RNA–Protein interactions for RNA: YDR427W

RPN9, Transcript of Non-ATPase regulatory subunit of the 26S proteasome, yeast

Gene RPN9, Length 1,182 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN9	YDR427W	YOR268C	Q08734	132 aa		2.25	□□□□□ -2.05
RPN9	YDR427W	VPS68	Q12016	184 aa		2.25	□□□□□ -2.05
RPN9	YDR427W	YPL150W	Q12152	901 aa		2.25	□□□□□ -2.05
RPN9	YDR427W	NUP157	P40064	1391 aa	Known RBP	2.24	□□□□□ -2.05
RPN9	YDR427W	YEL009C-A	A0A023PZF2	135 aa		2.24	□□□□□ -2.05
RPN9	YDR427W	HIS1	P00498	297 aa	Known RBP	2.24	□□□□□ -2.05
RPN9	YDR427W	BMH1	P29311	267 aa	Known RBP	2.24	□□□□□ -2.05
RPN9	YDR427W	MNN5	P46982	586 aa		2.24	□□□□□ -2.05
RPN9	YDR427W	YJL118W	P47022	219 aa		2.24	□□□□□ -2.05
RPN9	YDR427W	MAL13	P53338	473 aa		2.24	□□□□□ -2.05
RPN9	YDR427W	MPP6	P53725	186 aa	Predicted RBP	2.24	□□□□□ -2.05
RPN9	YDR427W	OST6	Q03723	332 aa		2.24	□□□□□ -2.05
RPN9	YDR427W	YMR166C	Q03829	368 aa		2.24	□□□□□ -2.05
RPN9	YDR427W	ATC1	Q04005	294 aa		2.24	□□□□□ -2.05
RPN9	YDR427W	INO80	P53115	1489 aa		2.24	□□□□□ -2.05
RPN9	YDR427W	YHL049C	P38722	271 aa		2.23	□□□□□ -2.05
RPN9	YDR427W	YJR146W	P47174	117 aa		2.23	□□□□□ -2.05
RPN9	YDR427W	ALG11	P53954	548 aa	Known RBP	2.23	□□□□□ -2.05
RPN9	YDR427W	PLB3	Q08108	686 aa		2.23	□□□□□ -2.05
RPN9	YDR427W	YOL019W	Q08157	551 aa		2.23	□□□□□ -2.05
RPN9	YDR427W	SMT3	Q12306	101 aa	Known RBP	2.23	□□□□□ -2.05
RPN9	YDR427W	STH1	P32597	1359 aa		2.23	□□□□□ -2.05
RPN9	YDR427W	PPH21	P23594	369 aa		2.22	□□□□□ -2.05
RPN9	YDR427W	RPT5	P33297	434 aa	Known RBP	2.22	□□□□□ -2.05
RPN9	YDR427W	YHR045W	P38775	560 aa		2.22	□□□□□ -2.05
RPN9	YDR427W	DSN1	P40568	576 aa		2.22	□□□□□ -2.05
RPN9	YDR427W	MYO5	Q04439	1219 aa	Known RBP	2.22	□□□□□ -2.05
RPN9	YDR427W	YPL247C	Q12523	523 aa		2.22	□□□□□ -2.05
RPN9	YDR427W	MSF1	P08425	469 aa		2.21	□□□□□ -2.06
RPN9	YDR427W	DAL82	P21705	255 aa		2.21	□□□□□ -2.06
RPN9	YDR427W	GDH2	P33327	1092 aa	Known RBP	2.21	□□□□□ -2.06
RPN9	YDR427W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	2.21	□□□□□ -2.06	not detected
RPN9	YDR427W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	2.21	□□□□□ -2.06	not detected
RPN9	YDR427W	PRS2	P38620	318 aa	Known RBP	2.21	□□□□□ -2.06
RPN9	YDR427W	COG3	P40094	801 aa		2.21	□□□□□ -2.06
RPN9	YDR427W	AGX1	P43567	385 aa		2.21	□□□□□ -2.06
RPN9	YDR427W	YJR012C	P47087	207 aa		2.21	□□□□□ -2.06
RPN9	YDR427W	NBP1	P52919	319 aa	Predicted RBP	2.21	□□□□□ -2.06
RPN9	YDR427W	SLX9	P53251	210 aa	Predicted RBP	2.21	□□□□□ -2.06
RPN9	YDR427W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	2.21	□□□□□ -2.06	not detected
RPN9	YDR427W	GRH1	Q04410	372 aa	Known RBP	2.21	□□□□□ -2.06
RPN9	YDR427W	RDS3	Q06835	107 aa	Predicted RBP	2.21	□□□□□ -2.06
RPN9	YDR427W	RRT8	Q08219	342 aa		2.21	□□□□□ -2.06
RPN9	YDR427W	RAD10	P06838	210 aa		2.2	□□□□□ -2.06
RPN9	YDR427W	QRI5	P32344	111 aa		2.2	□□□□□ -2.06
RPN9	YDR427W	RPL10	P41805	221 aa	Known RBP	2.2	□□□□□ -2.06
RPN9	YDR427W	CAB4	P53332	305 aa		2.2	□□□□□ -2.06
RPN9	YDR427W	AAH1	P53909	347 aa		2.2	□□□□□ -2.06
RPN9	YDR427W	EBS1	Q03466	884 aa	Known RBP	2.2	□□□□□ -2.06
RPN9	YDR427W	CGI121	Q03705	181 aa	Known RBP	2.2	□□□□□ -2.06
RPN9	YDR427W	ADH6	Q04894	360 aa	Known RBP	2.2	□□□□□ -2.06
RPN9	YDR427W	SPO77	Q06134	477 aa		2.2	□□□□□ -2.06
RPN9	YDR427W	MRP1	P10662	321 aa	Known RBP	2.19	□□□□□ -2.06
RPN9	YDR427W	RSR1	P13856	272 aa		2.19	□□□□□ -2.06
RPN9	YDR427W	DPB2	P24482	689 aa	Predicted RBP	2.19	□□□□□ -2.06
RPN9	YDR427W	SFC1	P33303	322 aa		2.19	□□□□□ -2.06
RPN9	YDR427W	YUH1	P35127	236 aa		2.19	□□□□□ -2.06
RPN9	YDR427W	DRE2	P36152	348 aa		2.19	□□□□□ -2.06
RPN9	YDR427W	YJL028W	P47062	111 aa		2.19	□□□□□ -2.06
RPN9	YDR427W	NIF3	P53081	288 aa		2.19	□□□□□ -2.06
RPN9	YDR427W	PEX10	Q05568	337 aa		2.19	□□□□□ -2.06
RPN9	YDR427W	YOR283W	Q12040	230 aa	Known RBP	2.19	□□□□□ -2.06
RPN9	YDR427W	SNF8	Q12483	233 aa		2.19	□□□□□ -2.06
RPN9	YDR427W	EHD3	P28817	500 aa		2.18	□□□□□ -2.06
RPN9	YDR427W	MRX3	P38172	270 aa		2.18	□□□□□ -2.06
RPN9	YDR427W	BIG1	P38813	335 aa		2.18	□□□□□ -2.06
RPN9	YDR427W	SPT8	P38915	602 aa		2.18	□□□□□ -2.06
RPN9	YDR427W	TEM1	P38987	245 aa		2.18	□□□□□ -2.06
RPN9	YDR427W	YJL016W	P47072	561 aa		2.18	□□□□□ -2.06
RPN9	YDR427W	DSK2	P48510	373 aa		2.18	□□□□□ -2.06
RPN9	YDR427W	MDM34	P53083	459 aa		2.18	□□□□□ -2.06
RPN9	YDR427W	YMR114C	Q04471	368 aa	Known RBP	2.18	□□□□□ -2.06
RPN9	YDR427W	SDO1	Q07953	250 aa	Known RBP	2.18	□□□□□ -2.06
RPN9	YDR427W	BTS1	Q12051	335 aa		2.18	□□□□□ -2.06
RPN9	YDR427W	YOL107W	Q12239	342 aa		2.18	□□□□□ -2.06
RPN9	YDR427W	YPL119C-A	Q3E751	87 aa		2.18	□□□□□ -2.06
RPN9	YDR427W	POX1	P13711	748 aa		2.17	□□□□□ -2.06
RPN9	YDR427W	VPS3	P23643	1011 aa		2.17	□□□□□ -2.06
RPN9	YDR427W	CWP1	P28319	239 aa		2.17	□□□□□ -2.06
RPN9	YDR427W	PRS4	P38063	326 aa	Predicted RBP	2.17	□□□□□ -2.06
RPN9	YDR427W	YGP1	P38616	354 aa	Known RBP	2.17	□□□□□ -2.06
RPN9	YDR427W	SMB1	P40018	196 aa	Known RBP	2.17	□□□□□ -2.06
RPN9	YDR427W	TIF34	P40217	347 aa	Known RBP	2.17	□□□□□ -2.06
RPN9	YDR427W	GON7	P46984	123 aa		2.17	□□□□□ -2.06
RPN9	YDR427W	COS6	P53344	381 aa		2.17	□□□□□ -2.06
RPN9	YDR427W	EMI1	Q04406	187 aa		2.17	□□□□□ -2.06
RPN9	YDR427W	SUE1	Q06524	206 aa		2.17	□□□□□ -2.06
RPN9	YDR427W	ECM13	P38195	257 aa		2.16	□□□□□ -2.06
RPN9	YDR427W	MRPL49	P40858	161 aa	Predicted RBP	2.16	□□□□□ -2.06
RPN9	YDR427W	GLG2	P47011	380 aa		2.16	□□□□□ -2.06
RPN9	YDR427W	BOP2	Q06150	570 aa		2.16	□□□□□ -2.06
RPN9	YDR427W	TY3A-G	Q12173	290 aa		2.16	□□□□□ -2.06
RPN9	YDR427W	GEP5	Q12393	293 aa		2.16	□□□□□ -2.06
RPN9	YDR427W	TY3A-I	Q99219	290 aa		2.16	□□□□□ -2.06
RPN9	YDR427W	RAD3	P06839	778 aa		2.15	□□□□□ -2.07
RPN9	YDR427W	HOM6	P31116	359 aa	Known RBP	2.15	□□□□□ -2.07
RPN9	YDR427W	JEN1	P36035	616 aa		2.15	□□□□□ -2.07
RPN9	YDR427W	YGL034C	P53186	121 aa		2.15	□□□□□ -2.07
RPN9	YDR427W	SLM2	P53955	656 aa		2.15	□□□□□ -2.07
RPN9	YDR427W	SCO1	P23833	295 aa		2.14	□□□□□ -2.07

Retrieved 100 of 5,963 RNA–protein pairs in 78.2 ms