RNA–Protein interactions for RNA: YDL196W

YDL196W, Transcript of Dubious open reading frame, yeast

Gene YDL196W, Length 330 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDL196W	YDL196W	RRT8	Q08219	342 aa		0.74	□□□□□ -2.29
YDL196W	YDL196W	SLD7	Q08457	257 aa		0.74	□□□□□ -2.29
YDL196W	YDL196W	RRS1	Q08746	203 aa	Known RBP	0.74	□□□□□ -2.29
YDL196W	YDL196W	SGT2	Q12118	346 aa	Known RBP	0.74	□□□□□ -2.29
YDL196W	YDL196W	TIM22	Q12328	207 aa		0.74	□□□□□ -2.29
YDL196W	YDL196W	PST1	Q12355	444 aa		0.74	□□□□□ -2.29
YDL196W	YDL196W	MRX4	Q12467	430 aa		0.74	□□□□□ -2.29
YDL196W	YDL196W	YPL119C-A	Q3E751	87 aa		0.74	□□□□□ -2.29
YDL196W	YDL196W	AI5_BETA	Q9ZZX0	354 aa		0.74	□□□□□ -2.29
YDL196W	YDL196W	ZWF1	P11412	505 aa	Known RBP	0.73	□□□□□ -2.29
YDL196W	YDL196W	RPL24B	P24000	155 aa	Known RBP	0.73	□□□□□ -2.29
YDL196W	YDL196W	RSA4	P25382	515 aa	Known RBP	0.73	□□□□□ -2.29
YDL196W	YDL196W	YCR016W	P25617	290 aa	Known RBP	0.73	□□□□□ -2.29
YDL196W	YDL196W	HOM6	P31116	359 aa	Known RBP	0.73	□□□□□ -2.29
YDL196W	YDL196W	QRI5	P32344	111 aa		0.73	□□□□□ -2.29
YDL196W	YDL196W	RNP1	P32385	249 aa		0.73	□□□□□ -2.29
YDL196W	YDL196W	SSO1	P32867	290 aa		0.73	□□□□□ -2.29
YDL196W	YDL196W	SFC1	P33303	322 aa		0.73	□□□□□ -2.29
YDL196W	YDL196W	SGE1	P33335	543 aa		0.73	□□□□□ -2.29
YDL196W	YDL196W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	0.73	□□□□□ -2.29	not detected
YDL196W	YDL196W	JEN1	P36035	616 aa		0.73	□□□□□ -2.29
YDL196W	YDL196W	HMT1	P38074	348 aa		0.73	□□□□□ -2.29
YDL196W	YDL196W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	0.73	□□□□□ -2.29	RIP-Chip
YDL196W	YDL196W	YBR062C	P38239	180 aa		0.73	□□□□□ -2.29
YDL196W	YDL196W	CUE1	P38428	203 aa		0.73	□□□□□ -2.29
YDL196W	YDL196W	YGP1	P38616	354 aa	Known RBP	0.73	□□□□□ -2.29
YDL196W	YDL196W	YHR045W	P38775	560 aa		0.73	□□□□□ -2.29
YDL196W	YDL196W	BIG1	P38813	335 aa		0.73	□□□□□ -2.29
YDL196W	YDL196W	YHB1	P39676	399 aa	Known RBP	0.73	□□□□□ -2.29
YDL196W	YDL196W	THO1	P40040	218 aa	Known RBP	0.73	□□□□□ -2.29
YDL196W	YDL196W	COX15	P40086	486 aa		0.73	□□□□□ -2.29
YDL196W	YDL196W	SER33	P40510	469 aa		0.73	□□□□□ -2.29
YDL196W	YDL196W	GCN20	P43535	752 aa	Known RBP	0.73	□□□□□ -2.29
YDL196W	YDL196W	AGX1	P43567	385 aa		0.73	□□□□□ -2.29
YDL196W	YDL196W	ILM1	P47155	203 aa		0.73	□□□□□ -2.29
YDL196W	YDL196W	YJR141W	P47172	347 aa	Predicted RBP	0.73	□□□□□ -2.29
YDL196W	YDL196W	NIF3	P53081	288 aa		0.73	□□□□□ -2.29
YDL196W	YDL196W	YNL134C	P53912	376 aa	Known RBP	0.73	□□□□□ -2.29
YDL196W	YDL196W	YNL095C	P53932	642 aa		0.73	□□□□□ -2.29
YDL196W	YDL196W	SWS2	P53937	143 aa		0.73	□□□□□ -2.29
YDL196W	YDL196W	OSH6	Q02201	448 aa		0.73	□□□□□ -2.29
YDL196W	YDL196W	CWC21	Q03375	135 aa	Known RBP	0.73	□□□□□ -2.29
YDL196W	YDL196W	EBS1	Q03466	884 aa	Known RBP	0.73	□□□□□ -2.29
YDL196W	YDL196W	GOT1	Q03554	138 aa		0.73	□□□□□ -2.29
YDL196W	YDL196W	YDR124W	Q04608	324 aa		0.73	□□□□□ -2.29
YDL196W	YDL196W	YLR283W	Q05867	314 aa		0.73	□□□□□ -2.29
YDL196W	YDL196W	YPR098C	Q06089	161 aa		0.73	□□□□□ -2.29
YDL196W	YDL196W	BOP2	Q06150	570 aa		0.73	□□□□□ -2.29
YDL196W	YDL196W	YPR147C	Q06522	304 aa	Known RBP	0.73	□□□□□ -2.29
YDL196W	YDL196W	ARV1	Q06541	321 aa		0.73	□□□□□ -2.29
YDL196W	YDL196W	SYC1	Q08553	188 aa	Predicted RBP	0.73	□□□□□ -2.29
YDL196W	YDL196W	MSH5	Q12175	901 aa		0.73	□□□□□ -2.29
YDL196W	YDL196W	YCT1	Q12235	531 aa		0.73	□□□□□ -2.29
YDL196W	YDL196W	PRR2	Q12310	699 aa		0.73	□□□□□ -2.29
YDL196W	YDL196W	ATG5	Q12380	294 aa		0.73	□□□□□ -2.29
YDL196W	YDL196W	YAL063C-A	Q3E791	96 aa		0.73	□□□□□ -2.29
YDL196W	YDL196W	YBL008W-A	Q3E821	79 aa		0.73	□□□□□ -2.29
YDL196W	YDL196W	RPP0	P05317	312 aa	Known RBP	0.72	□□□□□ -2.29
YDL196W	YDL196W	ADH3	P07246	375 aa	Known RBP	0.72	□□□□□ -2.29
YDL196W	YDL196W	YKR104W	P0CE69	306 aa		0.72	□□□□□ -2.29
YDL196W	YDL196W	MRPL25	P23369	157 aa		0.72	□□□□□ -2.29
YDL196W	YDL196W	PRE7	P23724	241 aa	Known RBP	0.72	□□□□□ -2.29
YDL196W	YDL196W	DPB2	P24482	689 aa	Predicted RBP	0.72	□□□□□ -2.29
YDL196W	YDL196W	ATG15	P25641	520 aa		0.72	□□□□□ -2.29
YDL196W	YDL196W	PPA2	P28239	310 aa		0.72	□□□□□ -2.29
YDL196W	YDL196W	NTG1	P31378	399 aa		0.72	□□□□□ -2.29
YDL196W	YDL196W	UTR5	P32630	166 aa		0.72	□□□□□ -2.29
YDL196W	YDL196W	MSN4	P33749	630 aa		0.72	□□□□□ -2.29
YDL196W	YDL196W	YKR032W	P36127	104 aa		0.72	□□□□□ -2.29
YDL196W	YDL196W	MAL32	P38158	584 aa		0.72	□□□□□ -2.29
YDL196W	YDL196W	ATG12	P38316	186 aa		0.72	□□□□□ -2.29
YDL196W	YDL196W	YHL049C	P38722	271 aa		0.72	□□□□□ -2.29
YDL196W	YDL196W	COS8	P38723	381 aa		0.72	□□□□□ -2.29
YDL196W	YDL196W	ARN2	P38724	620 aa		0.72	□□□□□ -2.29
YDL196W	YDL196W	SMB1	P40018	196 aa	Known RBP	0.72	□□□□□ -2.29
YDL196W	YDL196W	YER085C	P40058	173 aa		0.72	□□□□□ -2.29
YDL196W	YDL196W	YER189W	P40104	122 aa		0.72	□□□□□ -2.29
YDL196W	YDL196W	YMR144W	P40214	342 aa	Known RBP	0.72	□□□□□ -2.29
YDL196W	YDL196W	PRE6	P40303	254 aa	Known RBP	0.72	□□□□□ -2.29
YDL196W	YDL196W	OST3	P48439	350 aa		0.72	□□□□□ -2.29
YDL196W	YDL196W	RMR1	P53060	241 aa		0.72	□□□□□ -2.29
YDL196W	YDL196W	YGL088W	P53151	121 aa		0.72	□□□□□ -2.29
YDL196W	YDL196W	MAL12	P53341	584 aa		0.72	□□□□□ -2.29
YDL196W	YDL196W	FMP41	P53889	259 aa	Known RBP	0.72	□□□□□ -2.29
YDL196W	YDL196W	RHO3	Q00245	231 aa	Known RBP	0.72	□□□□□ -2.29
YDL196W	YDL196W	SPG4	Q04438	115 aa		0.72	□□□□□ -2.29
YDL196W	YDL196W	SPO77	Q06134	477 aa		0.72	□□□□□ -2.29
YDL196W	YDL196W	RRP40	Q08285	240 aa	Known RBP	0.72	□□□□□ -2.29
YDL196W	YDL196W	TY3A-G	Q12173	290 aa		0.72	□□□□□ -2.29
YDL196W	YDL196W	YOR029W	Q12243	111 aa		0.72	□□□□□ -2.29
YDL196W	YDL196W	ATG31	Q12421	196 aa		0.72	□□□□□ -2.29
YDL196W	YDL196W	NCB2	Q92317	146 aa		0.72	□□□□□ -2.29
YDL196W	YDL196W	TY3A-I	Q99219	290 aa		0.72	□□□□□ -2.29
YDL196W	YDL196W	TDH2	P00358	332 aa	Known RBP	0.71	□□□□□ -2.3
YDL196W	YDL196W	HIS3	P06633	220 aa		0.71	□□□□□ -2.3
YDL196W	YDL196W	MET2	P08465	486 aa		0.71	□□□□□ -2.3
YDL196W	YDL196W	RPS23A	P0CX29	145 aa	Known RBP	0.71	□□□□□ -2.3
YDL196W	YDL196W	RPS23B	P0CX30	145 aa		0.71	□□□□□ -2.3
YDL196W	YDL196W	CDC42	P19073	191 aa		0.71	□□□□□ -2.3
YDL196W	YDL196W	RPB4	P20433	221 aa	Predicted RBP	0.71	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms