RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Zfp839E9PUU5 921 aa16.67■□□□□ 0.26
Clcn3-203ENSMUST00000093490 MycP01108 439 aa16.67■□□□□ 0.26
Clcn3-203ENSMUST00000093490 RarbP22605 482 aa16.67■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Krt80Q0VBK2 452 aa16.67■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Rpusd2Q149F1 553 aa16.67■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Patl1Q3TC46 770 aaKnown RBP16.67■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Rnf180Q3U827 592 aa16.67■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Ttbk2Q3UVR3 1243 aa16.67■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Olfr832Q7TRG9 312 aa16.67■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Trpm8Q8R4D5 1104 aa16.67■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Slc5a5Q99PN0 618 aa16.67■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Pgm1Q9D0F9 562 aa16.67■□□□□ 0.26
Clcn3-203ENSMUST00000093490 PigoQ9JJI6 1093 aa16.67■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Adam22Q9R1V6 904 aa16.67■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Rgs22G3UYX5 1258 aa16.67■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Cep95Q8BVV7 827 aa16.67■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Ptrh1Q8BW00 204 aa16.67■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Atxn7Q8R4I1 867 aa16.67■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Frmd4bQ920B0 1035 aa16.67■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Prmt7Q922X9 692 aa16.67■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Mrps9Q9D7N3 390 aaKnown RBP16.67■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Ccdc62E9PVD1 701 aa16.67■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Nudt16Q6P3D0 195 aa16.67■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Sh3tc2Q80VA5 1289 aa16.67■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Ipo11Q8K2V6 975 aa16.67■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Eif3hQ91WK2 352 aaKnown RBP16.67■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Iqcf1Q9D9K8 182 aa16.67■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Abca17E9PX95 1733 aa16.67■□□□□ 0.26
Clcn3-203ENSMUST00000093490 LmnaP48678 665 aaKnown RBP16.67■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Lsg1Q3UM18 644 aaKnown RBP16.67■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Calhm6Q8C9E8 313 aa16.67■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Def8Q99J78 448 aa16.67■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Apobec2Q9WV35 224 aa16.67■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Nrxn3Q6P9K9 1571 aa16.67■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Vps4bP46467 444 aaKnown RBP16.66■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Kdm7aQ3UWM4 940 aa16.66■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Znf148Q61624 794 aa16.66■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Ptk6Q64434 451 aa16.66■□□□□ 0.26
Clcn3-203ENSMUST00000093490 ParvaQ9EPC1 372 aa16.66■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Gm1758F6VZZ1 202 aa16.66■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Ctdnep1Q3TP92 244 aa16.66■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Oog4Q4G0C7 502 aa16.66■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Dclk2Q6PGN3 756 aa16.66■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Rhobtb1Q9DAK3 695 aa16.66■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Ngly1Q9JI78 651 aa16.66■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Zbtb18Q9WUK6 522 aa16.66■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Celf2Q9Z0H4 508 aaKnown RBP16.66■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Mrpl40Q9Z2Q5 206 aa16.66■□□□□ 0.26
Clcn3-203ENSMUST00000093490 1700016G14RikA0A286YCZ6 238 aa16.66■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Nrg3O35181 713 aa16.66■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Prl3b1P09586 222 aa16.66■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Bace1P56818 501 aa16.66■□□□□ 0.26
Clcn3-203ENSMUST00000093490 4933427I04RikQ3V053 235 aa16.66■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Gm13103Q4VAD2 491 aa16.66■□□□□ 0.26
Clcn3-203ENSMUST00000093490 TxlngQ8BHN1 524 aa16.66■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Stx19Q8R1Q0 292 aa16.66■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Pcdha11Q91Y19 950 aa16.66■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Fuca2Q99KR8 461 aa16.66■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Serpina16D3Z660 418 aa16.66■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Gm2237E9Q501 211 aa16.66■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Oog1E9Q5G7 496 aa16.66■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Gm3591K7N6X2 186 aa16.66■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Ezh2Q61188 746 aaKnown RBP16.66■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Cyfip1Q7TMB8 1253 aa16.66■□□□□ 0.26
Clcn3-203ENSMUST00000093490 PolrmtQ8BKF1 1207 aaKnown RBP16.66■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Fam84aQ9D650 292 aa16.66■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Ripor3A1L3T7 938 aa16.65■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Gbp4A4UUI3 631 aa16.65■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Rabgap1lA6H6A9 815 aa16.65■□□□□ 0.26
Clcn3-203ENSMUST00000093490 AgtP11859 477 aa16.65■□□□□ 0.26
Clcn3-203ENSMUST00000093490 SftpbP50405 377 aa16.65■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Ero1bQ8R2E9 467 aa16.65■□□□□ 0.26
Clcn3-203ENSMUST00000093490 HnmtQ91VF2 295 aa16.65■□□□□ 0.26
Clcn3-203ENSMUST00000093490 GgcxQ9QYC7 757 aa16.65■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Pdha1P35486 390 aaKnown RBP16.65■□□□□ 0.26
Clcn3-203ENSMUST00000093490 SybuQ8BHS8 665 aa16.65■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Nemp2Q8CB65 421 aa16.65■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Tgif2lx2Q8K5B9 231 aa16.65■□□□□ 0.26
Clcn3-203ENSMUST00000093490 HibchQ8QZS1 385 aa16.65■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Thoc1Q8R3N6 657 aaKnown RBP16.65■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Fgd4Q91ZT5 766 aa16.65■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Mrps5Q99N87 432 aaKnown RBP16.65■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Rhobtb3Q9CTN4 611 aa16.65■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Trp53inp1Q9QXE4 239 aa16.65■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Pcdh11xF6ZNL5 1338 aa16.65■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Gm382B1AXN3 1250 aa16.65■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Slc16a1P53986 493 aa16.65■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Entpd7Q3TCT4 606 aa16.65■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Olfr119Q7TRJ5 321 aa16.65■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Rps6kc1Q8BLK9 1056 aa16.65■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Uap1Q91YN5 522 aa16.65■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Atp2c2A7L9Z8 944 aa16.65■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Eif3dO70194 548 aaKnown RBP16.65■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Nedd4P46935 887 aaKnown RBP16.65■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Rufy4Q3TYX8 563 aa16.65■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Capn13Q3UW68 665 aa16.65■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Creb3Q61817 404 aa16.65■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Wdr35Q8BND3 1181 aa16.65■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Dnajc5gQ8C632 165 aa16.65■□□□□ 0.26
Clcn3-203ENSMUST00000093490 Q9CYI0 393 aa16.65■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 37.6 ms