RNA–Protein interactions for RNA: ENST00000489857.5

FAM3D-204, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 3

Gene FAM3D, Length 633 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-204ENST00000489857 ARHGEF3Q9NR81 526 aa16.66■□□□□ 0.26
FAM3D-204ENST00000489857 PARP2Q9UGN5 583 aa16.66■□□□□ 0.26
FAM3D-204ENST00000489857 NUMBLQ9Y6R0 609 aa16.66■□□□□ 0.26
FAM3D-204ENST00000489857 ZMYM2Q9UBW7 1377 aa16.65■□□□□ 0.26
FAM3D-204ENST00000489857 CACNA1AO00555 2505 aa16.65■□□□□ 0.26
FAM3D-204ENST00000489857 TDRD15B5MCY1 1934 aaKnown RBP16.65■□□□□ 0.26
FAM3D-204ENST00000489857 WNT7AO00755 349 aa16.65■□□□□ 0.26
FAM3D-204ENST00000489857 TADA2AO75478 443 aa16.65■□□□□ 0.26
FAM3D-204ENST00000489857 DCNP07585 359 aaKnown RBP16.65■□□□□ 0.26
FAM3D-204ENST00000489857 HSP90AA2PQ14568 343 aaPredicted RBP16.65■□□□□ 0.26
FAM3D-204ENST00000489857 SPECC1Q5M775 1068 aa16.65■□□□□ 0.26
FAM3D-204ENST00000489857 ERMP1Q7Z2K6 904 aa16.65■□□□□ 0.26
FAM3D-204ENST00000489857 PIGOQ8TEQ8 1089 aa16.65■□□□□ 0.26
FAM3D-204ENST00000489857 RPP25Q9BUL9 199 aaKnown RBP16.65■□□□□ 0.26
FAM3D-204ENST00000489857 GPRC5CQ9NQ84 441 aa16.65■□□□□ 0.26
FAM3D-204ENST00000489857 SLC2A4RGQ9NR83 387 aa16.65■□□□□ 0.26
FAM3D-204ENST00000489857 ORC3Q9UBD5 711 aaPredicted RBP16.65■□□□□ 0.26
FAM3D-204ENST00000489857 PCDHA12Q9UN75 941 aa16.65■□□□□ 0.26
FAM3D-204ENST00000489857 SF3B1O75533 1304 aaKnown RBP eCLIP16.65■□□□□ 0.26
FAM3D-204ENST00000489857 USO1O60763 962 aaKnown RBP16.64■□□□□ 0.25
FAM3D-204ENST00000489857 LMNAP02545 664 aaKnown RBP16.64■□□□□ 0.25
FAM3D-204ENST00000489857 FDPSP14324 419 aaKnown RBP16.64■□□□□ 0.25
FAM3D-204ENST00000489857 FSHRP23945 695 aa16.64■□□□□ 0.25
FAM3D-204ENST00000489857 KRT2P35908 639 aa16.64■□□□□ 0.25
FAM3D-204ENST00000489857 NTHL1P78549 312 aa16.64■□□□□ 0.25
FAM3D-204ENST00000489857 CREMQ03060 361 aa16.64■□□□□ 0.25
FAM3D-204ENST00000489857 CALCRLQ16602 461 aa16.64■□□□□ 0.25
FAM3D-204ENST00000489857 DCLRE1AQ6PJP8 1040 aa16.64■□□□□ 0.25
FAM3D-204ENST00000489857 KCNG4Q8TDN1 519 aa16.64■□□□□ 0.25
FAM3D-204ENST00000489857 HASPINQ8TF76 798 aa16.64■□□□□ 0.25
FAM3D-204ENST00000489857 CCDC43Q96MW1 224 aaKnown RBP16.64■□□□□ 0.25
FAM3D-204ENST00000489857 CLSTN3Q9BQT9 956 aa16.64■□□□□ 0.25
FAM3D-204ENST00000489857 TTC12Q9H892 705 aaPredicted RBP16.64■□□□□ 0.25
FAM3D-204ENST00000489857 FBXW11Q9UKB1 542 aa16.64■□□□□ 0.25
FAM3D-204ENST00000489857 CASTOR2A6NHX0 329 aa16.63■□□□□ 0.25
FAM3D-204ENST00000489857 LRRIQ4A6NIV6 560 aa16.63■□□□□ 0.25
FAM3D-204ENST00000489857 TTLL13PA6NNM8 815 aa16.63■□□□□ 0.25
FAM3D-204ENST00000489857 KIF4AO95239 1232 aa16.63■□□□□ 0.25
FAM3D-204ENST00000489857 GLULP15104 373 aa16.63■□□□□ 0.25
FAM3D-204ENST00000489857 TUSC3Q13454 348 aa16.63■□□□□ 0.25
FAM3D-204ENST00000489857 PARM1Q6UWI2 310 aa16.63■□□□□ 0.25
FAM3D-204ENST00000489857 PPP4R3CPQ6ZMV5 832 aa16.63■□□□□ 0.25
FAM3D-204ENST00000489857 MAEAQ7L5Y9 396 aa16.63■□□□□ 0.25
FAM3D-204ENST00000489857 GRASPQ7Z6J2 395 aaPredicted RBP16.63■□□□□ 0.25
FAM3D-204ENST00000489857 LNX1Q8TBB1 728 aaPredicted RBP16.63■□□□□ 0.25
FAM3D-204ENST00000489857 PIK3R5Q8WYR1 880 aa16.63■□□□□ 0.25
FAM3D-204ENST00000489857 FGF14Q92915 247 aa16.63■□□□□ 0.25
FAM3D-204ENST00000489857 FOXQ1Q9C009 403 aa16.63■□□□□ 0.25
FAM3D-204ENST00000489857 CXCL16Q9H2A7 254 aa16.63■□□□□ 0.25
FAM3D-204ENST00000489857 SEMA4AQ9H3S1 761 aa16.63■□□□□ 0.25
FAM3D-204ENST00000489857 SIT1Q9Y3P8 196 aa16.63■□□□□ 0.25
FAM3D-204ENST00000489857 WDR87Q6ZQQ6 2873 aa16.62■□□□□ 0.25
FAM3D-204ENST00000489857 POTEMA6NI47 508 aa16.62■□□□□ 0.25
FAM3D-204ENST00000489857 PTGESO14684 152 aa16.62■□□□□ 0.25
FAM3D-204ENST00000489857 ADAM12O43184 909 aa16.62■□□□□ 0.25
FAM3D-204ENST00000489857 LRRN2O75325 713 aa16.62■□□□□ 0.25
FAM3D-204ENST00000489857 SP9P0CG40 484 aa16.62■□□□□ 0.25
FAM3D-204ENST00000489857 TXKP42681 527 aa16.62■□□□□ 0.25
FAM3D-204ENST00000489857 GPC5P78333 572 aa16.62■□□□□ 0.25
FAM3D-204ENST00000489857 NAB2Q15742 525 aa16.62■□□□□ 0.25
FAM3D-204ENST00000489857 FAM171A1Q5VUB5 890 aa16.62■□□□□ 0.25
FAM3D-204ENST00000489857 CDCA2Q69YH5 1023 aaPredicted RBP16.62■□□□□ 0.25
FAM3D-204ENST00000489857 WASF1Q92558 559 aa16.62■□□□□ 0.25
FAM3D-204ENST00000489857 MTMR9Q96QG7 549 aa16.62■□□□□ 0.25
FAM3D-204ENST00000489857 TTPALQ9BTX7 342 aa16.62■□□□□ 0.25
FAM3D-204ENST00000489857 FZD8Q9H461 694 aa16.62■□□□□ 0.25
FAM3D-204ENST00000489857 PRMT7Q9NVM4 692 aaPredicted RBP16.62■□□□□ 0.25
FAM3D-204ENST00000489857 CDH7Q9ULB5 785 aa16.62■□□□□ 0.25
FAM3D-204ENST00000489857 ZFP37Q9Y6Q3 630 aaPredicted RBP16.62■□□□□ 0.25
FAM3D-204ENST00000489857 DCHS1Q96JQ0 3298 aa16.62■□□□□ 0.25
FAM3D-204ENST00000489857 MTCL1Q9Y4B5 1905 aaKnown RBP16.62■□□□□ 0.25
FAM3D-204ENST00000489857 NEMFO60524 1076 aa16.61■□□□□ 0.25
FAM3D-204ENST00000489857 C8AP07357 584 aa16.61■□□□□ 0.25
FAM3D-204ENST00000489857 HNRNPA1P09651 372 aaKnown RBP eCLIP16.61■□□□□ 0.25
FAM3D-204ENST00000489857 SPATA31C1P0DKV0 1188 aa16.61■□□□□ 0.25
FAM3D-204ENST00000489857 XRCC6P12956 609 aaKnown RBP eCLIP16.61■□□□□ 0.25
FAM3D-204ENST00000489857 STARD6P59095 220 aa16.61■□□□□ 0.25
FAM3D-204ENST00000489857 PSMD5Q16401 504 aa16.61■□□□□ 0.25
FAM3D-204ENST00000489857 LIN9Q5TKA1 542 aa16.61■□□□□ 0.25
FAM3D-204ENST00000489857 CEP57Q86XR8 500 aa16.61■□□□□ 0.25
FAM3D-204ENST00000489857 C1orf210Q8IVY1 113 aa16.61■□□□□ 0.25
FAM3D-204ENST00000489857 PJA1Q8NG27 643 aa16.61■□□□□ 0.25
FAM3D-204ENST00000489857 PRIMPOLQ96LW4 560 aa16.61■□□□□ 0.25
FAM3D-204ENST00000489857 PDZD7Q9H5P4 517 aa16.61■□□□□ 0.25
FAM3D-204ENST00000489857 BRMS1Q9HCU9 246 aa16.61■□□□□ 0.25
FAM3D-204ENST00000489857 SNTG2Q9NY99 539 aa16.61■□□□□ 0.25
FAM3D-204ENST00000489857 USP20Q9Y2K6 914 aa16.61■□□□□ 0.25
FAM3D-204ENST00000489857 COL4A3Q01955 1670 aa16.6■□□□□ 0.25
FAM3D-204ENST00000489857 BTBD18B2RXH4 712 aa16.6■□□□□ 0.25
FAM3D-204ENST00000489857 CCL16O15467 120 aa16.6■□□□□ 0.25
FAM3D-204ENST00000489857 RECQL4O94761 1208 aa16.6■□□□□ 0.25
FAM3D-204ENST00000489857 EDN1P05305 212 aa16.6■□□□□ 0.25
FAM3D-204ENST00000489857 FAM187BQ17R55 369 aa16.6■□□□□ 0.25
FAM3D-204ENST00000489857 PPM1LQ5SGD2 360 aa16.6■□□□□ 0.25
FAM3D-204ENST00000489857 MAML2Q8IZL2 1156 aaPredicted RBP16.6■□□□□ 0.25
FAM3D-204ENST00000489857 NECAB1Q8N987 351 aa16.6■□□□□ 0.25
FAM3D-204ENST00000489857 ITFG1Q8TB96 612 aa16.6■□□□□ 0.25
FAM3D-204ENST00000489857 BSNDQ8WZ55 320 aa16.6■□□□□ 0.25
FAM3D-204ENST00000489857 FGF13Q92913 245 aa16.6■□□□□ 0.25
FAM3D-204ENST00000489857 RMDN1Q96DB5 314 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms