RNA–Protein interactions for RNA: YGR161C-D

YGR161C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YGR161C-D, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR161C-DYGR161C-D SWD3P38123 315 aa2.39□□□□□ -2.03
YGR161C-DYGR161C-D YBL029WP38201 376 aa2.39□□□□□ -2.03
YGR161C-DYGR161C-D SVP26P38869 228 aa2.39□□□□□ -2.03
YGR161C-DYGR161C-D GPP2P40106 250 aaKnown RBP2.39□□□□□ -2.03
YGR161C-DYGR161C-D YGR149WP48236 432 aa2.39□□□□□ -2.03
YGR161C-DYGR161C-D BUL1P48524 976 aa2.39□□□□□ -2.03
YGR161C-DYGR161C-D NUP57P48837 541 aa2.39□□□□□ -2.03
YGR161C-DYGR161C-D TOS8P53147 276 aa2.39□□□□□ -2.03
YGR161C-DYGR161C-D YLR152CP54072 576 aa2.39□□□□□ -2.03
YGR161C-DYGR161C-D PIR3Q03180 325 aa2.39□□□□□ -2.03
YGR161C-DYGR161C-D YML079WQ03629 201 aa2.39□□□□□ -2.03
YGR161C-DYGR161C-D ERF2Q06551 359 aa2.39□□□□□ -2.03
YGR161C-DYGR161C-D SNX3Q08826 162 aaKnown RBP2.39□□□□□ -2.03
YGR161C-DYGR161C-D ACM1Q08981 209 aa2.39□□□□□ -2.03
YGR161C-DYGR161C-D DCS2Q12123 353 aa2.39□□□□□ -2.03
YGR161C-DYGR161C-D TFC7Q12415 435 aa2.39□□□□□ -2.03
YGR161C-DYGR161C-D RDI1Q12434 202 aa2.39□□□□□ -2.03
YGR161C-DYGR161C-D ERD2P18414 219 aa2.38□□□□□ -2.03
YGR161C-DYGR161C-D FTH1P38310 465 aa2.38□□□□□ -2.03
YGR161C-DYGR161C-D SSH1P38353 490 aaKnown RBP2.38□□□□□ -2.03
YGR161C-DYGR161C-D PSD1P39006 500 aa2.38□□□□□ -2.03
YGR161C-DYGR161C-D SIT1P39980 628 aa2.38□□□□□ -2.03
YGR161C-DYGR161C-D VHR1P40522 640 aa2.38□□□□□ -2.03
YGR161C-DYGR161C-D HIS6P40545 261 aa2.38□□□□□ -2.03
YGR161C-DYGR161C-D STE24P47154 453 aa2.38□□□□□ -2.03
YGR161C-DYGR161C-D DIA1P54005 336 aa2.38□□□□□ -2.03
YGR161C-DYGR161C-D COA4Q05809 96 aa2.38□□□□□ -2.03
YGR161C-DYGR161C-D CTS2Q06350 511 aa2.38□□□□□ -2.03
YGR161C-DYGR161C-D MRX9Q07349 420 aaKnown RBP2.38□□□□□ -2.03
YGR161C-DYGR161C-D FRE8Q12209 686 aa2.38□□□□□ -2.03
YGR161C-DYGR161C-D RNH203Q12338 110 aa2.38□□□□□ -2.03
YGR161C-DYGR161C-D COX1P00401 534 aa2.38□□□□□ -2.03
YGR161C-DYGR161C-D RPL9AP05738 191 aaKnown RBP2.38□□□□□ -2.03
YGR161C-DYGR161C-D CNE1P27825 502 aa2.38□□□□□ -2.03
YGR161C-DYGR161C-D UGX2P32772 223 aa2.38□□□□□ -2.03
YGR161C-DYGR161C-D MGM101P32787 269 aaKnown RBP2.38□□□□□ -2.03
YGR161C-DYGR161C-D TIF3P34167 436 aaKnown RBP2.38□□□□□ -2.03
YGR161C-DYGR161C-D SET3P36124 751 aa2.38□□□□□ -2.03
YGR161C-DYGR161C-D SIM1P40472 476 aa2.38□□□□□ -2.03
YGR161C-DYGR161C-D XPT1P47165 209 aa2.38□□□□□ -2.03
YGR161C-DYGR161C-D HST3P53687 447 aa2.38□□□□□ -2.03
YGR161C-DYGR161C-D RHO5P53879 331 aaKnown RBP2.38□□□□□ -2.03
YGR161C-DYGR161C-D CWC27Q02770 301 aa2.38□□□□□ -2.03
YGR161C-DYGR161C-D RSM28Q03430 361 aa2.38□□□□□ -2.03
YGR161C-DYGR161C-D PPT2Q12036 173 aa2.38□□□□□ -2.03
YGR161C-DYGR161C-D SAC1P32368 623 aaKnown RBP2.38□□□□□ -2.03
YGR161C-DYGR161C-D YKL063CP35725 167 aa2.38□□□□□ -2.03
YGR161C-DYGR161C-D PUG1P40100 303 aa2.38□□□□□ -2.03
YGR161C-DYGR161C-D AGX1P43567 385 aa2.38□□□□□ -2.03
YGR161C-DYGR161C-D HAM1P47119 197 aaKnown RBP2.38□□□□□ -2.03
YGR161C-DYGR161C-D YPL077CQ02831 240 aa2.38□□□□□ -2.03
YGR161C-DYGR161C-D TVP15Q03860 143 aa2.38□□□□□ -2.03
YGR161C-DYGR161C-D PKR1Q03880 122 aaKnown RBP2.38□□□□□ -2.03
YGR161C-DYGR161C-D ATC1Q04005 294 aa2.38□□□□□ -2.03
YGR161C-DYGR161C-D THI72Q08579 599 aa2.38□□□□□ -2.03
YGR161C-DYGR161C-D ALG6Q12001 544 aaKnown RBP2.38□□□□□ -2.03
YGR161C-DYGR161C-D TIR4Q12218 487 aaPredicted RBP2.38□□□□□ -2.03
YGR161C-DYGR161C-D SNF8Q12483 233 aa2.38□□□□□ -2.03
YGR161C-DYGR161C-D RRP7P25368 297 aaPredicted RBP2.38□□□□□ -2.03
YGR161C-DYGR161C-D EHD3P28817 500 aa2.38□□□□□ -2.03
YGR161C-DYGR161C-D PTR2P32901 601 aa2.38□□□□□ -2.03
YGR161C-DYGR161C-D DAD2P36162 133 aa2.38□□□□□ -2.03
YGR161C-DYGR161C-D HEK2P38199 381 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
YGR161C-DYGR161C-D RRP4P38792 359 aaKnown RBP2.38□□□□□ -2.03
YGR161C-DYGR161C-D SMB1P40018 196 aaKnown RBP2.38□□□□□ -2.03
YGR161C-DYGR161C-D SDS23P53172 527 aa2.38□□□□□ -2.03
YGR161C-DYGR161C-D PMP3P87284 55 aa2.38□□□□□ -2.03
YGR161C-DYGR161C-D DST1P07273 309 aa2.37□□□□□ -2.03
YGR161C-DYGR161C-D IMA3P0CW40 589 aa2.37□□□□□ -2.03
YGR161C-DYGR161C-D IMA4P0CW41 589 aa2.37□□□□□ -2.03
YGR161C-DYGR161C-D FUS3P16892 353 aaKnown RBP2.37□□□□□ -2.03
YGR161C-DYGR161C-D SPO11P23179 398 aa2.37□□□□□ -2.03
YGR161C-DYGR161C-D SCO1P23833 295 aa2.37□□□□□ -2.03
YGR161C-DYGR161C-D RNP1P32385 249 aa2.37□□□□□ -2.03
YGR161C-DYGR161C-D MRPS5P33759 307 aa2.37□□□□□ -2.03
YGR161C-DYGR161C-D SHE1P38200 338 aa2.37□□□□□ -2.03
YGR161C-DYGR161C-D OM14P38325 134 aa2.37□□□□□ -2.03
YGR161C-DYGR161C-D SET5P38890 526 aaKnown RBP2.37□□□□□ -2.03
YGR161C-DYGR161C-D SEC72P39742 193 aaKnown RBP2.37□□□□□ -2.03
YGR161C-DYGR161C-D NSA2P40078 261 aaKnown RBP2.37□□□□□ -2.03
YGR161C-DYGR161C-D AMA1P50082 593 aa2.37□□□□□ -2.03
YGR161C-DYGR161C-D MGA1P53050 456 aa2.37□□□□□ -2.03
YGR161C-DYGR161C-D VPS28Q02767 242 aa2.37□□□□□ -2.03
YGR161C-DYGR161C-D ROT1Q03691 256 aa2.37□□□□□ -2.03
YGR161C-DYGR161C-D YMR155WQ03795 547 aa2.37□□□□□ -2.03
YGR161C-DYGR161C-D VBA1Q04301 562 aa2.37□□□□□ -2.03
YGR161C-DYGR161C-D DTD1Q07648 150 aaKnown RBP2.37□□□□□ -2.03
YGR161C-DYGR161C-D IZH3Q07959 543 aa2.37□□□□□ -2.03
YGR161C-DYGR161C-D IMA2Q08295 589 aa2.37□□□□□ -2.03
YGR161C-DYGR161C-D CSM4Q08955 156 aa2.37□□□□□ -2.03
YGR161C-DYGR161C-D PAA1Q12447 191 aaKnown RBP2.37□□□□□ -2.03
YGR161C-DYGR161C-D RAX2Q12465 1220 aa2.37□□□□□ -2.03
YGR161C-DYGR161C-D SUS1Q6WNK7 96 aa2.37□□□□□ -2.03
YGR161C-DYGR161C-D MIR1P23641 311 aaKnown RBP2.37□□□□□ -2.03
YGR161C-DYGR161C-D PHD1P36093 366 aa2.37□□□□□ -2.03
YGR161C-DYGR161C-D TRM5P38793 499 aa2.37□□□□□ -2.03
YGR161C-DYGR161C-D HXT14P42833 540 aa2.37□□□□□ -2.03
YGR161C-DYGR161C-D SUT1P53032 299 aaKnown RBP2.37□□□□□ -2.03
YGR161C-DYGR161C-D ARO8P53090 500 aaKnown RBP2.37□□□□□ -2.03
YGR161C-DYGR161C-D NCE103P53615 221 aa2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 37.4 ms