RNA–Protein interactions for RNA: YGR136W

LSB1, Transcript of Negative regulator of actin nucleation-promoting factor activity, yeastyeast

Gene LSB1, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSB1YGR136W VRG4P40107 337 aa3.79□□□□□ -1.8
LSB1YGR136W UTP25P40498 721 aaKnown RBP3.79□□□□□ -1.8
LSB1YGR136W YFL015CP43578 164 aa3.79□□□□□ -1.8
LSB1YGR136W BNA6P43619 295 aa3.79□□□□□ -1.8
LSB1YGR136W HMS2P47175 358 aa3.79□□□□□ -1.8
LSB1YGR136W TRM9P49957 279 aa3.79□□□□□ -1.8
LSB1YGR136W NUP49Q02199 472 aa3.79□□□□□ -1.8
LSB1YGR136W PRM15Q03262 622 aa3.79□□□□□ -1.8
LSB1YGR136W AIM36Q03798 255 aa3.79□□□□□ -1.8
LSB1YGR136W RSF1Q05043 376 aa3.79□□□□□ -1.8
LSB1YGR136W PHO92Q06390 306 aa3.79□□□□□ -1.8
LSB1YGR136W ASR1Q06834 288 aa3.79□□□□□ -1.8
LSB1YGR136W LUC7Q07508 261 aaPredicted RBP3.79□□□□□ -1.8
LSB1YGR136W ZEO1Q08245 113 aa3.79□□□□□ -1.8
LSB1YGR136W DCI1Q08558 271 aa3.79□□□□□ -1.8
LSB1YGR136W PEX27Q08580 376 aa3.79□□□□□ -1.8
LSB1YGR136W FDH1Q08911 376 aa3.79□□□□□ -1.8
LSB1YGR136W YPL272CQ08984 517 aa3.79□□□□□ -1.8
LSB1YGR136W YOL163WP0CF20 169 aa3.78□□□□□ -1.8
LSB1YGR136W CUP1-1P0CX80 61 aa3.78□□□□□ -1.8
LSB1YGR136W CUP1-2P0CX81 61 aa3.78□□□□□ -1.8
LSB1YGR136W CDC23P16522 626 aa3.78□□□□□ -1.8
LSB1YGR136W MDH1P17505 334 aaKnown RBP RIP-Chip data3.78□□□□□ -1.8not detected
LSB1YGR136W YCR006CP25350 157 aa3.78□□□□□ -1.8
LSB1YGR136W TAH1P25638 111 aaPredicted RBP3.78□□□□□ -1.8
LSB1YGR136W VMA5P31412 392 aaKnown RBP3.78□□□□□ -1.8
LSB1YGR136W ARO7P32178 256 aa3.78□□□□□ -1.8
LSB1YGR136W GSH1P32477 678 aa3.78□□□□□ -1.8
LSB1YGR136W DOA4P32571 926 aa3.78□□□□□ -1.8
LSB1YGR136W ORC2P32833 620 aa3.78□□□□□ -1.8
LSB1YGR136W SPT10P35208 640 aa3.78□□□□□ -1.8
LSB1YGR136W TUL1P36096 758 aa3.78□□□□□ -1.8
LSB1YGR136W MBA1P38300 278 aa3.78□□□□□ -1.8
LSB1YGR136W ERV15P38312 142 aa3.78□□□□□ -1.8
LSB1YGR136W PRP39P39682 629 aaKnown RBP3.78□□□□□ -1.8
LSB1YGR136W BUR6P40096 142 aa3.78□□□□□ -1.8
LSB1YGR136W CIN1P40987 1014 aa3.78□□□□□ -1.8
LSB1YGR136W SPG5P42933 373 aa3.78□□□□□ -1.8
LSB1YGR136W DPB11P47027 764 aaPredicted RBP3.78□□□□□ -1.8
LSB1YGR136W NUP57P48837 541 aa3.78□□□□□ -1.8
LSB1YGR136W MNT4P53745 580 aa3.78□□□□□ -1.8
LSB1YGR136W YCL001W-AP87012 153 aa3.78□□□□□ -1.8
LSB1YGR136W TPS1Q00764 495 aaKnown RBP3.78□□□□□ -1.8
LSB1YGR136W MAK3Q03503 176 aa3.78□□□□□ -1.8
LSB1YGR136W RNH202Q05635 350 aa3.78□□□□□ -1.8
LSB1YGR136W NDE2Q07500 545 aa3.78□□□□□ -1.8
LSB1YGR136W YPL199CQ08954 240 aa3.78□□□□□ -1.8
LSB1YGR136W YOR283WQ12040 230 aaKnown RBP3.78□□□□□ -1.8
LSB1YGR136W AEP3Q12089 606 aa3.78□□□□□ -1.8
LSB1YGR136W BSC1Q12140 328 aa3.78□□□□□ -1.8
LSB1YGR136W SIA1Q12212 622 aa3.78□□□□□ -1.8
LSB1YGR136W RTN2Q12443 393 aa3.78□□□□□ -1.8
LSB1YGR136W SKS1Q12505 502 aa3.78□□□□□ -1.8
LSB1YGR136W RPC40P07703 335 aaKnown RBP3.77□□□□□ -1.81
LSB1YGR136W YFR010W-AP0C5N0 62 aa3.77□□□□□ -1.81
LSB1YGR136W FUS3P16892 353 aaKnown RBP3.77□□□□□ -1.81
LSB1YGR136W GLK1P17709 500 aaKnown RBP3.77□□□□□ -1.81
LSB1YGR136W NAM9P27929 486 aa3.77□□□□□ -1.81
LSB1YGR136W OAC1P32332 324 aa3.77□□□□□ -1.81
LSB1YGR136W RNP1P32385 249 aa3.77□□□□□ -1.81
LSB1YGR136W SRB6P32570 121 aa3.77□□□□□ -1.81
LSB1YGR136W MSN2P33748 704 aa3.77□□□□□ -1.81
LSB1YGR136W YOR062CP36025 268 aa3.77□□□□□ -1.81
LSB1YGR136W MRPL15P36523 253 aa3.77□□□□□ -1.81
LSB1YGR136W NSG1P38837 291 aa3.77□□□□□ -1.81
LSB1YGR136W MDM31P38880 579 aa3.77□□□□□ -1.81
LSB1YGR136W YIL166CP40445 542 aa3.77□□□□□ -1.81
LSB1YGR136W YIR035CP40579 254 aa3.77□□□□□ -1.81
LSB1YGR136W RPL10P41805 221 aaKnown RBP3.77□□□□□ -1.81
LSB1YGR136W GNA1P43577 159 aaPredicted RBP3.77□□□□□ -1.81
LSB1YGR136W IRC7P43623 340 aa3.77□□□□□ -1.81
LSB1YGR136W JHD2P47156 728 aaPredicted RBP3.77□□□□□ -1.81
LSB1YGR136W DOC1P53068 250 aa3.77□□□□□ -1.81
LSB1YGR136W MPC1P53157 130 aaKnown RBP3.77□□□□□ -1.81
LSB1YGR136W ERV14P53173 138 aa3.77□□□□□ -1.81
LSB1YGR136W JAC1P53193 184 aa3.77□□□□□ -1.81
LSB1YGR136W NUP116Q02630 1113 aa3.77□□□□□ -1.81
LSB1YGR136W GRX5Q02784 150 aa3.77□□□□□ -1.81
LSB1YGR136W KAP120Q02932 1032 aa3.77□□□□□ -1.81
LSB1YGR136W PEX25Q02969 394 aa3.77□□□□□ -1.81
LSB1YGR136W YMR087WQ04299 284 aa3.77□□□□□ -1.81
LSB1YGR136W FRE3Q08905 711 aa3.77□□□□□ -1.81
LSB1YGR136W MMT2Q08970 484 aa3.77□□□□□ -1.81
LSB1YGR136W TPO4Q12256 659 aa3.77□□□□□ -1.81
LSB1YGR136W ISN1Q99312 450 aa3.77□□□□□ -1.81
LSB1YGR136W RAD52P06778 471 aaKnown RBP3.76□□□□□ -1.81
LSB1YGR136W CAR2P07991 424 aaKnown RBP3.76□□□□□ -1.81
LSB1YGR136W RIP1P08067 215 aa3.76□□□□□ -1.81
LSB1YGR136W SNF6P18888 332 aa3.76□□□□□ -1.81
LSB1YGR136W PHO80P20052 293 aa3.76□□□□□ -1.81
LSB1YGR136W PRP2P20095 876 aaPredicted RBP3.76□□□□□ -1.81
LSB1YGR136W MCK1P21965 375 aaKnown RBP3.76□□□□□ -1.81
LSB1YGR136W YCR101CP25607 182 aa3.76□□□□□ -1.81
LSB1YGR136W YMC1P32331 307 aa3.76□□□□□ -1.81
LSB1YGR136W SCM4P32564 187 aa3.76□□□□□ -1.81
LSB1YGR136W PDC2P32896 925 aa3.76□□□□□ -1.81
LSB1YGR136W SNU114P36048 1008 aaKnown RBP3.76□□□□□ -1.81
LSB1YGR136W SRP102P36057 244 aaPredicted RBP3.76□□□□□ -1.81
LSB1YGR136W YMR262WP38430 313 aa3.76□□□□□ -1.81
LSB1YGR136W LAG1P38703 411 aa3.76□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms