Protein–RNA interactions for Protein: Q7TMB8

Cyfip1, Cytoplasmic FMR1-interacting protein 1, mousemouse

Predictions only

Length 1,253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cyfip1Q7TMB8 Gm25239-201ENSMUST00000174915 86 ntBASIC42.98■■■■■ 4.47
Cyfip1Q7TMB8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC39.73■■■■□ 3.95
Cyfip1Q7TMB8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC39.18■■■■□ 3.86
Cyfip1Q7TMB8 Gm15042-201ENSMUST00000120212 883 ntBASIC37.58■■■■□ 3.61
Cyfip1Q7TMB8 Gm24109-201ENSMUST00000175489 103 ntBASIC37.22■■■■□ 3.55
Cyfip1Q7TMB8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37.15■■■■□ 3.54
Cyfip1Q7TMB8 Gm15045-201ENSMUST00000117359 883 ntBASIC36.77■■■■□ 3.48
Cyfip1Q7TMB8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.48■■■■□ 3.43
Cyfip1Q7TMB8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC36.46■■■■□ 3.43
Cyfip1Q7TMB8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36.27■■■■□ 3.4
Cyfip1Q7TMB8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC36.04■■■■□ 3.36
Cyfip1Q7TMB8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.94■■■■□ 3.34
Cyfip1Q7TMB8 Gm23366-201ENSMUST00000175022 89 ntBASIC35.88■■■■□ 3.33
Cyfip1Q7TMB8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.31
Cyfip1Q7TMB8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
Cyfip1Q7TMB8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
Cyfip1Q7TMB8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.89■■■■□ 3.18
Cyfip1Q7TMB8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.77■■■■□ 3.16
Cyfip1Q7TMB8 AC153911.1-202ENSMUST00000218534 1034 ntBASIC34.71■■■■□ 3.15
Cyfip1Q7TMB8 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC34.71■■■■□ 3.15
Cyfip1Q7TMB8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
Cyfip1Q7TMB8 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC34.5■■■■□ 3.11
Cyfip1Q7TMB8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC34.38■■■■□ 3.09
Cyfip1Q7TMB8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC34.35■■■■□ 3.09
Cyfip1Q7TMB8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
Cyfip1Q7TMB8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
Cyfip1Q7TMB8 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC34.31■■■■□ 3.08
Cyfip1Q7TMB8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC34.25■■■■□ 3.07
Cyfip1Q7TMB8 Psd-208ENSMUST00000224556 2034 ntBASIC34.19■■■■□ 3.06
Cyfip1Q7TMB8 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
Cyfip1Q7TMB8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC34.12■■■■□ 3.05
Cyfip1Q7TMB8 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
Cyfip1Q7TMB8 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC34.02■■■■□ 3.04
Cyfip1Q7TMB8 Gm25238-201ENSMUST00000174914 89 ntBASIC33.93■■■■□ 3.02
Cyfip1Q7TMB8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.92■■■■□ 3.02
Cyfip1Q7TMB8 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC33.87■■■■□ 3.01
Cyfip1Q7TMB8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
Cyfip1Q7TMB8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33.52■■■□□ 2.96
Cyfip1Q7TMB8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
Cyfip1Q7TMB8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC33.27■■■□□ 2.92
Cyfip1Q7TMB8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
Cyfip1Q7TMB8 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC33.22■■■□□ 2.91
Cyfip1Q7TMB8 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Cyfip1Q7TMB8 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC33.1■■■□□ 2.89
Cyfip1Q7TMB8 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
Cyfip1Q7TMB8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
Cyfip1Q7TMB8 Gm27325-201ENSMUST00000175467 74 ntBASIC32.95■■■□□ 2.87
Cyfip1Q7TMB8 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Cyfip1Q7TMB8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.88■■■□□ 2.85
Cyfip1Q7TMB8 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC32.84■■■□□ 2.85
Cyfip1Q7TMB8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.78■■■□□ 2.84
Cyfip1Q7TMB8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC32.77■■■□□ 2.84
Cyfip1Q7TMB8 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC32.7■■■□□ 2.83
Cyfip1Q7TMB8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.69■■■□□ 2.82
Cyfip1Q7TMB8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Cyfip1Q7TMB8 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32.54■■■□□ 2.8
Cyfip1Q7TMB8 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Cyfip1Q7TMB8 Gm25262-201ENSMUST00000174934 133 ntBASIC32.46■■■□□ 2.79
Cyfip1Q7TMB8 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Cyfip1Q7TMB8 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Cyfip1Q7TMB8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
Cyfip1Q7TMB8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Cyfip1Q7TMB8 Rab21-202ENSMUST00000218831 843 ntBASIC32.32■■■□□ 2.76
Cyfip1Q7TMB8 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Cyfip1Q7TMB8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC32.26■■■□□ 2.75
Cyfip1Q7TMB8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32.22■■■□□ 2.75
Cyfip1Q7TMB8 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Cyfip1Q7TMB8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
Cyfip1Q7TMB8 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Cyfip1Q7TMB8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32.06■■■□□ 2.72
Cyfip1Q7TMB8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
Cyfip1Q7TMB8 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32.02■■■□□ 2.72
Cyfip1Q7TMB8 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.99■■■□□ 2.71
Cyfip1Q7TMB8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Cyfip1Q7TMB8 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
Cyfip1Q7TMB8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31.97■■■□□ 2.71
Cyfip1Q7TMB8 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Cyfip1Q7TMB8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Cyfip1Q7TMB8 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Cyfip1Q7TMB8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.91■■■□□ 2.7
Cyfip1Q7TMB8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31.91■■■□□ 2.7
Cyfip1Q7TMB8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.9■■■□□ 2.7
Cyfip1Q7TMB8 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
Cyfip1Q7TMB8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
Cyfip1Q7TMB8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31.84■■■□□ 2.69
Cyfip1Q7TMB8 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31.81■■■□□ 2.68
Cyfip1Q7TMB8 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
Cyfip1Q7TMB8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.72■■■□□ 2.67
Cyfip1Q7TMB8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
Cyfip1Q7TMB8 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.67■■■□□ 2.66
Cyfip1Q7TMB8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
Cyfip1Q7TMB8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.63■■■□□ 2.65
Cyfip1Q7TMB8 Gm26115-201ENSMUST00000175605 87 ntBASIC31.62■■■□□ 2.65
Cyfip1Q7TMB8 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Cyfip1Q7TMB8 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Cyfip1Q7TMB8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.54■■■□□ 2.64
Cyfip1Q7TMB8 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Cyfip1Q7TMB8 Gm8109-201ENSMUST00000194076 746 ntBASIC31.48■■■□□ 2.63
Cyfip1Q7TMB8 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Cyfip1Q7TMB8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31.46■■■□□ 2.63
Retrieved 100 of 76,532 protein–RNA pairs in 113.2 ms