RNA–Protein interactions for RNA: LSR1

LSR1, Transcript of U2 spliceosomal RNA (U2 snRNA), component of the spliceosome, yeastyeast

Gene LSR1, Length 1,175 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSR1LSR1 YIL024CP40543 189 aa7.78□□□□□ -1.16
LSR1LSR1 BUD8P41698 603 aa7.78□□□□□ -1.16
LSR1LSR1 PHO23P50947 330 aa7.78□□□□□ -1.16
LSR1LSR1 EKI1Q03764 534 aa7.78□□□□□ -1.16
LSR1LSR1 STP3Q05937 343 aa7.78□□□□□ -1.16
LSR1LSR1 YPD1Q07688 167 aa7.78□□□□□ -1.16
LSR1LSR1 ENB1Q08299 606 aa7.78□□□□□ -1.16
LSR1LSR1 TFB5Q3E7C1 72 aaPredicted RBP7.78□□□□□ -1.16
LSR1LSR1 MCM1P11746 286 aa7.77□□□□□ -1.17
LSR1LSR1 CPR4P25334 318 aa7.77□□□□□ -1.17
LSR1LSR1 PPA2P28239 310 aa7.77□□□□□ -1.17
LSR1LSR1 SLC1P33333 303 aa7.77□□□□□ -1.17
LSR1LSR1 YKL162CP36052 402 aa7.77□□□□□ -1.17
LSR1LSR1 RMD6P39975 231 aa7.77□□□□□ -1.17
LSR1LSR1 GTT1P40582 234 aa7.77□□□□□ -1.17
LSR1LSR1 LYS5P50113 272 aa7.77□□□□□ -1.17
LSR1LSR1 YLR152CP54072 576 aa7.77□□□□□ -1.17
LSR1LSR1 SMX3P54999 86 aaPredicted RBP7.77□□□□□ -1.17
LSR1LSR1 CTF19Q02732 369 aa7.77□□□□□ -1.17
LSR1LSR1 VBA4Q04602 768 aaKnown RBP7.77□□□□□ -1.17
LSR1LSR1 TFC7Q12415 435 aa7.77□□□□□ -1.17
LSR1LSR1 YOR343CQ12484 108 aa7.77□□□□□ -1.17
LSR1LSR1 VMA9Q3E7B6 73 aa7.77□□□□□ -1.17
LSR1LSR1 YLR358CO13565 187 aa7.76□□□□□ -1.17
LSR1LSR1 HNM1P19807 563 aa7.76□□□□□ -1.17
LSR1LSR1 MCM10P32354 571 aa7.76□□□□□ -1.17
LSR1LSR1 MTC7P32633 139 aa7.76□□□□□ -1.17
LSR1LSR1 LNP1P38878 278 aa7.76□□□□□ -1.17
LSR1LSR1 YIL067CP40514 678 aa7.76□□□□□ -1.17
LSR1LSR1 CIN2P46670 268 aa7.76□□□□□ -1.17
LSR1LSR1 YHC3P47040 408 aa7.76□□□□□ -1.17
LSR1LSR1 MCM22P47167 239 aa7.76□□□□□ -1.17
LSR1LSR1 BXI1P48558 297 aa7.76□□□□□ -1.17
LSR1LSR1 SEH1P53011 349 aaKnown RBP7.76□□□□□ -1.17
LSR1LSR1 NIF3P53081 288 aa7.76□□□□□ -1.17
LSR1LSR1 MTM1P53320 366 aa7.76□□□□□ -1.17
LSR1LSR1 SCW4P53334 386 aaKnown RBP7.76□□□□□ -1.17
LSR1LSR1 PEX25Q02969 394 aa7.76□□□□□ -1.17
LSR1LSR1 BNA7Q04066 261 aa7.76□□□□□ -1.17
LSR1LSR1 PAL1Q05518 499 aaKnown RBP7.76□□□□□ -1.17
LSR1LSR1 SYM1Q06563 197 aa7.76□□□□□ -1.17
LSR1LSR1 SDO1Q07953 250 aaKnown RBP7.76□□□□□ -1.17
LSR1LSR1 BSC6Q08280 497 aa7.76□□□□□ -1.17
LSR1LSR1 YJR112W-AQ3E743 109 aa7.76□□□□□ -1.17
LSR1LSR1 ARO3P14843 370 aaKnown RBP7.75□□□□□ -1.17
LSR1LSR1 URA6P15700 204 aa7.75□□□□□ -1.17
LSR1LSR1 STE18P18852 110 aa7.75□□□□□ -1.17
LSR1LSR1 IFM1P25038 676 aa7.75□□□□□ -1.17
LSR1LSR1 TRR1P29509 319 aaKnown RBP7.75□□□□□ -1.17
LSR1LSR1 PAN3P36102 679 aaPredicted RBP7.75□□□□□ -1.17
LSR1LSR1 PRS3P38689 320 aaKnown RBP7.75□□□□□ -1.17
LSR1LSR1 YHR180WP38868 163 aa7.75□□□□□ -1.17
LSR1LSR1 MRX5P47007 382 aa7.75□□□□□ -1.17
LSR1LSR1 BUL1P48524 976 aa7.75□□□□□ -1.17
LSR1LSR1 NIT3P49954 291 aa7.75□□□□□ -1.17
LSR1LSR1 BRR6P53062 197 aa7.75□□□□□ -1.17
LSR1LSR1 YGR066CP53242 292 aa7.75□□□□□ -1.17
LSR1LSR1 SUN4P53616 420 aa7.75□□□□□ -1.17
LSR1LSR1 RHO5P53879 331 aaKnown RBP7.75□□□□□ -1.17
LSR1LSR1 PET191Q02772 108 aa7.75□□□□□ -1.17
LSR1LSR1 SNX41Q04053 625 aa7.75□□□□□ -1.17
LSR1LSR1 YPL272CQ08984 517 aa7.75□□□□□ -1.17
LSR1LSR1 HBN1Q96VH4 193 aa7.75□□□□□ -1.17
LSR1LSR1 ISN1Q99312 450 aa7.75□□□□□ -1.17
LSR1LSR1 BEM2P39960 2167 aaKnown RBP7.74□□□□□ -1.17
LSR1LSR1 CDC7P06243 507 aa7.74□□□□□ -1.17
LSR1LSR1 SGA1P08019 549 aa7.74□□□□□ -1.17
LSR1LSR1 YSF3P0C074 85 aaPredicted RBP7.74□□□□□ -1.17
LSR1LSR1 RPL1AP0CX43 217 aaKnown RBP7.74□□□□□ -1.17
LSR1LSR1 RPL1BP0CX44 217 aaKnown RBP7.74□□□□□ -1.17
LSR1LSR1 HOG1P32485 435 aa7.74□□□□□ -1.17
LSR1LSR1 EMP70P32802 667 aa7.74□□□□□ -1.17
LSR1LSR1 SNC2P33328 115 aa7.74□□□□□ -1.17
LSR1LSR1 PPZ2P33329 710 aa7.74□□□□□ -1.17
LSR1LSR1 COS9P36034 407 aa7.74□□□□□ -1.17
LSR1LSR1 SRP102P36057 244 aaPredicted RBP7.74□□□□□ -1.17
LSR1LSR1 KAE1P36132 386 aa7.74□□□□□ -1.17
LSR1LSR1 CDS1P38221 457 aa7.74□□□□□ -1.17
LSR1LSR1 SEN34P39707 275 aa7.74□□□□□ -1.17
LSR1LSR1 PUG1P40100 303 aa7.74□□□□□ -1.17
LSR1LSR1 YJR141WP47172 347 aaPredicted RBP7.74□□□□□ -1.17
LSR1LSR1 PDR16P53860 351 aaKnown RBP7.74□□□□□ -1.17
LSR1LSR1 APM1Q00776 475 aaPredicted RBP7.74□□□□□ -1.17
LSR1LSR1 YLR030WQ07967 263 aa7.74□□□□□ -1.17
LSR1LSR1 FAS1P07149 2051 aaKnown RBP7.74□□□□□ -1.17
LSR1LSR1 TPI1P00942 248 aaKnown RBP7.73□□□□□ -1.17
LSR1LSR1 IMG1P25626 169 aa7.73□□□□□ -1.17
LSR1LSR1 TIP1P27654 210 aaPredicted RBP7.73□□□□□ -1.17
LSR1LSR1 ARO4P32449 370 aaKnown RBP7.73□□□□□ -1.17
LSR1LSR1 RPD3P32561 433 aa7.73□□□□□ -1.17
LSR1LSR1 SHM2P37291 469 aaKnown RBP7.73□□□□□ -1.17
LSR1LSR1 SSH1P38353 490 aaKnown RBP7.73□□□□□ -1.17
LSR1LSR1 YIL086CP40503 102 aa7.73□□□□□ -1.17
LSR1LSR1 ACS2P52910 683 aaKnown RBP7.73□□□□□ -1.17
LSR1LSR1 RMD9P53140 646 aaKnown RBP7.73□□□□□ -1.17
LSR1LSR1 YGR026WP53217 278 aa7.73□□□□□ -1.17
LSR1LSR1 YLR460CP54007 376 aa7.73□□□□□ -1.17
LSR1LSR1 ERV25P54837 211 aaKnown RBP7.73□□□□□ -1.17
LSR1LSR1 EST3Q03096 181 aa7.73□□□□□ -1.17
LSR1LSR1 NRG1Q03125 231 aa7.73□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms