RNA–Protein interactions for RNA: YDL150W

RPC53, Transcript of RNA polymerase III subunit C53, yeast

Gene RPC53, Length 1,269 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPC53	YDL150W	VIK1	Q12045	647 aa		3.9	□□□□□ -1.79
RPC53	YDL150W	YOR342C	Q12182	319 aa		3.9	□□□□□ -1.79
RPC53	YDL150W	HHF1	P02309	103 aa	Known RBP	3.89	□□□□□ -1.79
RPC53	YDL150W	FES1	P38260	290 aa		3.89	□□□□□ -1.79
RPC53	YDL150W	TRR2	P38816	342 aa		3.89	□□□□□ -1.79
RPC53	YDL150W	MPM1	P40364	252 aa		3.89	□□□□□ -1.79
RPC53	YDL150W	SNL1	P40548	159 aa		3.89	□□□□□ -1.79
RPC53	YDL150W	YGR201C	P42936	225 aa		3.89	□□□□□ -1.79
RPC53	YDL150W	JHD2	P47156	728 aa	Predicted RBP	3.89	□□□□□ -1.79
RPC53	YDL150W	RRN5	Q02983	363 aa		3.89	□□□□□ -1.79
RPC53	YDL150W	NAT4	Q04751	285 aa		3.89	□□□□□ -1.79
RPC53	YDL150W	YMR226C	Q05016	267 aa	Known RBP	3.89	□□□□□ -1.79
RPC53	YDL150W	LOT6	Q07923	191 aa		3.89	□□□□□ -1.79
RPC53	YDL150W	TPT1	Q12272	230 aa	Known RBP	3.89	□□□□□ -1.79
RPC53	YDL150W	SFM1	Q12314	213 aa		3.89	□□□□□ -1.79
RPC53	YDL150W	YER078W-A	Q3E7A2	54 aa		3.89	□□□□□ -1.79
RPC53	YDL150W	PET9	P18239	318 aa	Known RBP	3.88	□□□□□ -1.79
RPC53	YDL150W	CPR4	P25334	318 aa		3.88	□□□□□ -1.79
RPC53	YDL150W	UTP25	P40498	721 aa	Known RBP	3.88	□□□□□ -1.79
RPC53	YDL150W	ICE2	P40499	491 aa		3.88	□□□□□ -1.79
RPC53	YDL150W	AGP3	P43548	558 aa		3.88	□□□□□ -1.79
RPC53	YDL150W	WWM1	P43582	211 aa	Known RBP	3.88	□□□□□ -1.79
RPC53	YDL150W	FAR7	P43592	221 aa		3.88	□□□□□ -1.79
RPC53	YDL150W	SFH5	P47008	294 aa		3.88	□□□□□ -1.79
RPC53	YDL150W	ALB1	P47019	175 aa	Predicted RBP	3.88	□□□□□ -1.79
RPC53	YDL150W	YJR141W	P47172	347 aa	Predicted RBP	3.88	□□□□□ -1.79
RPC53	YDL150W	PHB2	P50085	310 aa		3.88	□□□□□ -1.79
RPC53	YDL150W	TPC1	P53257	314 aa		3.88	□□□□□ -1.79
RPC53	YDL150W	MTQ1	P53944	314 aa		3.88	□□□□□ -1.79
RPC53	YDL150W	TPS1	Q00764	495 aa	Known RBP	3.88	□□□□□ -1.79
RPC53	YDL150W	STD1	Q02794	444 aa		3.88	□□□□□ -1.79
RPC53	YDL150W	YDR541C	Q03049	344 aa		3.88	□□□□□ -1.79
RPC53	YDL150W	YPR174C	Q06616	221 aa	Predicted RBP	3.88	□□□□□ -1.79
RPC53	YDL150W	YPR091C	Q06833	770 aa		3.88	□□□□□ -1.79
RPC53	YDL150W	MRX4	Q12467	430 aa		3.88	□□□□□ -1.79
RPC53	YDL150W	BLM10	P43583	2143 aa		3.88	□□□□□ -1.79
RPC53	YDL150W	RHO1	P06780	209 aa	Known RBP	3.87	□□□□□ -1.79
RPC53	YDL150W	YSF3	P0C074	85 aa	Predicted RBP	3.87	□□□□□ -1.79
RPC53	YDL150W	GPI12	P23797	304 aa		3.87	□□□□□ -1.79
RPC53	YDL150W	ARO2	P28777	376 aa	Known RBP	3.87	□□□□□ -1.79
RPC53	YDL150W	FAA1	P30624	700 aa	Known RBP	3.87	□□□□□ -1.79
RPC53	YDL150W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	3.87	□□□□□ -1.79	not detected
RPC53	YDL150W	YBL059W	P34224	193 aa		3.87	□□□□□ -1.79
RPC53	YDL150W	ATP3	P38077	311 aa	Known RBP	3.87	□□□□□ -1.79
RPC53	YDL150W	ECM34	P38728	170 aa		3.87	□□□□□ -1.79
RPC53	YDL150W	YER079W	P40052	210 aa	Known RBP	3.87	□□□□□ -1.79
RPC53	YDL150W	YIL067C	P40514	678 aa		3.87	□□□□□ -1.79
RPC53	YDL150W	GVP36	P40531	326 aa	Known RBP	3.87	□□□□□ -1.79
RPC53	YDL150W	NCA3	P46955	337 aa		3.87	□□□□□ -1.79
RPC53	YDL150W	APS3	P47064	194 aa		3.87	□□□□□ -1.79
RPC53	YDL150W	GPI8	P49018	411 aa		3.87	□□□□□ -1.79
RPC53	YDL150W	YGR067C	P53243	804 aa		3.87	□□□□□ -1.79
RPC53	YDL150W	SYF2	P53277	215 aa	Predicted RBP	3.87	□□□□□ -1.79
RPC53	YDL150W	HXT11	P54862	567 aa		3.87	□□□□□ -1.79
RPC53	YDL150W	YPL107W	Q02873	248 aa		3.87	□□□□□ -1.79
RPC53	YDL150W	PBA1	Q05778	276 aa		3.87	□□□□□ -1.79
RPC53	YDL150W	YPR172W	Q06608	200 aa		3.87	□□□□□ -1.79
RPC53	YDL150W	ERV2	Q12284	196 aa		3.87	□□□□□ -1.79
RPC53	YDL150W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	3.86	□□□□□ -1.79	not detected
RPC53	YDL150W	DEG1	P31115	442 aa	Known RBP	3.86	□□□□□ -1.79
RPC53	YDL150W	YOR062C	P36025	268 aa		3.86	□□□□□ -1.79
RPC53	YDL150W	COG3	P40094	801 aa		3.86	□□□□□ -1.79
RPC53	YDL150W	PDS1	P40316	373 aa	Predicted RBP	3.86	□□□□□ -1.79
RPC53	YDL150W	PRM5	P40476	318 aa		3.86	□□□□□ -1.79
RPC53	YDL150W	YRB2	P40517	327 aa		3.86	□□□□□ -1.79
RPC53	YDL150W	TOS2	P50078	622 aa		3.86	□□□□□ -1.79
RPC53	YDL150W	PRM8	P53174	237 aa		3.86	□□□□□ -1.79
RPC53	YDL150W	RHO5	P53879	331 aa	Known RBP	3.86	□□□□□ -1.79
RPC53	YDL150W	SWP1	Q02795	286 aa		3.86	□□□□□ -1.79
RPC53	YDL150W	INP1	Q03694	420 aa		3.86	□□□□□ -1.79
RPC53	YDL150W	SNT309	Q06091	175 aa	Predicted RBP	3.86	□□□□□ -1.79
RPC53	YDL150W	NDE2	Q07500	545 aa		3.86	□□□□□ -1.79
RPC53	YDL150W	YLR126C	Q12288	251 aa		3.86	□□□□□ -1.79
RPC53	YDL150W	PRP46	Q12417	451 aa	Predicted RBP	3.86	□□□□□ -1.79
RPC53	YDL150W	FAR1	P21268	830 aa		3.85	□□□□□ -1.79
RPC53	YDL150W	RRP7	P25368	297 aa	Predicted RBP	3.85	□□□□□ -1.79
RPC53	YDL150W	PMT2	P31382	759 aa		3.85	□□□□□ -1.79
RPC53	YDL150W	MRPL6	P32904	214 aa		3.85	□□□□□ -1.79
RPC53	YDL150W	ARC19	P33204	171 aa	Known RBP	3.85	□□□□□ -1.79
RPC53	YDL150W	MRPL4	P36517	319 aa		3.85	□□□□□ -1.79
RPC53	YDL150W	APE4	P38821	490 aa		3.85	□□□□□ -1.79
RPC53	YDL150W	SPO73	P40031	143 aa		3.85	□□□□□ -1.79
RPC53	YDL150W	EMC2	P47133	292 aa	Known RBP	3.85	□□□□□ -1.79
RPC53	YDL150W	NUP57	P48837	541 aa		3.85	□□□□□ -1.79
RPC53	YDL150W	YGR168C	P53293	376 aa		3.85	□□□□□ -1.79
RPC53	YDL150W	DBP6	P53734	629 aa	Known RBP	3.85	□□□□□ -1.79
RPC53	YDL150W	PRP3	Q03338	469 aa	Predicted RBP	3.85	□□□□□ -1.79
RPC53	YDL150W	RNH202	Q05635	350 aa		3.85	□□□□□ -1.79
RPC53	YDL150W	ARV1	Q06541	321 aa		3.85	□□□□□ -1.79
RPC53	YDL150W	RAX1	Q08760	435 aa		3.85	□□□□□ -1.79
RPC53	YDL150W	YOR214C	Q12282	236 aa		3.85	□□□□□ -1.79
RPC53	YDL150W	PSF1	Q12488	208 aa		3.85	□□□□□ -1.79
RPC53	YDL150W	MHF1	Q3E835	90 aa		3.85	□□□□□ -1.79
RPC53	YDL150W	SEC16	P48415	2195 aa	Known RBP	3.85	□□□□□ -1.79
RPC53	YDL150W	RPL6B	P05739	176 aa	Known RBP	3.84	□□□□□ -1.79
RPC53	YDL150W	RPC40	P07703	335 aa	Known RBP	3.84	□□□□□ -1.79
RPC53	YDL150W	KSS1	P14681	368 aa		3.84	□□□□□ -1.79
RPC53	YDL150W	STP22	P25604	385 aa		3.84	□□□□□ -1.79
RPC53	YDL150W	NAM9	P27929	486 aa		3.84	□□□□□ -1.79
RPC53	YDL150W	ASF2	P32448	525 aa	Predicted RBP	3.84	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms