RNA–Protein interactions for RNA: ENST00000316673.8

HNF4A-202, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,470 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-202ENST00000316673 NR3C1P04150 777 aa16.8■□□□□ 0.28
HNF4A-202ENST00000316673 LIG4P49917 911 aa16.8■□□□□ 0.28
HNF4A-202ENST00000316673 MARSP56192 900 aaKnown RBP16.8■□□□□ 0.28
HNF4A-202ENST00000316673 NR1I3Q14994 352 aa16.8■□□□□ 0.28
HNF4A-202ENST00000316673 ZC2HC1CQ53FD0 456 aaPredicted RBP16.8■□□□□ 0.28
HNF4A-202ENST00000316673 SPECC1LQ69YQ0 1117 aa16.8■□□□□ 0.28
HNF4A-202ENST00000316673 SLFN12LQ6IEE8 588 aa16.8■□□□□ 0.28
HNF4A-202ENST00000316673 FRMD5Q7Z6J6 570 aa16.8■□□□□ 0.28
HNF4A-202ENST00000316673 ZC3H3Q8IXZ2 948 aaKnown RBP16.8■□□□□ 0.28
HNF4A-202ENST00000316673 HACE1Q8IYU2 909 aa16.8■□□□□ 0.28
HNF4A-202ENST00000316673 CCDC150Q8NCX0 1101 aa16.8■□□□□ 0.28
HNF4A-202ENST00000316673 TMEM174Q8WUU8 243 aa16.8■□□□□ 0.28
HNF4A-202ENST00000316673 ACO2Q99798 780 aaKnown RBP16.8■□□□□ 0.28
HNF4A-202ENST00000316673 RTN4Q9NQC3 1192 aaKnown RBP16.8■□□□□ 0.28
HNF4A-202ENST00000316673 ENPP3O14638 875 aa16.8■□□□□ 0.28
HNF4A-202ENST00000316673 KIAA0391O15091 583 aaKnown RBP16.8■□□□□ 0.28
HNF4A-202ENST00000316673 B4GALT5O43286 388 aa16.8■□□□□ 0.28
HNF4A-202ENST00000316673 EPHB4P54760 987 aa16.8■□□□□ 0.28
HNF4A-202ENST00000316673 DCAF4L1Q3SXM0 396 aa16.8■□□□□ 0.28
HNF4A-202ENST00000316673 LRRC55Q6ZSA7 311 aa16.8■□□□□ 0.28
HNF4A-202ENST00000316673 OTOP2Q7RTS6 562 aa16.8■□□□□ 0.28
HNF4A-202ENST00000316673 TMC6Q7Z403 805 aa16.8■□□□□ 0.28
HNF4A-202ENST00000316673 USP37Q86T82 979 aa16.8■□□□□ 0.28
HNF4A-202ENST00000316673 SLC9A9Q8IVB4 645 aa16.8■□□□□ 0.28
HNF4A-202ENST00000316673 VSTM4Q8IW00 320 aa16.8■□□□□ 0.28
HNF4A-202ENST00000316673 C12orf56Q8IXR9 622 aa16.8■□□□□ 0.28
HNF4A-202ENST00000316673 GLIS3Q8NEA6 775 aa16.8■□□□□ 0.28
HNF4A-202ENST00000316673 RSPH1Q8WYR4 309 aa16.8■□□□□ 0.28
HNF4A-202ENST00000316673 FGFBP2Q9BYJ0 223 aa16.8■□□□□ 0.28
HNF4A-202ENST00000316673 TRIM6Q9C030 488 aaPredicted RBP16.8■□□□□ 0.28
HNF4A-202ENST00000316673 MICAL3Q7RTP6 2002 aa16.79■□□□□ 0.28
HNF4A-202ENST00000316673 A0A0U1RQF3 1178 aa16.79■□□□□ 0.28
HNF4A-202ENST00000316673 A0A1W2PQC6 194 aa16.79■□□□□ 0.28
HNF4A-202ENST00000316673 ZBBXA8MT70 800 aa16.79■□□□□ 0.28
HNF4A-202ENST00000316673 LGALS16A8MUM7 142 aa16.79■□□□□ 0.28
HNF4A-202ENST00000316673 CLDN3O15551 220 aa16.79■□□□□ 0.28
HNF4A-202ENST00000316673 ZNF623O75123 536 aa16.79■□□□□ 0.28
HNF4A-202ENST00000316673 EOMESO95936 686 aa16.79■□□□□ 0.28
HNF4A-202ENST00000316673 STAG3L1P0CL83 205 aa16.79■□□□□ 0.28
HNF4A-202ENST00000316673 PSMC2P35998 433 aaKnown RBP16.79■□□□□ 0.28
HNF4A-202ENST00000316673 UBXN1Q04323 297 aa16.79■□□□□ 0.28
HNF4A-202ENST00000316673 KYAT1Q16773 422 aa16.79■□□□□ 0.28
HNF4A-202ENST00000316673 MPZL3Q6UWV2 235 aa16.79■□□□□ 0.28
HNF4A-202ENST00000316673 PPFIBP1Q86W92 1011 aa16.79■□□□□ 0.28
HNF4A-202ENST00000316673 PHOSPHO2Q8TCD6 241 aa16.79■□□□□ 0.28
HNF4A-202ENST00000316673 NAP1L5Q96NT1 182 aaPredicted RBP16.79■□□□□ 0.28
HNF4A-202ENST00000316673 TCHPQ9BT92 498 aa16.79■□□□□ 0.28
HNF4A-202ENST00000316673 TARS2Q9BW92 718 aaKnown RBP16.79■□□□□ 0.28
HNF4A-202ENST00000316673 VPS16Q9H269 839 aa16.79■□□□□ 0.28
HNF4A-202ENST00000316673 PDZD7Q9H5P4 517 aa16.79■□□□□ 0.28
HNF4A-202ENST00000316673 ELAC1Q9H777 363 aaKnown RBP16.79■□□□□ 0.28
HNF4A-202ENST00000316673 TAB2Q9NYJ8 693 aa16.79■□□□□ 0.28
HNF4A-202ENST00000316673 ARMCX3Q9UH62 379 aaPredicted RBP16.79■□□□□ 0.28
HNF4A-202ENST00000316673 ITIH6Q6UXX5 1313 aa16.79■□□□□ 0.28
HNF4A-202ENST00000316673 C9IYK1 514 aa16.78■□□□□ 0.28
HNF4A-202ENST00000316673 MGEA5O60502 916 aa16.78■□□□□ 0.28
HNF4A-202ENST00000316673 MCF2P10911 925 aa16.78■□□□□ 0.28
HNF4A-202ENST00000316673 PROZP22891 400 aa16.78■□□□□ 0.28
HNF4A-202ENST00000316673 WDR5P61964 334 aaKnown RBP16.78■□□□□ 0.28
HNF4A-202ENST00000316673 FAM189BP81408 668 aa16.78■□□□□ 0.28
HNF4A-202ENST00000316673 IRF2BP1Q8IU81 584 aa16.78■□□□□ 0.28
HNF4A-202ENST00000316673 PGBD4Q96DM1 585 aa16.78■□□□□ 0.28
HNF4A-202ENST00000316673 CPB2Q96IY4 423 aa16.78■□□□□ 0.28
HNF4A-202ENST00000316673 RNPC3Q96LT9 517 aaKnown RBP16.78■□□□□ 0.28
HNF4A-202ENST00000316673 SLC9A7Q96T83 725 aa16.78■□□□□ 0.28
HNF4A-202ENST00000316673 NUP58Q9BVL2 599 aa16.78■□□□□ 0.28
HNF4A-202ENST00000316673 PTPRHQ9HD43 1115 aa16.78■□□□□ 0.28
HNF4A-202ENST00000316673 AGPAT3Q9NRZ7 376 aa16.78■□□□□ 0.28
HNF4A-202ENST00000316673 FAM105AQ9NUU6 356 aa16.78■□□□□ 0.28
HNF4A-202ENST00000316673 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.78■□□□□ 0.28
HNF4A-202ENST00000316673 SLC4A7Q9Y6M7 1214 aa16.78■□□□□ 0.28
HNF4A-202ENST00000316673 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.77■□□□□ 0.28
HNF4A-202ENST00000316673 MAPK13O15264 365 aa16.77■□□□□ 0.28
HNF4A-202ENST00000316673 HOXA2O43364 376 aa16.77■□□□□ 0.28
HNF4A-202ENST00000316673 NOLC1Q14978 699 aaKnown RBP eCLIP16.77■□□□□ 0.282e-6■■■■■ 30.6
HNF4A-202ENST00000316673 ZNF568Q3ZCX4 644 aa16.77■□□□□ 0.28
HNF4A-202ENST00000316673 VWA3BQ502W6 1294 aa16.77■□□□□ 0.28
HNF4A-202ENST00000316673 RASIP1Q5U651 963 aa16.77■□□□□ 0.28
HNF4A-202ENST00000316673 CEP135Q66GS9 1140 aa16.77■□□□□ 0.28
HNF4A-202ENST00000316673 ARMCX5Q6P1M9 558 aa16.77■□□□□ 0.28
HNF4A-202ENST00000316673 RTN4RL1Q86UN2 441 aaPredicted RBP16.77■□□□□ 0.28
HNF4A-202ENST00000316673 NPAS4Q8IUM7 802 aa16.77■□□□□ 0.28
HNF4A-202ENST00000316673 KIAA1586Q9HCI6 787 aa16.77■□□□□ 0.28
HNF4A-202ENST00000316673 UBN1Q9NPG3 1134 aa16.77■□□□□ 0.28
HNF4A-202ENST00000316673 TMEM161AQ9NX61 479 aa16.77■□□□□ 0.28
HNF4A-202ENST00000316673 PCDHB2Q9Y5E7 798 aa16.77■□□□□ 0.28
HNF4A-202ENST00000316673 STYXL1Q9Y6J8 313 aa16.77■□□□□ 0.28
HNF4A-202ENST00000316673 TTC3P53804 2025 aa16.77■□□□□ 0.27
HNF4A-202ENST00000316673 A0A1W2PPC1 479 aa16.76■□□□□ 0.27
HNF4A-202ENST00000316673 TGFB1I1O43294 461 aa16.76■□□□□ 0.27
HNF4A-202ENST00000316673 EXOC3O60645 756 aa16.76■□□□□ 0.27
HNF4A-202ENST00000316673 KRT13P13646 458 aa16.76■□□□□ 0.27
HNF4A-202ENST00000316673 GARTP22102 1010 aa16.76■□□□□ 0.27
HNF4A-202ENST00000316673 HOXD13P35453 343 aa16.76■□□□□ 0.27
HNF4A-202ENST00000316673 MATR3P43243 847 aaKnown RBP eCLIP16.76■□□□□ 0.27
HNF4A-202ENST00000316673 MCL1Q07820 350 aa16.76■□□□□ 0.27
HNF4A-202ENST00000316673 TCTN1Q2MV58 587 aa16.76■□□□□ 0.27
HNF4A-202ENST00000316673 APTXQ7Z2E3 356 aaKnown RBP16.76■□□□□ 0.27
HNF4A-202ENST00000316673 LINC01599Q8WXQ3 324 aa16.76■□□□□ 0.27
HNF4A-202ENST00000316673 TOP1MTQ969P6 601 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms