RNA–Protein interactions for RNA: YDL060W

TSR1, Transcript of Protein required for processing of 20S pre-rRNA in the cytoplasm, yeastyeast

Gene TSR1, Length 2,367 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR1YDL060W MIR1P23641 311 aaKnown RBP3.32□□□□□ -1.88
TSR1YDL060W YCR102CP25608 368 aa3.32□□□□□ -1.88
TSR1YDL060W SPO23P33757 523 aa3.32□□□□□ -1.88
TSR1YDL060W MRPL3P36516 390 aa3.32□□□□□ -1.88
TSR1YDL060W PRS4P38063 326 aaPredicted RBP3.32□□□□□ -1.88
TSR1YDL060W YBR056WP38081 501 aa3.32□□□□□ -1.88
TSR1YDL060W SHO1P40073 367 aa3.32□□□□□ -1.88
TSR1YDL060W CUS2P53830 285 aaPredicted RBP3.32□□□□□ -1.88
TSR1YDL060W SWF1Q04629 336 aa3.32□□□□□ -1.88
TSR1YDL060W SDO1Q07953 250 aaKnown RBP3.32□□□□□ -1.88
TSR1YDL060W ILV1P00927 576 aaKnown RBP3.31□□□□□ -1.88
TSR1YDL060W CDC33P07260 213 aaKnown RBP3.31□□□□□ -1.88
TSR1YDL060W CAP2P13517 287 aa3.31□□□□□ -1.88
TSR1YDL060W SAM2P19358 384 aaKnown RBP3.31□□□□□ -1.88
TSR1YDL060W ZRC1P20107 442 aa3.31□□□□□ -1.88
TSR1YDL060W POP5P28005 173 aa3.31□□□□□ -1.88
TSR1YDL060W COX13P32799 129 aa3.31□□□□□ -1.88
TSR1YDL060W MNS1P32906 549 aa3.31□□□□□ -1.88
TSR1YDL060W YNK1P36010 153 aaKnown RBP3.31□□□□□ -1.88
TSR1YDL060W FRE2P36033 711 aa3.31□□□□□ -1.88
TSR1YDL060W BMT2P38278 337 aa3.31□□□□□ -1.88
TSR1YDL060W IPT1P38954 527 aa3.31□□□□□ -1.88
TSR1YDL060W LYS1P38998 373 aaRIP-Chip data3.31□□□□□ -1.88not detected
TSR1YDL060W SOP4P39543 234 aaPredicted RBP3.31□□□□□ -1.88
TSR1YDL060W PCL6P40038 420 aa3.31□□□□□ -1.88
TSR1YDL060W COG3P40094 801 aa3.31□□□□□ -1.88
TSR1YDL060W YIR016WP40572 265 aa3.31□□□□□ -1.88
TSR1YDL060W AIM23P47015 356 aa3.31□□□□□ -1.88
TSR1YDL060W COX16P47081 118 aa3.31□□□□□ -1.88
TSR1YDL060W RRN9P53437 365 aa3.31□□□□□ -1.88
TSR1YDL060W SNO1Q03144 224 aa3.31□□□□□ -1.88
TSR1YDL060W TRM82Q03774 444 aa3.31□□□□□ -1.88
TSR1YDL060W RUB1Q03919 77 aa3.31□□□□□ -1.88
TSR1YDL060W PBP4Q07362 185 aaKnown RBP3.31□□□□□ -1.88
TSR1YDL060W PLB3Q08108 686 aa3.31□□□□□ -1.88
TSR1YDL060W DSE3Q08729 430 aa3.31□□□□□ -1.88
TSR1YDL060W MUM3Q08750 479 aa3.31□□□□□ -1.88
TSR1YDL060W PFA4Q12006 378 aa3.31□□□□□ -1.88
TSR1YDL060W RPN6Q12377 434 aa3.31□□□□□ -1.88
TSR1YDL060W DCN1Q12395 269 aa3.31□□□□□ -1.88
TSR1YDL060W YPR145C-AQ2V2P0 78 aa3.31□□□□□ -1.88
TSR1YDL060W BCY1P07278 416 aaKnown RBP3.31□□□□□ -1.88
TSR1YDL060W PET9P18239 318 aaKnown RBP3.31□□□□□ -1.88
TSR1YDL060W PUT3P25502 979 aaPredicted RBP3.31□□□□□ -1.88
TSR1YDL060W YPT52P36018 234 aaKnown RBP3.31□□□□□ -1.88
TSR1YDL060W YCR041WP37265 110 aa3.31□□□□□ -1.88
TSR1YDL060W PFS1P38872 237 aa3.31□□□□□ -1.88
TSR1YDL060W GAA1P39012 614 aa3.31□□□□□ -1.88
TSR1YDL060W COA1P40452 197 aa3.31□□□□□ -1.88
TSR1YDL060W BUD13P46947 266 aaPredicted RBP3.31□□□□□ -1.88
TSR1YDL060W PRP24P49960 444 aaKnown RBP3.31□□□□□ -1.88
TSR1YDL060W FRE4P53746 719 aa3.31□□□□□ -1.88
TSR1YDL060W RPL22BP56628 122 aaKnown RBP3.31□□□□□ -1.88
TSR1YDL060W GPI11Q06636 219 aa3.31□□□□□ -1.88
TSR1YDL060W YPQ1Q12010 308 aa3.31□□□□□ -1.88
TSR1YDL060W SRL2Q12020 392 aa3.31□□□□□ -1.88
TSR1YDL060W AGC1Q12482 902 aa3.31□□□□□ -1.88
TSR1YDL060W YPR014CQ6B0W2 109 aa3.31□□□□□ -1.88
TSR1YDL060W DAL82P21705 255 aa3.3□□□□□ -1.88
TSR1YDL060W YCR007CP25354 239 aa3.3□□□□□ -1.88
TSR1YDL060W ADE1P27616 306 aa3.3□□□□□ -1.88
TSR1YDL060W CAT2P32796 670 aaKnown RBP3.3□□□□□ -1.88
TSR1YDL060W SPC34P36131 295 aa3.3□□□□□ -1.88
TSR1YDL060W IST2P38250 946 aa3.3□□□□□ -1.88
TSR1YDL060W PAN6P40459 309 aa3.3□□□□□ -1.88
TSR1YDL060W SIM1P40472 476 aa3.3□□□□□ -1.88
TSR1YDL060W DOC1P53068 250 aa3.3□□□□□ -1.88
TSR1YDL060W MKC7P53379 596 aa3.3□□□□□ -1.88
TSR1YDL060W NUP49Q02199 472 aa3.3□□□□□ -1.88
TSR1YDL060W MSS11Q03825 758 aa3.3□□□□□ -1.88
TSR1YDL060W SPO77Q06134 477 aa3.3□□□□□ -1.88
TSR1YDL060W RRG7Q08774 242 aaPredicted RBP3.3□□□□□ -1.88
TSR1YDL060W RRI1Q12468 440 aa3.3□□□□□ -1.88
TSR1YDL060W YPL247CQ12523 523 aa3.3□□□□□ -1.88
TSR1YDL060W RIB3Q99258 208 aa3.3□□□□□ -1.88
TSR1YDL060W VPS13Q07878 3144 aa3.3□□□□□ -1.88
TSR1YDL060W MET2P08465 486 aa3.3□□□□□ -1.88
TSR1YDL060W REV1P12689 985 aa3.3□□□□□ -1.88
TSR1YDL060W ARF2P19146 181 aaKnown RBP3.3□□□□□ -1.88
TSR1YDL060W LSB5P25369 354 aa3.3□□□□□ -1.88
TSR1YDL060W JHD2P47156 728 aaPredicted RBP3.3□□□□□ -1.88
TSR1YDL060W YGL039WP53183 348 aaKnown RBP3.3□□□□□ -1.88
TSR1YDL060W TRM112P53738 135 aaPredicted RBP3.3□□□□□ -1.88
TSR1YDL060W YPL080CQ02826 108 aa3.3□□□□□ -1.88
TSR1YDL060W YPL113CQ02961 396 aa3.3□□□□□ -1.88
TSR1YDL060W PRM6Q04705 352 aa3.3□□□□□ -1.88
TSR1YDL060W ADH6Q04894 360 aaKnown RBP3.3□□□□□ -1.88
TSR1YDL060W BER1Q06688 274 aaKnown RBP3.3□□□□□ -1.88
TSR1YDL060W SLD7Q08457 257 aa3.3□□□□□ -1.88
TSR1YDL060W EAF3Q12432 401 aa3.3□□□□□ -1.88
TSR1YDL060W PCC1Q3E833 88 aa3.3□□□□□ -1.88
TSR1YDL060W TCP1P12612 559 aaKnown RBP3.29□□□□□ -1.88
TSR1YDL060W FBA1P14540 359 aaKnown RBP3.29□□□□□ -1.88
TSR1YDL060W HSP26P15992 214 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88not detected
TSR1YDL060W IFM1P25038 676 aa3.29□□□□□ -1.88
TSR1YDL060W SKT5P34226 696 aa3.29□□□□□ -1.88
TSR1YDL060W DTR1P38125 572 aa3.29□□□□□ -1.88
TSR1YDL060W RFC4P40339 323 aaKnown RBP3.29□□□□□ -1.88
TSR1YDL060W ABM1P47146 123 aa3.29□□□□□ -1.88
TSR1YDL060W SNN1P48232 102 aa3.29□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 60.4 ms