RNA–Protein interactions for RNA: YPR133C

SPN1, Transcript of Protein involved in RNA polymerase II transcription, yeastyeast

Gene SPN1, Length 1,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPN1YPR133C SCS7Q03529 384 aa3.64□□□□□ -1.83
SPN1YPR133C YDL242WQ07746 117 aa3.64□□□□□ -1.83
SPN1YPR133C BRX1Q08235 291 aaKnown RBP3.64□□□□□ -1.83
SPN1YPR133C SGT1Q08446 395 aa3.64□□□□□ -1.83
SPN1YPR133C NIP7Q08962 181 aaKnown RBP3.64□□□□□ -1.83
SPN1YPR133C MED2Q12124 431 aa3.64□□□□□ -1.83
SPN1YPR133C YNL162W-AQ3E7A8 72 aa3.64□□□□□ -1.83
SPN1YPR133C MER1P16523 270 aa3.63□□□□□ -1.83
SPN1YPR133C EXG1P23776 448 aaKnown RBP3.63□□□□□ -1.83
SPN1YPR133C PHO91P27514 894 aa3.63□□□□□ -1.83
SPN1YPR133C LHP1P33399 275 aaKnown RBP3.63□□□□□ -1.83
SPN1YPR133C MRPL17P36528 281 aa3.63□□□□□ -1.83
SPN1YPR133C ZTA1P38230 334 aaKnown RBP3.63□□□□□ -1.83
SPN1YPR133C UIP3P39547 235 aa3.63□□□□□ -1.83
SPN1YPR133C RGI1P40043 161 aaPredicted RBP3.63□□□□□ -1.83
SPN1YPR133C POP1P41812 875 aa3.63□□□□□ -1.83
SPN1YPR133C MTQ1P53944 314 aa3.63□□□□□ -1.83
SPN1YPR133C YDR179W-AQ03983 463 aa3.63□□□□□ -1.83
SPN1YPR133C SNA4Q07549 140 aa3.63□□□□□ -1.83
SPN1YPR133C FRE3Q08905 711 aa3.63□□□□□ -1.83
SPN1YPR133C BTS1Q12051 335 aa3.63□□□□□ -1.83
SPN1YPR133C RTC5Q12108 567 aaKnown RBP3.63□□□□□ -1.83
SPN1YPR133C RNH203Q12338 110 aa3.63□□□□□ -1.83
SPN1YPR133C RPN6Q12377 434 aa3.63□□□□□ -1.83
SPN1YPR133C NOT5Q12514 560 aaPredicted RBP3.63□□□□□ -1.83
SPN1YPR133C YDL007C-AQ2V2Q0 85 aa3.63□□□□□ -1.83
SPN1YPR133C PEP4P07267 405 aaKnown RBP3.62□□□□□ -1.83
SPN1YPR133C YMR085WP0CF18 432 aa3.62□□□□□ -1.83
SPN1YPR133C MSI1P13712 422 aa3.62□□□□□ -1.83
SPN1YPR133C UGA1P17649 471 aa3.62□□□□□ -1.83
SPN1YPR133C SPO7P18410 259 aa3.62□□□□□ -1.83
SPN1YPR133C RPS1BP23248 255 aaKnown RBP3.62□□□□□ -1.83
SPN1YPR133C HSP30P25619 332 aa3.62□□□□□ -1.83
SPN1YPR133C RPS5P26783 225 aaKnown RBP3.62□□□□□ -1.83
SPN1YPR133C LAC1P28496 418 aa3.62□□□□□ -1.83
SPN1YPR133C PPQ1P32945 549 aa3.62□□□□□ -1.83
SPN1YPR133C YBR144CP34215 104 aa3.62□□□□□ -1.83
SPN1YPR133C ROT2P38138 954 aa3.62□□□□□ -1.83
SPN1YPR133C YPT10P38146 199 aa3.62□□□□□ -1.83
SPN1YPR133C GDT1P38301 280 aaPredicted RBP3.62□□□□□ -1.83
SPN1YPR133C TSC10P38342 320 aa3.62□□□□□ -1.83
SPN1YPR133C WSS1P38838 269 aa3.62□□□□□ -1.83
SPN1YPR133C KRE29P40026 464 aa3.62□□□□□ -1.83
SPN1YPR133C YER121WP40076 114 aa3.62□□□□□ -1.83
SPN1YPR133C DPB11P47027 764 aaPredicted RBP3.62□□□□□ -1.83
SPN1YPR133C IGO1P53897 168 aa3.62□□□□□ -1.83
SPN1YPR133C RSC9Q03124 581 aa3.62□□□□□ -1.83
SPN1YPR133C PRM15Q03262 622 aa3.62□□□□□ -1.83
SPN1YPR133C ACL4Q03771 387 aa3.62□□□□□ -1.83
SPN1YPR133C FAR8Q05040 523 aa3.62□□□□□ -1.83
SPN1YPR133C SSQ1Q05931 657 aaPredicted RBP3.62□□□□□ -1.83
SPN1YPR133C PIN3Q06449 215 aa3.62□□□□□ -1.83
SPN1YPR133C YPR147CQ06522 304 aaKnown RBP3.62□□□□□ -1.83
SPN1YPR133C GAT3Q07928 141 aa3.62□□□□□ -1.83
SPN1YPR133C YPR202WQ08993 238 aa3.62□□□□□ -1.83
SPN1YPR133C INP53Q12271 1107 aa3.62□□□□□ -1.83
SPN1YPR133C YOR343CQ12484 108 aa3.62□□□□□ -1.83
SPN1YPR133C AAC1P04710 309 aa3.61□□□□□ -1.83
SPN1YPR133C RPL6BP05739 176 aaKnown RBP3.61□□□□□ -1.83
SPN1YPR133C AFG1P32317 509 aa3.61□□□□□ -1.83
SPN1YPR133C VMA11P32842 164 aa3.61□□□□□ -1.83
SPN1YPR133C RCK1P38622 512 aa3.61□□□□□ -1.83
SPN1YPR133C BIG1P38813 335 aa3.61□□□□□ -1.83
SPN1YPR133C YGR149WP48236 432 aa3.61□□□□□ -1.83
SPN1YPR133C UBC13P52490 153 aa3.61□□□□□ -1.83
SPN1YPR133C MRM2P53123 320 aa3.61□□□□□ -1.83
SPN1YPR133C RIM9Q04734 239 aa3.61□□□□□ -1.83
SPN1YPR133C ATG38Q05789 226 aaKnown RBP3.61□□□□□ -1.83
SPN1YPR133C CSI2Q08054 341 aa3.61□□□□□ -1.83
SPN1YPR133C FIT3Q08907 204 aa3.61□□□□□ -1.83
SPN1YPR133C TGS1Q12052 315 aa3.61□□□□□ -1.83
SPN1YPR133C TFB5Q3E7C1 72 aaPredicted RBP3.61□□□□□ -1.83
SPN1YPR133C YHR214C-EQ8TGK0 99 aa3.61□□□□□ -1.83
SPN1YPR133C FSH3Q99369 266 aa3.61□□□□□ -1.83
SPN1YPR133C RPS23AP0CX29 145 aaKnown RBP3.6□□□□□ -1.83
SPN1YPR133C RPS23BP0CX30 145 aa3.6□□□□□ -1.83
SPN1YPR133C RPB8P20436 146 aa3.6□□□□□ -1.83
SPN1YPR133C DBP3P20447 523 aaKnown RBP3.6□□□□□ -1.83
SPN1YPR133C CCA1P21269 546 aa3.6□□□□□ -1.83
SPN1YPR133C GIT1P25346 518 aa3.6□□□□□ -1.83
SPN1YPR133C MDH3P32419 343 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
SPN1YPR133C CLB6P32943 380 aa3.6□□□□□ -1.83
SPN1YPR133C SPT10P35208 640 aa3.6□□□□□ -1.83
SPN1YPR133C MLH1P38920 769 aa3.6□□□□□ -1.83
SPN1YPR133C MNN9P39107 395 aaKnown RBP3.6□□□□□ -1.83
SPN1YPR133C GLR1P41921 483 aaKnown RBP3.6□□□□□ -1.83
SPN1YPR133C ECM27P47144 725 aa3.6□□□□□ -1.83
SPN1YPR133C MPP6P53725 186 aaPredicted RBP3.6□□□□□ -1.83
SPN1YPR133C YMR279CQ03263 540 aa3.6□□□□□ -1.83
SPN1YPR133C RVB1Q03940 463 aaKnown RBP3.6□□□□□ -1.83
SPN1YPR133C PHO92Q06390 306 aa3.6□□□□□ -1.83
SPN1YPR133C COQ10Q08058 207 aa3.6□□□□□ -1.83
SPN1YPR133C MUM3Q08750 479 aa3.6□□□□□ -1.83
SPN1YPR133C FRE8Q12209 686 aa3.6□□□□□ -1.83
SPN1YPR133C NCA2Q12374 616 aa3.6□□□□□ -1.83
SPN1YPR133C RPS16AP0CX51 143 aaKnown RBP3.59□□□□□ -1.83
SPN1YPR133C RPS16BP0CX52 143 aaKnown RBP3.59□□□□□ -1.83
SPN1YPR133C ARO3P14843 370 aaKnown RBP3.59□□□□□ -1.83
SPN1YPR133C YPK2P18961 677 aa3.59□□□□□ -1.83
SPN1YPR133C ELO2P25358 347 aa3.59□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms