RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W VIK1Q12045 647 aa3.9□□□□□ -1.79
DEG1YFL001W FOL3Q12676 427 aaPredicted RBP3.9□□□□□ -1.79
DEG1YFL001W RPS19AP07280 144 aaKnown RBP3.89□□□□□ -1.79
DEG1YFL001W RPS19BP07281 144 aaPredicted RBP3.89□□□□□ -1.79
DEG1YFL001W RPO26P20435 155 aa3.89□□□□□ -1.79
DEG1YFL001W RNA15P25299 296 aaPredicted RBP3.89□□□□□ -1.79
DEG1YFL001W RAD51P25454 400 aa3.89□□□□□ -1.79
DEG1YFL001W YER184CP39961 794 aa3.89□□□□□ -1.79
DEG1YFL001W ALD5P40047 520 aaKnown RBP3.89□□□□□ -1.79
DEG1YFL001W GLG2P47011 380 aa3.89□□□□□ -1.79
DEG1YFL001W YJR012CP47087 207 aa3.89□□□□□ -1.79
DEG1YFL001W YPS5P53057 165 aa3.89□□□□□ -1.79
DEG1YFL001W MRX11Q03079 207 aa3.89□□□□□ -1.79
DEG1YFL001W SEC13Q04491 297 aaKnown RBP3.89□□□□□ -1.79
DEG1YFL001W GTO3Q04806 366 aa3.89□□□□□ -1.79
DEG1YFL001W GIS3Q12418 502 aa3.89□□□□□ -1.79
DEG1YFL001W YOS9Q99220 542 aa3.89□□□□□ -1.79
DEG1YFL001W SWI1P09547 1314 aa3.88□□□□□ -1.79
DEG1YFL001W CDC13P32797 924 aaKnown RBP3.88□□□□□ -1.79
DEG1YFL001W TIP20P33891 701 aa3.88□□□□□ -1.79
DEG1YFL001W MBA1P38300 278 aa3.88□□□□□ -1.79
DEG1YFL001W GGC1P38988 300 aa3.88□□□□□ -1.79
DEG1YFL001W HOC1P47124 396 aa3.88□□□□□ -1.79
DEG1YFL001W CGR1P53188 120 aa3.88□□□□□ -1.79
DEG1YFL001W VPS60Q03390 229 aa3.88□□□□□ -1.79
DEG1YFL001W YDR209CQ03480 137 aa3.88□□□□□ -1.79
DEG1YFL001W SPO77Q06134 477 aa3.88□□□□□ -1.79
DEG1YFL001W SRO7Q12038 1033 aa3.88□□□□□ -1.79
DEG1YFL001W YDR018CQ12185 396 aa3.88□□□□□ -1.79
DEG1YFL001W SNF8Q12483 233 aa3.88□□□□□ -1.79
DEG1YFL001W YAL064W-BO13512 126 aa3.87□□□□□ -1.79
DEG1YFL001W JIP3O13555 125 aa3.87□□□□□ -1.79
DEG1YFL001W PEX3P28795 441 aa3.87□□□□□ -1.79
DEG1YFL001W RFT1P38206 574 aaPredicted RBP3.87□□□□□ -1.79
DEG1YFL001W SMB1P40018 196 aaKnown RBP3.87□□□□□ -1.79
DEG1YFL001W DSN1P40568 576 aa3.87□□□□□ -1.79
DEG1YFL001W HIT1P46973 164 aa3.87□□□□□ -1.79
DEG1YFL001W SWS2P53937 143 aa3.87□□□□□ -1.79
DEG1YFL001W RIM15P43565 1770 aa3.86□□□□□ -1.79
DEG1YFL001W TCP1P12612 559 aaKnown RBP3.86□□□□□ -1.79
DEG1YFL001W RPL24BP24000 155 aaKnown RBP3.86□□□□□ -1.79
DEG1YFL001W PPA2P28239 310 aa3.86□□□□□ -1.79
DEG1YFL001W TPS2P31688 896 aaKnown RBP3.86□□□□□ -1.79
DEG1YFL001W QRI5P32344 111 aa3.86□□□□□ -1.79
DEG1YFL001W ALK2P32789 676 aaPredicted RBP3.86□□□□□ -1.79
DEG1YFL001W FRM2P37261 193 aa3.86□□□□□ -1.79
DEG1YFL001W GPI18P38211 433 aa3.86□□□□□ -1.79
DEG1YFL001W SER33P40510 469 aa3.86□□□□□ -1.79
DEG1YFL001W RPC17P47076 161 aa3.86□□□□□ -1.79
DEG1YFL001W NBP35P52920 328 aa3.86□□□□□ -1.79
DEG1YFL001W RPL21AQ02753 160 aaKnown RBP3.86□□□□□ -1.79
DEG1YFL001W EBS1Q03466 884 aaKnown RBP3.86□□□□□ -1.79
DEG1YFL001W LOA1Q06508 300 aa3.86□□□□□ -1.79
DEG1YFL001W CDC36P06100 191 aaPredicted RBP3.85□□□□□ -1.79
DEG1YFL001W RHO1P06780 209 aaKnown RBP3.85□□□□□ -1.79
DEG1YFL001W PBN1P25580 416 aa3.85□□□□□ -1.79
DEG1YFL001W ATG15P25641 520 aa3.85□□□□□ -1.79
DEG1YFL001W HOM6P31116 359 aaKnown RBP3.85□□□□□ -1.79
DEG1YFL001W SIP3P38717 1229 aa3.85□□□□□ -1.79
DEG1YFL001W HSH155P49955 971 aaKnown RBP3.85□□□□□ -1.79
DEG1YFL001W API2Q04413 109 aa3.85□□□□□ -1.79
DEG1YFL001W NCB2Q92317 146 aa3.85□□□□□ -1.79
DEG1YFL001W COX4P04037 155 aa3.84□□□□□ -1.79
DEG1YFL001W ASP3-2P0CX77 362 aa3.84□□□□□ -1.79
DEG1YFL001W ASP3-3P0CX78 362 aa3.84□□□□□ -1.79
DEG1YFL001W ASP3-4P0CX79 362 aa3.84□□□□□ -1.79
DEG1YFL001W ASP3-1P0CZ17 362 aa3.84□□□□□ -1.79
DEG1YFL001W NHP6BP11633 99 aaKnown RBP3.84□□□□□ -1.79
DEG1YFL001W VPH2P32341 215 aa3.84□□□□□ -1.79
DEG1YFL001W THO1P40040 218 aaKnown RBP3.84□□□□□ -1.79
DEG1YFL001W RRG9P40156 214 aa3.84□□□□□ -1.79
DEG1YFL001W YFL064CP43540 174 aa3.84□□□□□ -1.79
DEG1YFL001W EAF6P47128 113 aa3.84□□□□□ -1.79
DEG1YFL001W JHD2P47156 728 aaPredicted RBP3.84□□□□□ -1.79
DEG1YFL001W PGU1P47180 361 aa3.84□□□□□ -1.79
DEG1YFL001W VEL1P53058 206 aa3.84□□□□□ -1.79
DEG1YFL001W COG7P53195 279 aa3.84□□□□□ -1.79
DEG1YFL001W FMP48P53233 369 aa3.84□□□□□ -1.79
DEG1YFL001W YNL247WP53852 767 aaKnown RBP3.84□□□□□ -1.79
DEG1YFL001W VHS1Q03785 461 aa3.84□□□□□ -1.79
DEG1YFL001W MHR1Q06630 226 aa3.84□□□□□ -1.79
DEG1YFL001W TRM10Q12400 293 aa3.84□□□□□ -1.79
DEG1YFL001W COQ1P18900 473 aa3.83□□□□□ -1.8
DEG1YFL001W MRPL25P23369 157 aa3.83□□□□□ -1.8
DEG1YFL001W VMA6P32366 345 aaKnown RBP3.83□□□□□ -1.8
DEG1YFL001W SPS19P32573 292 aaKnown RBP3.83□□□□□ -1.8
DEG1YFL001W MRPL3P36516 390 aa3.83□□□□□ -1.8
DEG1YFL001W USE1P53146 245 aa3.83□□□□□ -1.8
DEG1YFL001W LIF1P53150 421 aa3.83□□□□□ -1.8
DEG1YFL001W YNL095CP53932 642 aa3.83□□□□□ -1.8
DEG1YFL001W MRPS17Q03246 237 aaPredicted RBP3.83□□□□□ -1.8
DEG1YFL001W SDC1Q03323 175 aa3.83□□□□□ -1.8
DEG1YFL001W YPL278CQ08990 100 aa3.83□□□□□ -1.8
DEG1YFL001W THP2O13539 261 aaKnown RBP3.82□□□□□ -1.8
DEG1YFL001W YCR025CP25352 136 aa3.82□□□□□ -1.8
DEG1YFL001W VPS21P36017 210 aaKnown RBP3.82□□□□□ -1.8
DEG1YFL001W MRPL27P36526 146 aaPredicted RBP3.82□□□□□ -1.8
DEG1YFL001W SMP1P38128 452 aa3.82□□□□□ -1.8
DEG1YFL001W MRP21P38175 177 aa3.82□□□□□ -1.8
DEG1YFL001W KRE29P40026 464 aa3.82□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 103.5 ms