RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeast

Gene TGA1, Length 73 nt, Biotype tRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TGA1	tA(UGC)A	SHE1	P38200	338 aa		6.95	□□□□□ -1.3
TGA1	tA(UGC)A	YHR035W	P38769	630 aa		6.95	□□□□□ -1.3
TGA1	tA(UGC)A	NTA1	P40354	457 aa		6.95	□□□□□ -1.3
TGA1	tA(UGC)A	FLX1	P40464	311 aa		6.95	□□□□□ -1.3
TGA1	tA(UGC)A	GLR1	P41921	483 aa	Known RBP	6.95	□□□□□ -1.3
TGA1	tA(UGC)A	YJL055W	P47044	245 aa		6.95	□□□□□ -1.3
TGA1	tA(UGC)A	SAM50	P53969	484 aa		6.95	□□□□□ -1.3
TGA1	tA(UGC)A	RSM23	Q01163	450 aa		6.95	□□□□□ -1.3
TGA1	tA(UGC)A	YPL077C	Q02831	240 aa		6.95	□□□□□ -1.3
TGA1	tA(UGC)A	GSH2	Q08220	491 aa		6.95	□□□□□ -1.3
TGA1	tA(UGC)A	YOR238W	Q08634	303 aa		6.95	□□□□□ -1.3
TGA1	tA(UGC)A	TRM10	Q12400	293 aa		6.95	□□□□□ -1.3
TGA1	tA(UGC)A	SPO24	Q3E752	67 aa		6.95	□□□□□ -1.3
TGA1	tA(UGC)A	FSH3	Q99369	266 aa		6.95	□□□□□ -1.3
TGA1	tA(UGC)A	RPL6B	P05739	176 aa	Known RBP	6.94	□□□□□ -1.3
TGA1	tA(UGC)A	PUT3	P25502	979 aa	Predicted RBP	6.94	□□□□□ -1.3
TGA1	tA(UGC)A	SSE2	P32590	693 aa	Known RBP	6.94	□□□□□ -1.3
TGA1	tA(UGC)A	MDM31	P38880	579 aa		6.94	□□□□□ -1.3
TGA1	tA(UGC)A	PMT6	P42934	759 aa		6.94	□□□□□ -1.3
TGA1	tA(UGC)A	NCA3	P46955	337 aa		6.94	□□□□□ -1.3
TGA1	tA(UGC)A	CCC1	P47818	322 aa		6.94	□□□□□ -1.3
TGA1	tA(UGC)A	SBH2	P52871	88 aa		6.94	□□□□□ -1.3
TGA1	tA(UGC)A	YNL046W	P53956	172 aa		6.94	□□□□□ -1.3
TGA1	tA(UGC)A	YPR196W	Q06595	470 aa		6.94	□□□□□ -1.3
TGA1	tA(UGC)A	FRE6	Q12473	712 aa		6.94	□□□□□ -1.3
TGA1	tA(UGC)A	LSO1	Q3E827	93 aa		6.94	□□□□□ -1.3
TGA1	tA(UGC)A	VCX1	Q99385	411 aa		6.94	□□□□□ -1.3
TGA1	tA(UGC)A	ARO3	P14843	370 aa	Known RBP	6.93	□□□□□ -1.3
TGA1	tA(UGC)A	RPS5	P26783	225 aa	Known RBP	6.93	□□□□□ -1.3
TGA1	tA(UGC)A	FRM2	P37261	193 aa		6.93	□□□□□ -1.3
TGA1	tA(UGC)A	FAT1	P38225	669 aa		6.93	□□□□□ -1.3
TGA1	tA(UGC)A	YIR020C	P40575	100 aa		6.93	□□□□□ -1.3
TGA1	tA(UGC)A	TYW3	P53177	273 aa		6.93	□□□□□ -1.3
TGA1	tA(UGC)A	HLR1	Q04429	423 aa		6.93	□□□□□ -1.3
TGA1	tA(UGC)A	RKM1	Q08961	583 aa	Predicted RBP	6.93	□□□□□ -1.3
TGA1	tA(UGC)A	TGS1	Q12052	315 aa		6.93	□□□□□ -1.3
TGA1	tA(UGC)A	RDL1	Q12305	139 aa	Known RBP	6.93	□□□□□ -1.3
TGA1	tA(UGC)A	GEP5	Q12393	293 aa		6.93	□□□□□ -1.3
TGA1	tA(UGC)A	ISA2	Q12425	185 aa		6.93	□□□□□ -1.3
TGA1	tA(UGC)A	MED11	Q99278	115 aa		6.93	□□□□□ -1.3
TGA1	tA(UGC)A	SOD2	P00447	233 aa		6.92	□□□□□ -1.3
TGA1	tA(UGC)A	MDH1	P17505	334 aa	Known RBP RIP-Chip data	6.92	□□□□□ -1.3	not detected
TGA1	tA(UGC)A	HNM1	P19807	563 aa		6.92	□□□□□ -1.3
TGA1	tA(UGC)A	TIF3	P34167	436 aa	Known RBP	6.92	□□□□□ -1.3
TGA1	tA(UGC)A	PEX32	P38292	413 aa		6.92	□□□□□ -1.3
TGA1	tA(UGC)A	ATF1	P40353	525 aa		6.92	□□□□□ -1.3
TGA1	tA(UGC)A	DIG2	Q03373	323 aa	Known RBP	6.92	□□□□□ -1.3
TGA1	tA(UGC)A	FIN1	Q03898	291 aa		6.92	□□□□□ -1.3
TGA1	tA(UGC)A	DLT1	Q04216	342 aa		6.92	□□□□□ -1.3
TGA1	tA(UGC)A	TPO3	Q06451	622 aa		6.92	□□□□□ -1.3
TGA1	tA(UGC)A	YOL114C	Q12322	202 aa		6.92	□□□□□ -1.3
TGA1	tA(UGC)A	TDH3	P00359	332 aa	Known RBP RIP-Chip data	6.91	□□□□□ -1.3	not detected
TGA1	tA(UGC)A	COX9	P07255	59 aa		6.91	□□□□□ -1.3
TGA1	tA(UGC)A	YGL041W-A	P0C5N3	154 aa		6.91	□□□□□ -1.3
TGA1	tA(UGC)A	NAM2	P11325	894 aa		6.91	□□□□□ -1.3
TGA1	tA(UGC)A	ENA1	P13587	1091 aa		6.91	□□□□□ -1.3
TGA1	tA(UGC)A	REC114	P32841	428 aa		6.91	□□□□□ -1.3
TGA1	tA(UGC)A	MRT4	P33201	236 aa	Known RBP	6.91	□□□□□ -1.3
TGA1	tA(UGC)A	ZRT3	P34240	503 aa		6.91	□□□□□ -1.3
TGA1	tA(UGC)A	MTC2	P34246	357 aa		6.91	□□□□□ -1.3
TGA1	tA(UGC)A	SDP1	P40479	209 aa		6.91	□□□□□ -1.3
TGA1	tA(UGC)A	PAU12	P53343	120 aa		6.91	□□□□□ -1.3
TGA1	tA(UGC)A	ENA2	Q01896	1091 aa		6.91	□□□□□ -1.3
TGA1	tA(UGC)A	GAL83	Q04739	417 aa		6.91	□□□□□ -1.3
TGA1	tA(UGC)A	SSK1	Q07084	712 aa		6.91	□□□□□ -1.3
TGA1	tA(UGC)A	FRE3	Q08905	711 aa		6.91	□□□□□ -1.3
TGA1	tA(UGC)A	FRE5	Q08908	694 aa		6.91	□□□□□ -1.3
TGA1	tA(UGC)A	RTR2	Q12378	196 aa		6.91	□□□□□ -1.3
TGA1	tA(UGC)A	ENA5	Q12691	1091 aa		6.91	□□□□□ -1.3
TGA1	tA(UGC)A	DEG1	P31115	442 aa	Known RBP	6.9	□□□□□ -1.3
TGA1	tA(UGC)A	YOX1	P34161	385 aa		6.9	□□□□□ -1.3
TGA1	tA(UGC)A	YKR015C	P36111	568 aa		6.9	□□□□□ -1.3
TGA1	tA(UGC)A	GOS1	P38736	223 aa		6.9	□□□□□ -1.3
TGA1	tA(UGC)A	YCK3	P39962	524 aa		6.9	□□□□□ -1.3
TGA1	tA(UGC)A	MSS2	P40990	351 aa		6.9	□□□□□ -1.3
TGA1	tA(UGC)A	AAD14	P42884	376 aa		6.9	□□□□□ -1.3
TGA1	tA(UGC)A	PHB2	P50085	310 aa		6.9	□□□□□ -1.3
TGA1	tA(UGC)A	MTL1	P53214	551 aa		6.9	□□□□□ -1.3
TGA1	tA(UGC)A	AAH1	P53909	347 aa		6.9	□□□□□ -1.3
TGA1	tA(UGC)A	CIK1	Q01649	594 aa		6.9	□□□□□ -1.3
TGA1	tA(UGC)A	YDC1	Q02896	317 aa		6.9	□□□□□ -1.3
TGA1	tA(UGC)A	GMC1	Q04399	608 aa		6.9	□□□□□ -1.3
TGA1	tA(UGC)A	YOR378W	Q08902	515 aa		6.9	□□□□□ -1.3
TGA1	tA(UGC)A	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	6.9	□□□□□ -1.3	not detected
TGA1	tA(UGC)A	REP1	P03871	373 aa		6.89	□□□□□ -1.31
TGA1	tA(UGC)A	YML003W	P0CF16	290 aa		6.89	□□□□□ -1.31
TGA1	tA(UGC)A	MRP1	P10662	321 aa	Known RBP	6.89	□□□□□ -1.31
TGA1	tA(UGC)A	HXT2	P23585	541 aa		6.89	□□□□□ -1.31
TGA1	tA(UGC)A	MKS1	P34072	584 aa		6.89	□□□□□ -1.31
TGA1	tA(UGC)A	MCH2	P36032	473 aa		6.89	□□□□□ -1.31
TGA1	tA(UGC)A	SDS22	P36047	338 aa		6.89	□□□□□ -1.31
TGA1	tA(UGC)A	SDS24	P38314	527 aa		6.89	□□□□□ -1.31
TGA1	tA(UGC)A	ARC40	P38328	384 aa	Known RBP	6.89	□□□□□ -1.31
TGA1	tA(UGC)A	TIR3	P40552	269 aa		6.89	□□□□□ -1.31
TGA1	tA(UGC)A	CIN2	P46670	268 aa		6.89	□□□□□ -1.31
TGA1	tA(UGC)A	LYS20	P48570	428 aa	Known RBP	6.89	□□□□□ -1.31
TGA1	tA(UGC)A	MSS11	Q03825	758 aa		6.89	□□□□□ -1.31
TGA1	tA(UGC)A	RBS1	Q05672	457 aa	Known RBP	6.89	□□□□□ -1.31
TGA1	tA(UGC)A	LYS21	Q12122	440 aa	Known RBP	6.89	□□□□□ -1.31
TGA1	tA(UGC)A	MSI1	P13712	422 aa		6.88	□□□□□ -1.31

Retrieved 100 of 5,963 RNA–protein pairs in 320.5 ms