RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	YPR098C	Q06089	161 aa		4.16	□□□□□ -1.74
RPN5	YDL147W	YDL211C	Q12121	372 aa		4.16	□□□□□ -1.74
RPN5	YDL147W	YPL150W	Q12152	901 aa		4.16	□□□□□ -1.74
RPN5	YDL147W	RFM1	Q12192	310 aa		4.16	□□□□□ -1.74
RPN5	YDL147W	TCP1	P12612	559 aa	Known RBP	4.15	□□□□□ -1.75
RPN5	YDL147W	SYS1	P41544	203 aa		4.15	□□□□□ -1.75
RPN5	YDL147W	FLC3	P53121	802 aa		4.15	□□□□□ -1.75
RPN5	YDL147W	GTO3	Q04806	366 aa		4.15	□□□□□ -1.75
RPN5	YDL147W	SPO77	Q06134	477 aa		4.15	□□□□□ -1.75
RPN5	YDL147W	CPT1	P17898	393 aa		4.14	□□□□□ -1.75
RPN5	YDL147W	RPS5	P26783	225 aa	Known RBP	4.14	□□□□□ -1.75
RPN5	YDL147W	SGE1	P33335	543 aa		4.14	□□□□□ -1.75
RPN5	YDL147W	CUE1	P38428	203 aa		4.14	□□□□□ -1.75
RPN5	YDL147W	YHL049C	P38722	271 aa		4.14	□□□□□ -1.75
RPN5	YDL147W	PIN3	Q06449	215 aa		4.14	□□□□□ -1.75
RPN5	YDL147W	VMA6	P32366	345 aa	Known RBP	4.13	□□□□□ -1.75
RPN5	YDL147W	HMT1	P38074	348 aa		4.13	□□□□□ -1.75
RPN5	YDL147W	YJR079W	P47126	109 aa		4.13	□□□□□ -1.75
RPN5	YDL147W	RHO3	Q00245	231 aa	Known RBP	4.13	□□□□□ -1.75
RPN5	YDL147W	DXO1	Q06349	442 aa		4.13	□□□□□ -1.75
RPN5	YDL147W	YPR147C	Q06522	304 aa	Known RBP	4.13	□□□□□ -1.75
RPN5	YDL147W	PBN1	P25580	416 aa		4.12	□□□□□ -1.75
RPN5	YDL147W	RSM27	P53305	110 aa		4.12	□□□□□ -1.75
RPN5	YDL147W	SMD1	Q02260	146 aa	Predicted RBP	4.12	□□□□□ -1.75
RPN5	YDL147W	PLB3	Q08108	686 aa		4.12	□□□□□ -1.75
RPN5	YDL147W	CCH1	P50077	2039 aa		4.11	□□□□□ -1.75
RPN5	YDL147W	THP2	O13539	261 aa	Known RBP	4.11	□□□□□ -1.75
RPN5	YDL147W	RHO1	P06780	209 aa	Known RBP	4.11	□□□□□ -1.75
RPN5	YDL147W	ARG80	P07249	177 aa		4.11	□□□□□ -1.75
RPN5	YDL147W	CUP2	P15315	225 aa		4.11	□□□□□ -1.75
RPN5	YDL147W	COQ1	P18900	473 aa		4.11	□□□□□ -1.75
RPN5	YDL147W	RPO26	P20435	155 aa		4.11	□□□□□ -1.75
RPN5	YDL147W	VPS21	P36017	210 aa	Known RBP	4.11	□□□□□ -1.75
RPN5	YDL147W	MRPL39	P36533	70 aa		4.11	□□□□□ -1.75
RPN5	YDL147W	TRR2	P38816	342 aa		4.11	□□□□□ -1.75
RPN5	YDL147W	COX15	P40086	486 aa		4.11	□□□□□ -1.75
RPN5	YDL147W	RPC17	P47076	161 aa		4.11	□□□□□ -1.75
RPN5	YDL147W	JHD2	P47156	728 aa	Predicted RBP	4.11	□□□□□ -1.75
RPN5	YDL147W	UFD1	P53044	361 aa		4.11	□□□□□ -1.75
RPN5	YDL147W	ZRG17	P53735	605 aa		4.11	□□□□□ -1.75
RPN5	YDL147W	AAH1	P53909	347 aa		4.11	□□□□□ -1.75
RPN5	YDL147W	BNA7	Q04066	261 aa		4.11	□□□□□ -1.75
RPN5	YDL147W	IES3	Q12345	250 aa		4.11	□□□□□ -1.75
RPN5	YDL147W	GIS3	Q12418	502 aa		4.11	□□□□□ -1.75
RPN5	YDL147W	YHL044W	P38727	235 aa		4.1	□□□□□ -1.75
RPN5	YDL147W	TVP15	Q03860	143 aa		4.1	□□□□□ -1.75
RPN5	YDL147W	ATG5	Q12380	294 aa		4.1	□□□□□ -1.75
RPN5	YDL147W	ADF1	Q2V2Q1	113 aa		4.1	□□□□□ -1.75
RPN5	YDL147W	SOD1	P00445	154 aa	Known RBP	4.09	□□□□□ -1.75
RPN5	YDL147W	CSG2	P35206	410 aa		4.09	□□□□□ -1.75
RPN5	YDL147W	MIC12	P38341	106 aa		4.09	□□□□□ -1.75
RPN5	YDL147W	SNZ3	P43545	298 aa		4.09	□□□□□ -1.75
RPN5	YDL147W	CTF19	Q02732	369 aa		4.09	□□□□□ -1.75
RPN5	YDL147W	DCR2	Q05924	578 aa		4.09	□□□□□ -1.75
RPN5	YDL147W	COQ10	Q08058	207 aa		4.09	□□□□□ -1.75
RPN5	YDL147W	CDC36	P06100	191 aa	Predicted RBP	4.08	□□□□□ -1.76
RPN5	YDL147W	YKR104W	P0CE69	306 aa		4.08	□□□□□ -1.76
RPN5	YDL147W	YAK1	P14680	807 aa		4.08	□□□□□ -1.76
RPN5	YDL147W	YHR127W	P38833	243 aa	Known RBP	4.08	□□□□□ -1.76
RPN5	YDL147W	SNZ2	P53824	298 aa		4.08	□□□□□ -1.76
RPN5	YDL147W	OSH6	Q02201	448 aa		4.08	□□□□□ -1.76
RPN5	YDL147W	SPG4	Q04438	115 aa		4.08	□□□□□ -1.76
RPN5	YDL147W	YPS3	Q12303	508 aa		4.08	□□□□□ -1.76
RPN5	YDL147W	YEL009C-A	A0A023PZF2	135 aa		4.07	□□□□□ -1.76
RPN5	YDL147W	MAL32	P38158	584 aa		4.07	□□□□□ -1.76
RPN5	YDL147W	YBL081W	P38180	368 aa	Known RBP	4.07	□□□□□ -1.76
RPN5	YDL147W	YBR096W	P38256	230 aa		4.07	□□□□□ -1.76
RPN5	YDL147W	SIP3	P38717	1229 aa		4.07	□□□□□ -1.76
RPN5	YDL147W	ARN2	P38724	620 aa		4.07	□□□□□ -1.76
RPN5	YDL147W	GOS1	P38736	223 aa		4.07	□□□□□ -1.76
RPN5	YDL147W	PRE6	P40303	254 aa	Known RBP	4.07	□□□□□ -1.76
RPN5	YDL147W	YIR035C	P40579	254 aa		4.07	□□□□□ -1.76
RPN5	YDL147W	NIF3	P53081	288 aa		4.07	□□□□□ -1.76
RPN5	YDL147W	MAL12	P53341	584 aa		4.07	□□□□□ -1.76
RPN5	YDL147W	HST4	P53688	370 aa		4.07	□□□□□ -1.76
RPN5	YDL147W	YPL264C	Q08980	353 aa		4.07	□□□□□ -1.76
RPN5	YDL147W	NCB2	Q92317	146 aa		4.07	□□□□□ -1.76
RPN5	YDL147W	STE18	P18852	110 aa		4.06	□□□□□ -1.76
RPN5	YDL147W	YMR31	P19955	123 aa		4.06	□□□□□ -1.76
RPN5	YDL147W	PRE7	P23724	241 aa	Known RBP	4.06	□□□□□ -1.76
RPN5	YDL147W	YCR102C	P25608	368 aa		4.06	□□□□□ -1.76
RPN5	YDL147W	SSO1	P32867	290 aa		4.06	□□□□□ -1.76
RPN5	YDL147W	SSH1	P38353	490 aa	Known RBP	4.06	□□□□□ -1.76
RPN5	YDL147W	YRB1	P41920	201 aa	Known RBP	4.06	□□□□□ -1.76
RPN5	YDL147W	RRP40	Q08285	240 aa	Known RBP	4.06	□□□□□ -1.76
RPN5	YDL147W	YBL008W-A	Q3E821	79 aa		4.06	□□□□□ -1.76
RPN5	YDL147W	YBR121C-A	P0C5L4	52 aa		4.05	□□□□□ -1.76
RPN5	YDL147W	EHD3	P28817	500 aa		4.05	□□□□□ -1.76
RPN5	YDL147W	DRE2	P36152	348 aa		4.05	□□□□□ -1.76
RPN5	YDL147W	RIB1	P38066	345 aa		4.05	□□□□□ -1.76
RPN5	YDL147W	TRM7	P38238	310 aa	Known RBP	4.05	□□□□□ -1.76
RPN5	YDL147W	SPL2	P38839	148 aa		4.05	□□□□□ -1.76
RPN5	YDL147W	SUR2	P38992	349 aa		4.05	□□□□□ -1.76
RPN5	YDL147W	GOT1	Q03554	138 aa		4.05	□□□□□ -1.76
RPN5	YDL147W	YDR124W	Q04608	324 aa		4.05	□□□□□ -1.76
RPN5	YDL147W	YLR126C	Q12288	251 aa		4.05	□□□□□ -1.76
RPN5	YDL147W	SEY1	Q99287	776 aa		4.05	□□□□□ -1.76
RPN5	YDL147W	CDC10	P25342	322 aa	Known RBP	4.04	□□□□□ -1.76
RPN5	YDL147W	YHB1	P39676	399 aa	Known RBP	4.04	□□□□□ -1.76
RPN5	YDL147W	YMR166C	Q03829	368 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms