RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Fthl17aQ9DAX0 182 aa11.33□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Tbk1Q9WUN2 729 aa11.33□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Sipa1l3G3X9J0 1776 aa11.33□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Mocs3A2BDX3 460 aaKnown RBP11.33□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Galnt4O08832 578 aa11.33□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Arl1P61211 181 aa11.33□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Zfp454Q80Y34 536 aa11.33□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Clic5Q8BXK9 251 aa11.33□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Rfx6Q8C7R7 927 aa11.33□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Rhobtb3Q9CTN4 611 aa11.33□□□□□ -0.6
Rnf40-201ENSMUST00000033088 BlvraQ9CY64 295 aa11.33□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Lgr5Q9Z1P4 907 aa11.33□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Mroh8E9PYI4 1049 aa11.32□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Pcdha4O88689 947 aa11.32□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Krt13P08730 437 aa11.32□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Pdcd2P46718 343 aa11.32□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Psmc6P62334 389 aa11.32□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Gm5592Q3V0A6 857 aa11.32□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Snx25Q3ZT31 840 aa11.32□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Odr4Q4PJX1 447 aa11.32□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Ppp2r5eQ61151 467 aa11.32□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Fbxo11Q7TPD1 930 aaKnown RBP11.32□□□□□ -0.6
Rnf40-201ENSMUST00000033088 GanQ8CA72 597 aa11.32□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Ttc33Q9D6K7 262 aa11.32□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Mad2l2Q9D752 211 aa11.32□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Trpc3Q9QZC1 836 aa11.32□□□□□ -0.6
Rnf40-201ENSMUST00000033088 CaluO35887 315 aa11.32□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Oprl1P35377 367 aa11.32□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Mybl2P48972 704 aa11.32□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Kcnn2P58390 839 aa11.32□□□□□ -0.6
Rnf40-201ENSMUST00000033088 PhexP70669 749 aa11.32□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Lrrc55Q3UY51 311 aa11.32□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Prpf31Q8CCF0 499 aaKnown RBP11.32□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Pglyrp2Q8VCS0 530 aa11.32□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Tnpo2Q99LG2 887 aaKnown RBP11.32□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Zcrb1Q9CZ96 217 aaKnown RBP11.32□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Hebp1Q9R257 190 aa11.32□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Vmn2r68L7N2B3 851 aa11.32□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Hspa9P38647 679 aaKnown RBP11.32□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Atp6v1b2P62814 511 aa11.32□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Mark3Q03141 753 aa11.32□□□□□ -0.6
Rnf40-201ENSMUST00000033088 PcQ05920 1178 aa11.32□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Ppp1r13bQ62415 1087 aa11.32□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Cabs1Q8C633 391 aa11.32□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Usp20Q8C6M1 916 aa11.32□□□□□ -0.6
Rnf40-201ENSMUST00000033088 4921524L21RikQ9D5T2 438 aa11.32□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Nhsl1Q8CAF4 1587 aa11.32□□□□□ -0.6
Rnf40-201ENSMUST00000033088 AtrnQ9WU60 1428 aa11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Banf1O54962 89 aa11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Pias1O88907 651 aa11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Ubn1Q4G0F8 1135 aa11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Sh3tc2Q80VA5 1289 aa11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Agap1Q8BXK8 857 aaKnown RBP11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Trim47Q8C0E3 641 aa11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Kat14Q8CID0 779 aa11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Stap2Q8R0L1 411 aa11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Lrrc42Q8R2U7 421 aa11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Ccdc65Q8VHI7 493 aa11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Catsper1Q91ZR5 686 aa11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 4931423N10RikQ9D4J9 382 aa11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Ppp1r12aQ9DBR7 1029 aaKnown RBP11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Rnf25Q9QZR0 456 aa11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Ggt5Q9Z2A9 573 aa11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Ssc5dQ8BV57 1371 aa11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Syngap1F6SEU4 1340 aa11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Kpnb1P70168 876 aaKnown RBP11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Aars2Q14CH7 980 aa11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Sh3rf1Q69ZI1 892 aa11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Arhgap26Q6ZQ82 814 aa11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 PolnQ7TQ07 864 aa11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Kat5Q8CHK4 513 aa11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Rnf112Q96DY5 654 aa11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Mms19Q9D071 1031 aa11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Atp11cQ9QZW0 1129 aa11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Scgb2b7D3YYY1 112 aa11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Raph1F2Z3U3 1266 aa11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Cyp4f17G3UW78 524 aa11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Zfp275G3X904 499 aa11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Zfp105G3X9I0 524 aa11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Psen1P49769 467 aa11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 PhbP67778 272 aaKnown RBP11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Mcl1P97287 331 aa11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Tmtc1Q3UV71 942 aa11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Hmgb4Q6P8W9 181 aa11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 R3hdm2Q80TM6 1044 aaKnown RBP11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 TufmQ8BFR5 452 aa11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 AarsQ8BGQ7 968 aa11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Fsd1lQ8BYN5 507 aa11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Arhgap29Q8CGF1 1266 aa11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Bst2Q8R2Q8 172 aa11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Guca1bQ8VBV8 201 aa11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Cyp4f16Q99N17 524 aa11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Rnf135Q9CWS1 417 aa11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Tdrd12Q9CWU0 1215 aa11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Eif4enif1Q9EST3 983 aaKnown RBP11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 GakQ99KY4 1305 aa11.31□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Zfp558E9Q1J0 407 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Slc3a2P10852 526 aaKnown RBP11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Pbx1P41778 430 aa11.3□□□□□ -0.6
Rnf40-201ENSMUST00000033088 RalaP63321 206 aa11.3□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 31.3 ms