RNA–Protein interactions for RNA: YBR098W

MMS4, Transcript of Subunit of structure-specific Mms4p-Mus81p endonuclease, yeast

Gene MMS4, Length 2,076 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MMS4	YBR098W	CAB3	P36076	571 aa		0.85	□□□□□ -2.27
MMS4	YBR098W	SUR2	P38992	349 aa		0.85	□□□□□ -2.27
MMS4	YBR098W	DDI1	P40087	428 aa		0.85	□□□□□ -2.27
MMS4	YBR098W	MDM34	P53083	459 aa		0.85	□□□□□ -2.27
MMS4	YBR098W	CAB4	P53332	305 aa		0.85	□□□□□ -2.27
MMS4	YBR098W	CLP1	Q08685	445 aa	Predicted RBP	0.85	□□□□□ -2.27
MMS4	YBR098W	YPR011C	Q12251	326 aa		0.85	□□□□□ -2.27
MMS4	YBR098W	SME1	Q12330	94 aa	Predicted RBP	0.85	□□□□□ -2.27
MMS4	YBR098W	NOT5	Q12514	560 aa	Predicted RBP	0.85	□□□□□ -2.27
MMS4	YBR098W	YPL119C-A	Q3E751	87 aa		0.85	□□□□□ -2.27
MMS4	YBR098W	RPL24A	P04449	155 aa	Known RBP	0.84	□□□□□ -2.27
MMS4	YBR098W	ZWF1	P11412	505 aa	Known RBP	0.84	□□□□□ -2.27
MMS4	YBR098W	TCP1	P12612	559 aa	Known RBP	0.84	□□□□□ -2.27
MMS4	YBR098W	RSR1	P13856	272 aa		0.84	□□□□□ -2.27
MMS4	YBR098W	COY1	P34237	679 aa		0.84	□□□□□ -2.27
MMS4	YBR098W	EBP2	P36049	427 aa	Known RBP	0.84	□□□□□ -2.27
MMS4	YBR098W	YJL028W	P47062	111 aa		0.84	□□□□□ -2.27
MMS4	YBR098W	YJR012C	P47087	207 aa		0.84	□□□□□ -2.27
MMS4	YBR098W	HSH155	P49955	971 aa	Known RBP	0.84	□□□□□ -2.27
MMS4	YBR098W	NIF3	P53081	288 aa		0.84	□□□□□ -2.27
MMS4	YBR098W	ALG11	P53954	548 aa	Known RBP	0.84	□□□□□ -2.27
MMS4	YBR098W	MIX17	Q03667	156 aa		0.84	□□□□□ -2.27
MMS4	YBR098W	SDO1	Q07953	250 aa	Known RBP	0.84	□□□□□ -2.27
MMS4	YBR098W	YOR268C	Q08734	132 aa		0.84	□□□□□ -2.27
MMS4	YBR098W	TY3A-G	Q12173	290 aa		0.84	□□□□□ -2.27
MMS4	YBR098W	YPL247C	Q12523	523 aa		0.84	□□□□□ -2.27
MMS4	YBR098W	TY3A-I	Q99219	290 aa		0.84	□□□□□ -2.27
MMS4	YBR098W	RAD3	P06839	778 aa		0.84	□□□□□ -2.28
MMS4	YBR098W	PPH21	P23594	369 aa		0.84	□□□□□ -2.28
MMS4	YBR098W	GDH2	P33327	1092 aa	Known RBP	0.84	□□□□□ -2.28
MMS4	YBR098W	JEN1	P36035	616 aa		0.84	□□□□□ -2.28
MMS4	YBR098W	PRS4	P38063	326 aa	Predicted RBP	0.84	□□□□□ -2.28
MMS4	YBR098W	PRS2	P38620	318 aa	Known RBP	0.84	□□□□□ -2.28
MMS4	YBR098W	YHR045W	P38775	560 aa		0.84	□□□□□ -2.28
MMS4	YBR098W	DSN1	P40568	576 aa		0.84	□□□□□ -2.28
MMS4	YBR098W	RPL10	P41805	221 aa	Known RBP	0.84	□□□□□ -2.28
MMS4	YBR098W	SNZ3	P43545	298 aa		0.84	□□□□□ -2.28
MMS4	YBR098W	JHD2	P47156	728 aa	Predicted RBP	0.84	□□□□□ -2.28
MMS4	YBR098W	YJR146W	P47174	117 aa		0.84	□□□□□ -2.28
MMS4	YBR098W	TIM21	P53220	239 aa		0.84	□□□□□ -2.28
MMS4	YBR098W	YLR179C	Q06252	201 aa	Known RBP	0.84	□□□□□ -2.28
MMS4	YBR098W	RDS3	Q06835	107 aa	Predicted RBP	0.84	□□□□□ -2.28
MMS4	YBR098W	BTS1	Q12051	335 aa		0.84	□□□□□ -2.28
MMS4	YBR098W	ATG31	Q12421	196 aa		0.84	□□□□□ -2.28
MMS4	YBR098W	SWI1	P09547	1314 aa		0.83	□□□□□ -2.28
MMS4	YBR098W	NUP157	P40064	1391 aa	Known RBP	0.83	□□□□□ -2.28
MMS4	YBR098W	DAL82	P21705	255 aa		0.83	□□□□□ -2.28
MMS4	YBR098W	BNA6	P43619	295 aa		0.83	□□□□□ -2.28
MMS4	YBR098W	IGO1	P53897	168 aa		0.83	□□□□□ -2.28
MMS4	YBR098W	AAH1	P53909	347 aa		0.83	□□□□□ -2.28
MMS4	YBR098W	DIA1	P54005	336 aa		0.83	□□□□□ -2.28
MMS4	YBR098W	PEX10	Q05568	337 aa		0.83	□□□□□ -2.28
MMS4	YBR098W	COQ10	Q08058	207 aa		0.83	□□□□□ -2.28
MMS4	YBR098W	YPL150W	Q12152	901 aa		0.83	□□□□□ -2.28
MMS4	YBR098W	MSH5	Q12175	901 aa		0.83	□□□□□ -2.28
MMS4	YBR098W	GEP5	Q12393	293 aa		0.83	□□□□□ -2.28
MMS4	YBR098W	YPL229W	Q99395	206 aa		0.83	□□□□□ -2.28
MMS4	YBR098W	HOM6	P31116	359 aa	Known RBP	0.82	□□□□□ -2.28
MMS4	YBR098W	MRX3	P38172	270 aa		0.82	□□□□□ -2.28
MMS4	YBR098W	ECM13	P38195	257 aa		0.82	□□□□□ -2.28
MMS4	YBR098W	PET100	P38958	111 aa		0.82	□□□□□ -2.28
MMS4	YBR098W	AGX1	P43567	385 aa		0.82	□□□□□ -2.28
MMS4	YBR098W	GON7	P46984	123 aa		0.82	□□□□□ -2.28
MMS4	YBR098W	SNZ2	P53824	298 aa		0.82	□□□□□ -2.28
MMS4	YBR098W	RSM10	Q03201	203 aa		0.82	□□□□□ -2.28
MMS4	YBR098W	YMR114C	Q04471	368 aa	Known RBP	0.82	□□□□□ -2.28
MMS4	YBR098W	YDR114C	Q04597	100 aa		0.82	□□□□□ -2.28
MMS4	YBR098W	ADH6	Q04894	360 aa	Known RBP	0.82	□□□□□ -2.28
MMS4	YBR098W	BOP2	Q06150	570 aa		0.82	□□□□□ -2.28
MMS4	YBR098W	CFT1	Q06632	1357 aa	Known RBP	0.82	□□□□□ -2.28
MMS4	YBR098W	MRP1	P10662	321 aa	Known RBP	0.82	□□□□□ -2.28
MMS4	YBR098W	POX1	P13711	748 aa		0.82	□□□□□ -2.28
MMS4	YBR098W	DPB2	P24482	689 aa	Predicted RBP	0.82	□□□□□ -2.28
MMS4	YBR098W	RSA4	P25382	515 aa	Known RBP	0.82	□□□□□ -2.28
MMS4	YBR098W	GOS1	P38736	223 aa		0.82	□□□□□ -2.28
MMS4	YBR098W	SHC1	P39000	512 aa		0.82	□□□□□ -2.28
MMS4	YBR098W	BUD13	P46947	266 aa	Predicted RBP	0.82	□□□□□ -2.28
MMS4	YBR098W	SYF2	P53277	215 aa	Predicted RBP	0.82	□□□□□ -2.28
MMS4	YBR098W	RSM27	P53305	110 aa		0.82	□□□□□ -2.28
MMS4	YBR098W	RRN5	Q02983	363 aa		0.82	□□□□□ -2.28
MMS4	YBR098W	YLR173W	Q06247	608 aa		0.82	□□□□□ -2.28
MMS4	YBR098W	SNF8	Q12483	233 aa		0.82	□□□□□ -2.28
MMS4	YBR098W	ISD11	Q6Q560	94 aa		0.82	□□□□□ -2.28
MMS4	YBR098W	FKS1	P38631	1876 aa	Known RBP	0.81	□□□□□ -2.28
MMS4	YBR098W	YEL009C-A	A0A023PZF2	135 aa		0.81	□□□□□ -2.28
MMS4	YBR098W	YPR096C	O13587	100 aa		0.81	□□□□□ -2.28
MMS4	YBR098W	YKR104W	P0CE69	306 aa		0.81	□□□□□ -2.28
MMS4	YBR098W	MATALPHA1	P0CY06	175 aa		0.81	□□□□□ -2.28
MMS4	YBR098W	HMLALPHA1	P0CY07	175 aa		0.81	□□□□□ -2.28
MMS4	YBR098W	DPM1	P14020	267 aa	Known RBP	0.81	□□□□□ -2.28
MMS4	YBR098W	SFC1	P33303	322 aa		0.81	□□□□□ -2.28
MMS4	YBR098W	MSA2	P36157	363 aa		0.81	□□□□□ -2.28
MMS4	YBR098W	MAL32	P38158	584 aa		0.81	□□□□□ -2.28
MMS4	YBR098W	MAL12	P53341	584 aa		0.81	□□□□□ -2.28
MMS4	YBR098W	ASI3	P53983	676 aa		0.81	□□□□□ -2.28
MMS4	YBR098W	GRH1	Q04410	372 aa	Known RBP	0.81	□□□□□ -2.28
MMS4	YBR098W	MSA1	Q08471	629 aa		0.81	□□□□□ -2.28
MMS4	YBR098W	YBL008W-A	Q3E821	79 aa		0.81	□□□□□ -2.28
MMS4	YBR098W	YHR139C-A	O13536	103 aa		0.8	□□□□□ -2.28
MMS4	YBR098W	SGA1	P08019	549 aa		0.8	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms