RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W NPC2Q12408 173 aa2.03□□□□□ -2.09
SEC16YPL085W VPS63O13549 108 aa2.02□□□□□ -2.09
SEC16YPL085W CYC7P00045 113 aa2.02□□□□□ -2.09
SEC16YPL085W IPP1P00817 287 aaKnown RBP2.02□□□□□ -2.09
SEC16YPL085W YFR010W-AP0C5N0 62 aa2.02□□□□□ -2.09
SEC16YPL085W RPL35AP0CX84 120 aaKnown RBP2.02□□□□□ -2.09
SEC16YPL085W RPL35BP0CX85 120 aaKnown RBP2.02□□□□□ -2.09
SEC16YPL085W AST1P35183 429 aa2.02□□□□□ -2.09
SEC16YPL085W APL3P38065 1025 aa2.02□□□□□ -2.09
SEC16YPL085W HHT1P61830 136 aa2.02□□□□□ -2.09
SEC16YPL085W YML018CQ03730 393 aa2.02□□□□□ -2.09
SEC16YPL085W FIT1Q04433 528 aa2.02□□□□□ -2.09
SEC16YPL085W CRR1Q05790 422 aa2.02□□□□□ -2.09
SEC16YPL085W CDA2Q06703 312 aa2.02□□□□□ -2.09
SEC16YPL085W PAM18Q07914 168 aa2.02□□□□□ -2.09
SEC16YPL085W BSC6Q08280 497 aa2.02□□□□□ -2.09
SEC16YPL085W SYC1Q08553 188 aaPredicted RBP2.02□□□□□ -2.09
SEC16YPL085W FRE5Q08908 694 aa2.02□□□□□ -2.09
SEC16YPL085W YOR342CQ12182 319 aa2.02□□□□□ -2.09
SEC16YPL085W FYV7Q12247 151 aa2.02□□□□□ -2.09
SEC16YPL085W HMRA2P0CY13 119 aa2.02□□□□□ -2.09
SEC16YPL085W DBP2P24783 546 aaKnown RBP2.02□□□□□ -2.09
SEC16YPL085W MDH3P32419 343 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09not detected
SEC16YPL085W LYP1P32487 611 aa2.02□□□□□ -2.09
SEC16YPL085W SNC2P33328 115 aa2.02□□□□□ -2.09
SEC16YPL085W FAT1P38225 669 aa2.02□□□□□ -2.09
SEC16YPL085W AAD14P42884 376 aa2.02□□□□□ -2.09
SEC16YPL085W AIM25P47140 327 aa2.02□□□□□ -2.09
SEC16YPL085W DAN4P47179 1161 aa2.02□□□□□ -2.09
SEC16YPL085W SOL1P50278 321 aa2.02□□□□□ -2.09
SEC16YPL085W YIP4P53093 235 aa2.02□□□□□ -2.09
SEC16YPL085W DUO1P53168 247 aaKnown RBP2.02□□□□□ -2.09
SEC16YPL085W YGR126WP53274 230 aa2.02□□□□□ -2.09
SEC16YPL085W YDR179W-AQ03983 463 aa2.02□□□□□ -2.09
SEC16YPL085W PIN3Q06449 215 aa2.02□□□□□ -2.09
SEC16YPL085W YLR036CQ07986 203 aa2.02□□□□□ -2.09
SEC16YPL085W YOR059CQ08448 450 aaKnown RBP2.02□□□□□ -2.09
SEC16YPL085W YOR352WQ08816 343 aa2.02□□□□□ -2.09
SEC16YPL085W YPR1Q12458 312 aa2.02□□□□□ -2.09
SEC16YPL085W YPR015CQ12531 247 aa2.02□□□□□ -2.09
SEC16YPL085W YPL119C-AQ3E751 87 aa2.02□□□□□ -2.09
SEC16YPL085W RIM15P43565 1770 aa2.02□□□□□ -2.09
SEC16YPL085W GPM1P00950 247 aaKnown RBP2.02□□□□□ -2.09
SEC16YPL085W ERD2P18414 219 aa2.02□□□□□ -2.09
SEC16YPL085W DAL80P26343 269 aa2.02□□□□□ -2.09
SEC16YPL085W PRE2P30656 287 aaKnown RBP2.02□□□□□ -2.09
SEC16YPL085W LHP1P33399 275 aaKnown RBP2.02□□□□□ -2.09
SEC16YPL085W AHP1P38013 176 aaKnown RBP2.02□□□□□ -2.09
SEC16YPL085W CTF8P38877 133 aa2.02□□□□□ -2.09
SEC16YPL085W AIR1P40507 360 aaKnown RBP2.02□□□□□ -2.09
SEC16YPL085W URM1P40554 99 aaPredicted RBP2.02□□□□□ -2.09
SEC16YPL085W CRZ1P53968 678 aa2.02□□□□□ -2.09
SEC16YPL085W YCL001W-AP87012 153 aa2.02□□□□□ -2.09
SEC16YPL085W FDC1Q03034 503 aa2.02□□□□□ -2.09
SEC16YPL085W YHM2Q04013 314 aa2.02□□□□□ -2.09
SEC16YPL085W YPR063CQ12160 140 aa2.02□□□□□ -2.09
SEC16YPL085W QCR9P22289 66 aa2.02□□□□□ -2.09
SEC16YPL085W YCR015CP25616 317 aa2.02□□□□□ -2.09
SEC16YPL085W HOM6P31116 359 aaKnown RBP2.02□□□□□ -2.09
SEC16YPL085W NHP2P32495 156 aaPredicted RBP2.02□□□□□ -2.09
SEC16YPL085W PAN3P36102 679 aaPredicted RBP2.02□□□□□ -2.09
SEC16YPL085W POP2P39008 433 aa2.02□□□□□ -2.09
SEC16YPL085W CCS1P40202 249 aaKnown RBP2.02□□□□□ -2.09
SEC16YPL085W GLC8P41818 229 aa2.02□□□□□ -2.09
SEC16YPL085W MGA1P53050 456 aa2.02□□□□□ -2.09
SEC16YPL085W YPS3Q12303 508 aa2.02□□□□□ -2.09
SEC16YPL085W YBR255C-AQ3E776 120 aa2.02□□□□□ -2.09
SEC16YPL085W PET20Q99373 253 aa2.02□□□□□ -2.09
SEC16YPL085W FKS3Q04952 1785 aa2.02□□□□□ -2.09
SEC16YPL085W SAC1P32368 623 aaKnown RBP2.02□□□□□ -2.09
SEC16YPL085W AIM3P38266 947 aaKnown RBP2.02□□□□□ -2.09
SEC16YPL085W GET2P40056 285 aa2.02□□□□□ -2.09
SEC16YPL085W YNL046WP53956 172 aa2.02□□□□□ -2.09
SEC16YPL085W APC4Q04601 652 aa2.02□□□□□ -2.09
SEC16YPL085W AEP3Q12089 606 aa2.02□□□□□ -2.09
SEC16YPL085W COX17Q12287 69 aa2.02□□□□□ -2.09
SEC16YPL085W RAD10P06838 210 aa2.01□□□□□ -2.09
SEC16YPL085W HTS1P07263 546 aaKnown RBP2.01□□□□□ -2.09
SEC16YPL085W NHP6BP11633 99 aaKnown RBP2.01□□□□□ -2.09
SEC16YPL085W VPS34P22543 875 aa2.01□□□□□ -2.09
SEC16YPL085W MRP17P28778 131 aa2.01□□□□□ -2.09
SEC16YPL085W SUA5P32579 426 aa2.01□□□□□ -2.09
SEC16YPL085W COS9P36034 407 aa2.01□□□□□ -2.09
SEC16YPL085W PCL5P38794 229 aa2.01□□□□□ -2.09
SEC16YPL085W AVT4P50944 713 aa2.01□□□□□ -2.09
SEC16YPL085W YKR011CQ02209 353 aa2.01□□□□□ -2.09
SEC16YPL085W PUN1Q06991 263 aa2.01□□□□□ -2.09
SEC16YPL085W SKN1P33336 771 aa2.01□□□□□ -2.09
SEC16YPL085W SHM2P37291 469 aaKnown RBP2.01□□□□□ -2.09
SEC16YPL085W NSG1P38837 291 aa2.01□□□□□ -2.09
SEC16YPL085W TVP23P38962 199 aa2.01□□□□□ -2.09
SEC16YPL085W YCH1P42937 148 aa2.01□□□□□ -2.09
SEC16YPL085W YPL068CQ02749 293 aa2.01□□□□□ -2.09
SEC16YPL085W NCE101Q02820 53 aa2.01□□□□□ -2.09
SEC16YPL085W PIR1Q03178 341 aa2.01□□□□□ -2.09
SEC16YPL085W YMR010WQ03687 405 aa2.01□□□□□ -2.09
SEC16YPL085W SCP1Q08873 200 aa2.01□□□□□ -2.09
SEC16YPL085W INP53Q12271 1107 aa2.01□□□□□ -2.09
SEC16YPL085W URB1P34241 1764 aaKnown RBP2.01□□□□□ -2.09
SEC16YPL085W STE2D6VTK4 431 aa2.01□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 36.4 ms