RNA–Protein interactions for RNA: YGL028C

SCW11, Transcript of Cell wall protein with similarity to glucanases, yeast

Gene SCW11, Length 1,629 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCW11	YGL028C	RPE1	P46969	238 aa		0.94	□□□□□ -2.26
SCW11	YGL028C	EMC2	P47133	292 aa	Known RBP	0.94	□□□□□ -2.26
SCW11	YGL028C	TIM21	P53220	239 aa		0.94	□□□□□ -2.26
SCW11	YGL028C	SYF2	P53277	215 aa	Predicted RBP	0.94	□□□□□ -2.26
SCW11	YGL028C	CAB4	P53332	305 aa		0.94	□□□□□ -2.26
SCW11	YGL028C	AAH1	P53909	347 aa		0.94	□□□□□ -2.26
SCW11	YGL028C	KAP95	Q06142	861 aa	Known RBP	0.94	□□□□□ -2.26
SCW11	YGL028C	YOL019W	Q08157	551 aa		0.94	□□□□□ -2.26
SCW11	YGL028C	YPL247C	Q12523	523 aa		0.94	□□□□□ -2.26
SCW11	YGL028C	BEM2	P39960	2167 aa	Known RBP	0.94	□□□□□ -2.26
SCW11	YGL028C	RPL26A	P05743	127 aa	Known RBP	0.93	□□□□□ -2.26
SCW11	YGL028C	MSF1	P08425	469 aa		0.93	□□□□□ -2.26
SCW11	YGL028C	RRT12	P25381	491 aa		0.93	□□□□□ -2.26
SCW11	YGL028C	COY1	P34237	679 aa		0.93	□□□□□ -2.26
SCW11	YGL028C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	0.93	□□□□□ -2.26	not detected
SCW11	YGL028C	DRE2	P36152	348 aa		0.93	□□□□□ -2.26
SCW11	YGL028C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	0.93	□□□□□ -2.26	RIP-Chip
SCW11	YGL028C	TEM1	P38987	245 aa		0.93	□□□□□ -2.26
SCW11	YGL028C	YJL028W	P47062	111 aa		0.93	□□□□□ -2.26
SCW11	YGL028C	RPL26B	P53221	127 aa	Known RBP	0.93	□□□□□ -2.26
SCW11	YGL028C	SSU72	P53538	206 aa	Predicted RBP	0.93	□□□□□ -2.26
SCW11	YGL028C	MIX17	Q03667	156 aa		0.93	□□□□□ -2.26
SCW11	YGL028C	OST6	Q03723	332 aa		0.93	□□□□□ -2.26
SCW11	YGL028C	EMI1	Q04406	187 aa		0.93	□□□□□ -2.26
SCW11	YGL028C	CTR3	Q06686	241 aa		0.93	□□□□□ -2.26
SCW11	YGL028C	VPS68	Q12016	184 aa		0.93	□□□□□ -2.26
SCW11	YGL028C	SNF8	Q12483	233 aa		0.93	□□□□□ -2.26
SCW11	YGL028C	YEL009C-A	A0A023PZF2	135 aa		0.93	□□□□□ -2.26
SCW11	YGL028C	HIS1	P00498	297 aa	Known RBP	0.93	□□□□□ -2.26
SCW11	YGL028C	QRI5	P32344	111 aa		0.93	□□□□□ -2.26
SCW11	YGL028C	SFC1	P33303	322 aa		0.93	□□□□□ -2.26
SCW11	YGL028C	MRX3	P38172	270 aa		0.93	□□□□□ -2.26
SCW11	YGL028C	PRS2	P38620	318 aa	Known RBP	0.93	□□□□□ -2.26
SCW11	YGL028C	MED6	P38782	295 aa		0.93	□□□□□ -2.26
SCW11	YGL028C	SMB1	P40018	196 aa	Known RBP	0.93	□□□□□ -2.26
SCW11	YGL028C	COG3	P40094	801 aa		0.93	□□□□□ -2.26
SCW11	YGL028C	YJL118W	P47022	219 aa		0.93	□□□□□ -2.26
SCW11	YGL028C	YJR141W	P47172	347 aa	Predicted RBP	0.93	□□□□□ -2.26
SCW11	YGL028C	YJR146W	P47174	117 aa		0.93	□□□□□ -2.26
SCW11	YGL028C	NBP1	P52919	319 aa	Predicted RBP	0.93	□□□□□ -2.26
SCW11	YGL028C	MDM34	P53083	459 aa		0.93	□□□□□ -2.26
SCW11	YGL028C	SLX9	P53251	210 aa	Predicted RBP	0.93	□□□□□ -2.26
SCW11	YGL028C	MPP6	P53725	186 aa	Predicted RBP	0.93	□□□□□ -2.26
SCW11	YGL028C	ALG11	P53954	548 aa	Known RBP	0.93	□□□□□ -2.26
SCW11	YGL028C	PLB3	Q08108	686 aa		0.93	□□□□□ -2.26
SCW11	YGL028C	POX1	P13711	748 aa		0.92	□□□□□ -2.26
SCW11	YGL028C	DPB2	P24482	689 aa	Predicted RBP	0.92	□□□□□ -2.26
SCW11	YGL028C	HOM6	P31116	359 aa	Known RBP	0.92	□□□□□ -2.26
SCW11	YGL028C	CLB6	P32943	380 aa		0.92	□□□□□ -2.26
SCW11	YGL028C	PRS4	P38063	326 aa	Predicted RBP	0.92	□□□□□ -2.26
SCW11	YGL028C	SPT8	P38915	602 aa		0.92	□□□□□ -2.26
SCW11	YGL028C	YER188W	P40103	239 aa		0.92	□□□□□ -2.26
SCW11	YGL028C	GLG2	P47011	380 aa		0.92	□□□□□ -2.26
SCW11	YGL028C	YJR012C	P47087	207 aa		0.92	□□□□□ -2.26
SCW11	YGL028C	NIF3	P53081	288 aa		0.92	□□□□□ -2.26
SCW11	YGL028C	YGL034C	P53186	121 aa		0.92	□□□□□ -2.26
SCW11	YGL028C	EBS1	Q03466	884 aa	Known RBP	0.92	□□□□□ -2.26
SCW11	YGL028C	MYO5	Q04439	1219 aa	Known RBP	0.92	□□□□□ -2.26
SCW11	YGL028C	YMR114C	Q04471	368 aa	Known RBP	0.92	□□□□□ -2.26
SCW11	YGL028C	ADH6	Q04894	360 aa	Known RBP	0.92	□□□□□ -2.26
SCW11	YGL028C	COQ10	Q08058	207 aa		0.92	□□□□□ -2.26
SCW11	YGL028C	YPL150W	Q12152	901 aa		0.92	□□□□□ -2.26
SCW11	YGL028C	EMP46	Q12396	444 aa		0.92	□□□□□ -2.26
SCW11	YGL028C	RAD10	P06838	210 aa		0.91	□□□□□ -2.26
SCW11	YGL028C	SGA1	P08019	549 aa		0.91	□□□□□ -2.26
SCW11	YGL028C	VPS3	P23643	1011 aa		0.91	□□□□□ -2.26
SCW11	YGL028C	RNP1	P32385	249 aa		0.91	□□□□□ -2.26
SCW11	YGL028C	YBR096W	P38256	230 aa		0.91	□□□□□ -2.26
SCW11	YGL028C	THO1	P40040	218 aa	Known RBP	0.91	□□□□□ -2.26
SCW11	YGL028C	TIF34	P40217	347 aa	Known RBP	0.91	□□□□□ -2.26
SCW11	YGL028C	RPL10	P41805	221 aa	Known RBP	0.91	□□□□□ -2.26
SCW11	YGL028C	GON7	P46984	123 aa		0.91	□□□□□ -2.26
SCW11	YGL028C	YJL016W	P47072	561 aa		0.91	□□□□□ -2.26
SCW11	YGL028C	RGM1	Q00453	211 aa		0.91	□□□□□ -2.26
SCW11	YGL028C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	0.91	□□□□□ -2.26	not detected
SCW11	YGL028C	RSM10	Q03201	203 aa		0.91	□□□□□ -2.26
SCW11	YGL028C	CGI121	Q03705	181 aa	Known RBP	0.91	□□□□□ -2.26
SCW11	YGL028C	BOP2	Q06150	570 aa		0.91	□□□□□ -2.26
SCW11	YGL028C	SDO1	Q07953	250 aa	Known RBP	0.91	□□□□□ -2.26
SCW11	YGL028C	RRT8	Q08219	342 aa		0.91	□□□□□ -2.26
SCW11	YGL028C	GEP5	Q12393	293 aa		0.91	□□□□□ -2.26
SCW11	YGL028C	RSR1	P13856	272 aa		0.9	□□□□□ -2.26
SCW11	YGL028C	DAL82	P21705	255 aa		0.9	□□□□□ -2.26
SCW11	YGL028C	SCO1	P23833	295 aa		0.9	□□□□□ -2.26
SCW11	YGL028C	CWP1	P28319	239 aa		0.9	□□□□□ -2.26
SCW11	YGL028C	MAL32	P38158	584 aa		0.9	□□□□□ -2.26
SCW11	YGL028C	YGP1	P38616	354 aa	Known RBP	0.9	□□□□□ -2.26
SCW11	YGL028C	BIG1	P38813	335 aa		0.9	□□□□□ -2.26
SCW11	YGL028C	MRPL49	P40858	161 aa	Predicted RBP	0.9	□□□□□ -2.26
SCW11	YGL028C	MRH4	P53166	561 aa		0.9	□□□□□ -2.26
SCW11	YGL028C	MAL12	P53341	584 aa		0.9	□□□□□ -2.26
SCW11	YGL028C	COS6	P53344	381 aa		0.9	□□□□□ -2.26
SCW11	YGL028C	CTF19	Q02732	369 aa		0.9	□□□□□ -2.26
SCW11	YGL028C	PEX12	Q04370	399 aa		0.9	□□□□□ -2.26
SCW11	YGL028C	GRH1	Q04410	372 aa	Known RBP	0.9	□□□□□ -2.26
SCW11	YGL028C	PEX10	Q05568	337 aa		0.9	□□□□□ -2.26
SCW11	YGL028C	CSM4	Q08955	156 aa		0.9	□□□□□ -2.26
SCW11	YGL028C	YPR011C	Q12251	326 aa		0.9	□□□□□ -2.26
SCW11	YGL028C	YPL119C-A	Q3E751	87 aa		0.9	□□□□□ -2.26
SCW11	YGL028C	RAD3	P06839	778 aa		0.89	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 11 ms