RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 MAKP20794 623 aa6.7□□□□□ -1.34
CCDC66-219ENST00000484441 ZFP36P26651 326 aaKnown RBP6.7□□□□□ -1.34
CCDC66-219ENST00000484441 APOBEC3AP31941 199 aaPredicted RBP6.7□□□□□ -1.34
CCDC66-219ENST00000484441 PTGS2P35354 604 aa6.7□□□□□ -1.34
CCDC66-219ENST00000484441 SLC6A9P48067 706 aa6.7□□□□□ -1.34
CCDC66-219ENST00000484441 AMOTL1Q8IY63 956 aa6.7□□□□□ -1.34
CCDC66-219ENST00000484441 ZNF276Q8N554 614 aa6.7□□□□□ -1.34
CCDC66-219ENST00000484441 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.7□□□□□ -1.34
CCDC66-219ENST00000484441 SLC35B2Q8TB61 432 aa6.7□□□□□ -1.34
CCDC66-219ENST00000484441 CASKIN2Q8WXE0 1202 aa6.7□□□□□ -1.34
CCDC66-219ENST00000484441 ADI1Q9BV57 179 aa6.7□□□□□ -1.34
CCDC66-219ENST00000484441 MMRN2Q9H8L6 949 aa6.7□□□□□ -1.34
CCDC66-219ENST00000484441 SLC2A4RGQ9NR83 387 aa6.7□□□□□ -1.34
CCDC66-219ENST00000484441 TRHDEQ9UKU6 1024 aa6.7□□□□□ -1.34
CCDC66-219ENST00000484441 SORCS3Q9UPU3 1222 aa6.7□□□□□ -1.34
CCDC66-219ENST00000484441 PCDHGA2Q9Y5H1 932 aa6.7□□□□□ -1.34
CCDC66-219ENST00000484441 FAM171A2A8MVW0 826 aa6.69□□□□□ -1.34
CCDC66-219ENST00000484441 ALG1L2C9J202 215 aa6.69□□□□□ -1.34
CCDC66-219ENST00000484441 LEFTY2O00292 366 aa6.69□□□□□ -1.34
CCDC66-219ENST00000484441 ZSCAN20P17040 1043 aaPredicted RBP6.69□□□□□ -1.34
CCDC66-219ENST00000484441 MGAT1P26572 445 aa6.69□□□□□ -1.34
CCDC66-219ENST00000484441 GUCY2FP51841 1108 aa6.69□□□□□ -1.34
CCDC66-219ENST00000484441 PTTG1IPP53801 180 aa6.69□□□□□ -1.34
CCDC66-219ENST00000484441 METRNLQ641Q3 311 aa6.69□□□□□ -1.34
CCDC66-219ENST00000484441 ZFPM1Q8IX07 1006 aa6.69□□□□□ -1.34
CCDC66-219ENST00000484441 OR10H5Q8NGA6 315 aa6.69□□□□□ -1.34
CCDC66-219ENST00000484441 OR2I1PQ8NGU4 316 aa6.69□□□□□ -1.34
CCDC66-219ENST00000484441 DCLRE1CQ96SD1 692 aaKnown RBP6.69□□□□□ -1.34
CCDC66-219ENST00000484441 SLC46A2Q9BY10 475 aa6.69□□□□□ -1.34
CCDC66-219ENST00000484441 BRINP2Q9C0B6 783 aa6.69□□□□□ -1.34
CCDC66-219ENST00000484441 LANCL2Q9NS86 450 aa6.69□□□□□ -1.34
CCDC66-219ENST00000484441 FAM30AQ9NZY2 134 aa6.69□□□□□ -1.34
CCDC66-219ENST00000484441 ZBTB21Q9ULJ3 1066 aa6.69□□□□□ -1.34
CCDC66-219ENST00000484441 DIRC3C9JPN6 131 aa6.68□□□□□ -1.34
CCDC66-219ENST00000484441 GABRDO14764 452 aa6.68□□□□□ -1.34
CCDC66-219ENST00000484441 RECQL4O94761 1208 aa6.68□□□□□ -1.34
CCDC66-219ENST00000484441 SNRPA1P09661 255 aaKnown RBP6.68□□□□□ -1.34
CCDC66-219ENST00000484441 PTPN7P35236 360 aa6.68□□□□□ -1.34
CCDC66-219ENST00000484441 CLRN1P58418 232 aa6.68□□□□□ -1.34
CCDC66-219ENST00000484441 MRGPREQ86SM8 312 aa6.68□□□□□ -1.34
CCDC66-219ENST00000484441 PQLC1Q8N2U9 271 aa6.68□□□□□ -1.34
CCDC66-219ENST00000484441 JADE3Q92613 823 aa6.68□□□□□ -1.34
CCDC66-219ENST00000484441 TFAP2CQ92754 450 aa6.68□□□□□ -1.34
CCDC66-219ENST00000484441 SLC2A13Q96QE2 648 aa6.68□□□□□ -1.34
CCDC66-219ENST00000484441 PCDH12Q9NPG4 1184 aa6.68□□□□□ -1.34
CCDC66-219ENST00000484441 ING1Q9UK53 422 aaPredicted RBP6.68□□□□□ -1.34
CCDC66-219ENST00000484441 FZD1Q9UP38 647 aa6.68□□□□□ -1.34
CCDC66-219ENST00000484441 COL4A3BPQ9Y5P4 624 aa6.68□□□□□ -1.34
CCDC66-219ENST00000484441 HS3ST4Q9Y661 456 aa6.68□□□□□ -1.34
CCDC66-219ENST00000484441 SCAF4O95104 1147 aaKnown RBP6.67□□□□□ -1.34
CCDC66-219ENST00000484441 ADH4P08319 380 aa6.67□□□□□ -1.34
CCDC66-219ENST00000484441 IL2RBP14784 551 aa6.67□□□□□ -1.34
CCDC66-219ENST00000484441 GSPT1P15170 499 aaKnown RBP6.67□□□□□ -1.34
CCDC66-219ENST00000484441 NOMO1Q15155 1222 aa6.67□□□□□ -1.34
CCDC66-219ENST00000484441 OTUD7BQ6GQQ9 843 aa6.67□□□□□ -1.34
CCDC66-219ENST00000484441 EFCAB12Q6NXP0 572 aa6.67□□□□□ -1.34
CCDC66-219ENST00000484441 Q6ZPA2 131 aa6.67□□□□□ -1.34
CCDC66-219ENST00000484441 LRRC55Q6ZSA7 311 aa6.67□□□□□ -1.34
CCDC66-219ENST00000484441 GDF7Q7Z4P5 450 aa6.67□□□□□ -1.34
CCDC66-219ENST00000484441 ZFP28Q8NHY6 868 aa6.67□□□□□ -1.34
CCDC66-219ENST00000484441 CPT1CQ8TCG5 803 aa6.67□□□□□ -1.34
CCDC66-219ENST00000484441 LARP4BQ92615 738 aaKnown RBP6.67□□□□□ -1.34
CCDC66-219ENST00000484441 HAS1Q92839 578 aa6.67□□□□□ -1.34
CCDC66-219ENST00000484441 CLIP3Q96DZ5 547 aa6.67□□□□□ -1.34
CCDC66-219ENST00000484441 CYFIP2Q96F07 1278 aa6.67□□□□□ -1.34
CCDC66-219ENST00000484441 FAXDC2Q96IV6 333 aa6.67□□□□□ -1.34
CCDC66-219ENST00000484441 SPON1Q9HCB6 807 aa6.67□□□□□ -1.34
CCDC66-219ENST00000484441 EIF2B4Q9UI10 523 aaKnown RBP6.67□□□□□ -1.34
CCDC66-219ENST00000484441 TUBD1Q9UJT1 453 aa6.67□□□□□ -1.34
CCDC66-219ENST00000484441 PNPLA7Q6ZV29 1317 aa6.67□□□□□ -1.34
CCDC66-219ENST00000484441 PCDHGA12O60330 932 aa6.66□□□□□ -1.34
CCDC66-219ENST00000484441 PPFIA4O75335 1185 aa6.66□□□□□ -1.34
CCDC66-219ENST00000484441 MT-CO1P00395 513 aa6.66□□□□□ -1.34
CCDC66-219ENST00000484441 ITGB1P05556 798 aa6.66□□□□□ -1.34
CCDC66-219ENST00000484441 ATP8B2P98198 1209 aa6.66□□□□□ -1.34
CCDC66-219ENST00000484441 NHLH2Q02577 135 aa6.66□□□□□ -1.34
CCDC66-219ENST00000484441 FAM102AQ5T9C2 384 aaPredicted RBP6.66□□□□□ -1.34
CCDC66-219ENST00000484441 AFMIDQ63HM1 303 aa6.66□□□□□ -1.34
CCDC66-219ENST00000484441 RNF169Q8NCN4 708 aa6.66□□□□□ -1.34
CCDC66-219ENST00000484441 UHRF1Q96T88 793 aaPredicted RBP6.66□□□□□ -1.34
CCDC66-219ENST00000484441 NEU1Q99519 415 aa6.66□□□□□ -1.34
CCDC66-219ENST00000484441 ZNF768Q9H5H4 540 aaKnown RBP6.66□□□□□ -1.34
CCDC66-219ENST00000484441 NRDE2Q9H7Z3 1164 aa6.66□□□□□ -1.34
CCDC66-219ENST00000484441 MKS1Q9NXB0 559 aa6.66□□□□□ -1.34
CCDC66-219ENST00000484441 MOCS1Q9NZB8 636 aa6.66□□□□□ -1.34
CCDC66-219ENST00000484441 DKK2Q9UBU2 259 aa6.66□□□□□ -1.34
CCDC66-219ENST00000484441 PCDHGA9Q9Y5G4 932 aaKnown RBP6.66□□□□□ -1.34
CCDC66-219ENST00000484441 PCDHGA8Q9Y5G5 932 aa6.66□□□□□ -1.34
CCDC66-219ENST00000484441 PCDHGA7Q9Y5G6 932 aa6.66□□□□□ -1.34
CCDC66-219ENST00000484441 PCDHGA6Q9Y5G7 932 aa6.66□□□□□ -1.34
CCDC66-219ENST00000484441 PCDHGA3Q9Y5H0 932 aa6.66□□□□□ -1.34
CCDC66-219ENST00000484441 SHTN1A0MZ66 631 aa6.65□□□□□ -1.34
CCDC66-219ENST00000484441 GAGE12BA1L429 117 aa6.65□□□□□ -1.34
CCDC66-219ENST00000484441 GAGE12HA6NDE8 117 aa6.65□□□□□ -1.34
CCDC66-219ENST00000484441 MARCH11A6NNE9 402 aa6.65□□□□□ -1.34
CCDC66-219ENST00000484441 NDUFS2O75306 463 aa6.65□□□□□ -1.34
CCDC66-219ENST00000484441 KATNA1O75449 491 aa6.65□□□□□ -1.34
CCDC66-219ENST00000484441 C5AR1P21730 350 aa6.65□□□□□ -1.34
CCDC66-219ENST00000484441 PCSK1P29120 753 aa6.65□□□□□ -1.34
CCDC66-219ENST00000484441 ALDH1A3P47895 512 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms