RNA–Protein interactions for RNA: ENSMUST00000097822.9

Ubr4-201, Transcript of E3 ubiquitin-protein ligase UBR4, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ubr4, Length 15,928 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4-201ENSMUST00000097822 Acot3Q9QYR7 432 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Nat3P50296 290 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Arid5aQ3U108 590 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Fam183bQ5NC57 135 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Ccdc85bQ6PDY0 202 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Tbc1d10bQ8BHL3 798 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Rnf112Q96DY5 654 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Eid1Q9DCR4 169 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Maged2Q9ER67 616 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Gm29554A0A087WNW4 188 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 PolgP54099 1218 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Sesn2P58043 480 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Sema3eP70275 775 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Plk4Q64702 925 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Ddx56Q9D0R4 546 aaKnown RBP6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Capn10Q9ESK3 666 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 PlekQ9JHK5 350 aaKnown RBP6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Krt10P02535 570 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Pon1P52430 355 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Rrp36Q3UFY0 244 aaKnown RBP6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Ccna1Q61456 421 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Ces3aQ63880 571 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 PygbQ8CI94 843 aaKnown RBP6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Ces3bQ8VCU1 571 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Syde2E9PUP1 1314 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Prl2c3P04768 224 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Herc3A6H6S0 1050 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Foxd1Q61345 456 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Tmtc4Q8BG19 741 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Tubgcp5Q8BKN5 1024 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Spata1Q9D5R4 444 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Olfr552E9Q545 317 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Prim2P33610 505 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 YwhahP68510 246 aaKnown RBP6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Rpa3Q9CQ71 121 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Borcs5Q9D920 195 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Nup160Q9Z0W3 1402 aaKnown RBP6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Anxa8O35640 327 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Per2O54943 1257 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Asna1O54984 348 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Crybg3Q80W49 1005 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Fam118bQ8C569 351 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Sde2Q8K1J5 448 aaKnown RBP6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Sntg2Q925E0 539 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Foxo3Q9WVH4 672 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Abcc12Q80WJ6 1366 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Ptprn2P80560 1001 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Wdr41Q3UDP0 460 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Gja3Q64448 417 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Trim9Q8C7M3 817 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 CerkQ8K4Q7 531 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Trim31Q8R0K2 507 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Usp29Q9ES63 869 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Rhbdl2A2AGA4 302 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Gm3187M0QWW3 260 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Adam15O88839 864 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 ErfP70459 551 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Irf6P97431 467 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 GnpatP98192 678 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Syce1lQ5D525 247 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Mettl25Q6NXH8 597 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Nlrp4bQ8C6J9 863 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Lsm14aQ8K2F8 462 aaKnown RBP6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Rpap2Q8VC34 614 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Pcsk1nQ9QXV0 258 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Trim67Q505D9 768 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Stk32aQ8BGW6 398 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Rmdn2Q8BSE0 410 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 IrgcQ8C262 412 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Phf11A6H5X4 337 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Eya3P97480 510 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Cnot7Q60809 285 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Runx1t1Q61909 577 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Polr2bQ8CFI7 1174 aaKnown RBP6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Sf3b3Q921M3 1217 aaKnown RBP6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 CinpQ9D0V8 212 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Adgrl2Q8JZZ7 1487 aa6.33□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Sema4dO09126 861 aa6.32□□□□□ -1.4
Ubr4-201ENSMUST00000097822 C1qbpO35658 278 aa6.32□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Men1O88559 611 aaKnown RBP6.32□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Nutm2Q3V0C3 733 aa6.32□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Kctd19Q562E2 927 aa6.32□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Caprin1Q60865 707 aaKnown RBP6.32□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Zhx2Q8C0C0 836 aaKnown RBP6.32□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Vmn1r213Q8R278 384 aa6.32□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Ist1Q9CX00 362 aa6.32□□□□□ -1.4
Ubr4-201ENSMUST00000097822 PodxlQ9R0M4 503 aa6.32□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Rad51ap2G3UW63 976 aa6.32□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Rasa3Q60790 834 aa6.32□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Shc3Q61120 474 aa6.32□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Rundc3bQ6PDC0 408 aa6.32□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Rsbn1Q80T69 795 aa6.32□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Ttc7aQ8BGB2 858 aa6.32□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Sh3kbp1Q8R550 709 aaKnown RBP6.32□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Farp2Q91VS8 1065 aa6.32□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Pdia2D3Z6P0 527 aa6.32□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Ifnb1P01575 182 aa6.32□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Tmc5Q32NZ6 967 aa6.32□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Tigd4Q8BUZ3 513 aa6.32□□□□□ -1.4
Ubr4-201ENSMUST00000097822 Wdr47Q8CGF6 920 aa6.32□□□□□ -1.4
Retrieved 100 of 22,080 RNA–protein pairs in 26.2 ms