Protein–RNA interactions for Protein: O09126

Sema4d, Semaphorin-4D, mousemouse

Predictions only

Length 861 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema4dO09126 Gm25239-201ENSMUST00000174915 86 ntBASIC40.14■■■■■ 4.02
Sema4dO09126 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37.17■■■■□ 3.54
Sema4dO09126 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.96■■■■□ 3.51
Sema4dO09126 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.45■■■■□ 3.43
Sema4dO09126 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.1■■■■□ 3.37
Sema4dO09126 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.85■■■■□ 3.33
Sema4dO09126 Gm15042-201ENSMUST00000120212 883 ntBASIC35.35■■■■□ 3.25
Sema4dO09126 Gm15045-201ENSMUST00000117359 883 ntBASIC34.68■■■■□ 3.14
Sema4dO09126 Gm24109-201ENSMUST00000175489 103 ntBASIC34.68■■■■□ 3.14
Sema4dO09126 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
Sema4dO09126 Psd-208ENSMUST00000224556 2034 ntBASIC34.53■■■■□ 3.12
Sema4dO09126 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
Sema4dO09126 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.94■■■■□ 3.02
Sema4dO09126 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.87■■■■□ 3.01
Sema4dO09126 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.85■■■■□ 3.01
Sema4dO09126 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
Sema4dO09126 Gm23366-201ENSMUST00000175022 89 ntBASIC33.51■■■□□ 2.95
Sema4dO09126 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.44■■■□□ 2.94
Sema4dO09126 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
Sema4dO09126 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.23■■■□□ 2.91
Sema4dO09126 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Sema4dO09126 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
Sema4dO09126 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.9
Sema4dO09126 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.19■■■□□ 2.9
Sema4dO09126 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.19■■■□□ 2.9
Sema4dO09126 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
Sema4dO09126 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Sema4dO09126 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.07■■■□□ 2.89
Sema4dO09126 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Sema4dO09126 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.94■■■□□ 2.86
Sema4dO09126 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Sema4dO09126 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Sema4dO09126 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.58■■■□□ 2.81
Sema4dO09126 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.57■■■□□ 2.8
Sema4dO09126 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
Sema4dO09126 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Sema4dO09126 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.49■■■□□ 2.79
Sema4dO09126 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Sema4dO09126 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.24■■■□□ 2.75
Sema4dO09126 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Sema4dO09126 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32.09■■■□□ 2.73
Sema4dO09126 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.09■■■□□ 2.73
Sema4dO09126 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.94■■■□□ 2.7
Sema4dO09126 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Sema4dO09126 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.76■■■□□ 2.68
Sema4dO09126 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.74■■■□□ 2.67
Sema4dO09126 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Sema4dO09126 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Sema4dO09126 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
Sema4dO09126 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Sema4dO09126 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.65■■■□□ 2.66
Sema4dO09126 Gm25238-201ENSMUST00000174914 89 ntBASIC31.63■■■□□ 2.65
Sema4dO09126 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Sema4dO09126 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Sema4dO09126 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.54■■■□□ 2.64
Sema4dO09126 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.45■■■□□ 2.63
Sema4dO09126 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Sema4dO09126 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Sema4dO09126 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Sema4dO09126 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Sema4dO09126 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Sema4dO09126 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Sema4dO09126 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.56
Sema4dO09126 Gm27325-201ENSMUST00000175467 74 ntBASIC31.06■■■□□ 2.56
Sema4dO09126 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Sema4dO09126 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.06■■■□□ 2.56
Sema4dO09126 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31■■■□□ 2.55
Sema4dO09126 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.98■■■□□ 2.55
Sema4dO09126 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.98■■■□□ 2.55
Sema4dO09126 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.97■■■□□ 2.55
Sema4dO09126 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.94■■■□□ 2.54
Sema4dO09126 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.94■■■□□ 2.54
Sema4dO09126 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.92■■■□□ 2.54
Sema4dO09126 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Sema4dO09126 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.9■■■□□ 2.54
Sema4dO09126 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.9■■■□□ 2.54
Sema4dO09126 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Sema4dO09126 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Sema4dO09126 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Sema4dO09126 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.61■■■□□ 2.49
Sema4dO09126 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Sema4dO09126 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Sema4dO09126 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.57■■■□□ 2.48
Sema4dO09126 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
Sema4dO09126 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.42■■■□□ 2.46
Sema4dO09126 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Sema4dO09126 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Sema4dO09126 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
Sema4dO09126 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Sema4dO09126 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Sema4dO09126 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.3■■■□□ 2.44
Sema4dO09126 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Sema4dO09126 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Sema4dO09126 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Sema4dO09126 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
Sema4dO09126 Rab21-202ENSMUST00000218831 843 ntBASIC30.25■■■□□ 2.43
Sema4dO09126 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Sema4dO09126 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Sema4dO09126 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Sema4dO09126 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms