03
UBA4YHR111W CSI2Q08054 341 aa8.61□□□□□ -1.03
UBA4YHR111W YLR099W-AQ3E798 87 aa8.61□□□□□ -1.03
UBA4YHR111W YEL009C-AA0A023PZF2 135 aa8.6□□□□□ -1.03
UBA4YHR111W ADK1P07170 222 aaKnown RBP8.6□□□□□ -1.03
UBA4YHR111W MATALPHA1P0CY06 175 aa8.6□□□□□ -1.03
UBA4YHR111W HMLALPHA1P0CY07 175 aa8.6□□□□□ -1.03
UBA4YHR111W APA2P22108 325 aa8.6□□□□□ -1.03
UBA4YHR111W PAU2P32612 120 aa8.6□□□□□ -1.03
UBA4YHR111W YND1P40009 630 aa8.6□□□□□ -1.03
UBA4YHR111W DDI1P40087 428 aa8.6□□□□□ -1.03
UBA4YHR111W RIO2P40160 425 aaKnown RBP8.6□□□□□ -1.03
UBA4YHR111W YHC3P47040 408 aa8.6□□□□□ -1.03
UBA4YHR111W YAE1P47118 141 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms