RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 CHRNA3P32297 505 aa19.64■□□□□ 0.73
VARS2-209ENST00000477288 SULT1E1P49888 294 aa19.64■□□□□ 0.73
VARS2-209ENST00000477288 EPHA10Q5JZY3 1008 aa19.64■□□□□ 0.73
VARS2-209ENST00000477288 TTC39CQ8N584 583 aa19.64■□□□□ 0.73
VARS2-209ENST00000477288 SRPK1Q96SB4 655 aaKnown RBP19.64■□□□□ 0.73
VARS2-209ENST00000477288 ZNF197O14709 1029 aa19.64■□□□□ 0.73
VARS2-209ENST00000477288 PJA2O43164 708 aa19.64■□□□□ 0.73
VARS2-209ENST00000477288 ARIH2O95376 493 aa19.64■□□□□ 0.73
VARS2-209ENST00000477288 ALDH1A1P00352 501 aa19.64■□□□□ 0.73
VARS2-209ENST00000477288 KRT14P02533 472 aa19.64■□□□□ 0.73
VARS2-209ENST00000477288 KRT4P19013 534 aa19.64■□□□□ 0.73
VARS2-209ENST00000477288 ARFIP2P53365 341 aa19.64■□□□□ 0.73
VARS2-209ENST00000477288 TRIM62Q9BVG3 475 aa19.64■□□□□ 0.73
VARS2-209ENST00000477288 PLEKHA5Q9HAU0 1116 aa19.64■□□□□ 0.73
VARS2-209ENST00000477288 ADRA2BP18089 450 aa19.63■□□□□ 0.73
VARS2-209ENST00000477288 ST8SIA6P61647 398 aa19.63■□□□□ 0.73
VARS2-209ENST00000477288 LRRC14Q15048 493 aa19.63■□□□□ 0.73
VARS2-209ENST00000477288 TAF1CQ15572 869 aaPredicted RBP19.63■□□□□ 0.73
VARS2-209ENST00000477288 DUOXA2Q1HG44 320 aa19.63■□□□□ 0.73
VARS2-209ENST00000477288 HMBSP08397 361 aa19.63■□□□□ 0.73
VARS2-209ENST00000477288 CDH6P55285 790 aa19.63■□□□□ 0.73
VARS2-209ENST00000477288 CAV1Q03135 178 aa19.63■□□□□ 0.73
VARS2-209ENST00000477288 ZNF513Q8N8E2 541 aaPredicted RBP19.63■□□□□ 0.73
VARS2-209ENST00000477288 TGS1Q96RS0 853 aaKnown RBP19.63■□□□□ 0.73
VARS2-209ENST00000477288 ZCWPW1Q9H0M4 648 aa19.63■□□□□ 0.73
VARS2-209ENST00000477288 KDM4CQ9H3R0 1056 aa19.63■□□□□ 0.73
VARS2-209ENST00000477288 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.63■□□□□ 0.73
VARS2-209ENST00000477288 NCAPD2Q15021 1401 aa19.63■□□□□ 0.73
VARS2-209ENST00000477288 MYBL1P10243 752 aa19.63■□□□□ 0.73
VARS2-209ENST00000477288 ARL4DP49703 201 aa19.63■□□□□ 0.73
VARS2-209ENST00000477288 GTF2H3Q13889 308 aa19.63■□□□□ 0.73
VARS2-209ENST00000477288 SYTL3Q4VX76 610 aa19.63■□□□□ 0.73
VARS2-209ENST00000477288 PVALEFA0A1B0GWK0 134 aa19.63■□□□□ 0.73
VARS2-209ENST00000477288 TDP2O95551 362 aa19.63■□□□□ 0.73
VARS2-209ENST00000477288 PRKCBP05771 671 aa19.63■□□□□ 0.73
VARS2-209ENST00000477288 WASHC5Q12768 1159 aa19.63■□□□□ 0.73
VARS2-209ENST00000477288 PID1Q7Z2X4 250 aa19.63■□□□□ 0.73
VARS2-209ENST00000477288 LDHDQ86WU2 507 aa19.63■□□□□ 0.73
VARS2-209ENST00000477288 TNIP3Q96KP6 325 aa19.63■□□□□ 0.73
VARS2-209ENST00000477288 APOL1O14791 398 aa19.63■□□□□ 0.73
VARS2-209ENST00000477288 SEC24DO94855 1032 aaPredicted RBP19.63■□□□□ 0.73
VARS2-209ENST00000477288 AP2B1P63010 937 aa19.63■□□□□ 0.73
VARS2-209ENST00000477288 FAM117BQ6P1L5 589 aa19.63■□□□□ 0.73
VARS2-209ENST00000477288 CALR3Q96L12 384 aaKnown RBP19.63■□□□□ 0.73
VARS2-209ENST00000477288 BARHL2Q9NY43 387 aa19.63■□□□□ 0.73
VARS2-209ENST00000477288 PCDHA10Q9Y5I2 948 aa19.63■□□□□ 0.73
VARS2-209ENST00000477288 STK36Q9NRP7 1315 aa19.62■□□□□ 0.73
VARS2-209ENST00000477288 TRIM49P0CI25 452 aa19.62■□□□□ 0.73
VARS2-209ENST00000477288 TRIM49CP0CI26 452 aa19.62■□□□□ 0.73
VARS2-209ENST00000477288 CHRNA5P30532 468 aa19.62■□□□□ 0.73
VARS2-209ENST00000477288 NR1H3Q13133 447 aa19.62■□□□□ 0.73
VARS2-209ENST00000477288 KYAT1Q16773 422 aa19.62■□□□□ 0.73
VARS2-209ENST00000477288 SYCP2LQ5T4T6 812 aa19.62■□□□□ 0.73
VARS2-209ENST00000477288 HPS4Q9NQG7 708 aa19.62■□□□□ 0.73
VARS2-209ENST00000477288 DOLKQ9UPQ8 538 aa19.62■□□□□ 0.73
VARS2-209ENST00000477288 TRAPPC3O43617 180 aa19.62■□□□□ 0.73
VARS2-209ENST00000477288 TYK2P29597 1187 aa19.62■□□□□ 0.73
VARS2-209ENST00000477288 COBLL1Q53SF7 1204 aa19.62■□□□□ 0.73
VARS2-209ENST00000477288 ADCK2Q7Z695 626 aa19.62■□□□□ 0.73
VARS2-209ENST00000477288 STX19Q8N4C7 294 aa19.62■□□□□ 0.73
VARS2-209ENST00000477288 PAWRQ96IZ0 340 aaKnown RBP19.62■□□□□ 0.73
VARS2-209ENST00000477288 MTIF3Q9H2K0 278 aaKnown RBP19.62■□□□□ 0.73
VARS2-209ENST00000477288 JPH1Q9HDC5 661 aaPredicted RBP19.62■□□□□ 0.73
VARS2-209ENST00000477288 ARHGAP10A1A4S6 786 aa19.62■□□□□ 0.73
VARS2-209ENST00000477288 ASAP2O43150 1006 aa19.62■□□□□ 0.73
VARS2-209ENST00000477288 PRR29P0C7W0 189 aa19.62■□□□□ 0.73
VARS2-209ENST00000477288 STAT5BP51692 787 aa19.62■□□□□ 0.73
VARS2-209ENST00000477288 TADA2BQ86TJ2 420 aa19.62■□□□□ 0.73
VARS2-209ENST00000477288 LY9Q9HBG7 655 aa19.62■□□□□ 0.73
VARS2-209ENST00000477288 CLTCL1P53675 1640 aa19.62■□□□□ 0.73
VARS2-209ENST00000477288 EMSYQ7Z589 1322 aa19.62■□□□□ 0.73
VARS2-209ENST00000477288 PP2D1A8MPX8 630 aa19.62■□□□□ 0.73
VARS2-209ENST00000477288 CUL3Q13618 768 aa19.62■□□□□ 0.73
VARS2-209ENST00000477288 DMC1Q14565 340 aa19.62■□□□□ 0.73
VARS2-209ENST00000477288 ARID5BQ14865 1188 aa19.62■□□□□ 0.73
VARS2-209ENST00000477288 AARS2Q5JTZ9 985 aaKnown RBP19.62■□□□□ 0.73
VARS2-209ENST00000477288 MFN1Q8IWA4 741 aa19.62■□□□□ 0.73
VARS2-209ENST00000477288 MICALL2Q8IY33 904 aa19.62■□□□□ 0.73
VARS2-209ENST00000477288 IRF1P10914 325 aa19.62■□□□□ 0.73
VARS2-209ENST00000477288 GGCXP38435 758 aa19.62■□□□□ 0.73
VARS2-209ENST00000477288 SELENONQ9NZV5 590 aa19.62■□□□□ 0.73
VARS2-209ENST00000477288 AURKCQ9UQB9 309 aa19.62■□□□□ 0.73
VARS2-209ENST00000477288 ZNF157P51786 506 aaPredicted RBP19.61■□□□□ 0.73
VARS2-209ENST00000477288 TPI1P60174 286 aa19.61■□□□□ 0.73
VARS2-209ENST00000477288 GPBP1L1Q9HC44 474 aaPredicted RBP19.61■□□□□ 0.73
VARS2-209ENST00000477288 LSM7Q9UK45 103 aaKnown RBP19.61■□□□□ 0.73
VARS2-209ENST00000477288 YWHABP31946 246 aaKnown RBP19.61■□□□□ 0.73
VARS2-209ENST00000477288 PKN3Q6P5Z2 889 aa19.61■□□□□ 0.73
VARS2-209ENST00000477288 ECT2Q9H8V3 914 aa19.61■□□□□ 0.73
VARS2-209ENST00000477288 ATP5HO75947 161 aa19.61■□□□□ 0.73
VARS2-209ENST00000477288 HDAC4P56524 1084 aa19.61■□□□□ 0.73
VARS2-209ENST00000477288 TOB2Q14106 344 aaPredicted RBP19.61■□□□□ 0.73
VARS2-209ENST00000477288 NFRKBQ6P4R8 1299 aa19.61■□□□□ 0.73
VARS2-209ENST00000477288 C1orf54Q8WWF1 131 aa19.61■□□□□ 0.73
VARS2-209ENST00000477288 UNC45AQ9H3U1 944 aa19.61■□□□□ 0.73
VARS2-209ENST00000477288 AXIN2Q9Y2T1 843 aa19.61■□□□□ 0.73
VARS2-209ENST00000477288 MEFVO15553 781 aaPredicted RBP19.61■□□□□ 0.73
VARS2-209ENST00000477288 AKR1B1P15121 316 aa19.61■□□□□ 0.73
VARS2-209ENST00000477288 ZFXP17010 805 aaPredicted RBP19.61■□□□□ 0.73
VARS2-209ENST00000477288 RHOT1Q8IXI2 618 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 2150.6 ms