RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W YLR345WQ06137 509 aa9.02□□□□□ -0.97
PRE6YOL038W YPQ2Q06328 317 aa9.02□□□□□ -0.97
PRE6YOL038W AIR2Q12476 344 aaKnown RBP9.02□□□□□ -0.97
PRE6YOL038W YBL113CQ7M4S9 792 aa9.02□□□□□ -0.97
PRE6YOL038W YER145C-AA0A023PYF4 145 aa9.01□□□□□ -0.97
PRE6YOL038W SCEIP03882 235 aa9.01□□□□□ -0.97
PRE6YOL038W MSI1P13712 422 aa9.01□□□□□ -0.97
PRE6YOL038W HNM1P19807 563 aa9.01□□□□□ -0.97
PRE6YOL038W VMA11P32842 164 aa9.01□□□□□ -0.97
PRE6YOL038W YBR285WP38354 144 aa9.01□□□□□ -0.97
PRE6YOL038W IPT1P38954 527 aa9.01□□□□□ -0.97
PRE6YOL038W CTK2P46962 323 aa9.01□□□□□ -0.97
PRE6YOL038W AIM6Q07716 390 aa9.01□□□□□ -0.97
PRE6YOL038W CSI2Q08054 341 aa9.01□□□□□ -0.97
PRE6YOL038W RRI1Q12468 440 aa9.01□□□□□ -0.97
PRE6YOL038W FUN19P28003 413 aaPredicted RBP9□□□□□ -0.97
PRE6YOL038W SUR1P33300 382 aa9□□□□□ -0.97
PRE6YOL038W YKR015CP36111 568 aa9□□□□□ -0.97
PRE6YOL038W YHR035WP38769 630 aa9□□□□□ -0.97
PRE6YOL038W TIR3P40552 269 aa9□□□□□ -0.97
PRE6YOL038W MSS2P40990 351 aa9□□□□□ -0.97
PRE6YOL038W COS10P52924 374 aa9□□□□□ -0.97
PRE6YOL038W RSM23Q01163 450 aa9□□□□□ -0.97
PRE6YOL038W MRX8Q05473 314 aa9□□□□□ -0.97
PRE6YOL038W RRP15Q06511 250 aaPredicted RBP9□□□□□ -0.97
PRE6YOL038W PST2Q12335 198 aaKnown RBP9□□□□□ -0.97
PRE6YOL038W RAS1P01119 309 aa8.99□□□□□ -0.97
PRE6YOL038W ARO3P14843 370 aaKnown RBP8.99□□□□□ -0.97
PRE6YOL038W RPA135P22138 1203 aaKnown RBP8.99□□□□□ -0.97
PRE6YOL038W FPS1P23900 669 aa8.99□□□□□ -0.97
PRE6YOL038W DEG1P31115 442 aaKnown RBP8.99□□□□□ -0.97
PRE6YOL038W NDC1P32500 655 aa8.99□□□□□ -0.97
PRE6YOL038W TIF3P34167 436 aaKnown RBP8.99□□□□□ -0.97
PRE6YOL038W YLF2P38746 405 aa8.99□□□□□ -0.97
PRE6YOL038W PUG1P40100 303 aa8.99□□□□□ -0.97
PRE6YOL038W RIO2P40160 425 aaKnown RBP8.99□□□□□ -0.97
PRE6YOL038W CIN2P46670 268 aa8.99□□□□□ -0.97
PRE6YOL038W YPR196WQ06595 470 aa8.99□□□□□ -0.97
PRE6YOL038W NKP1Q12493 238 aa8.99□□□□□ -0.97
PRE6YOL038W LSO1Q3E827 93 aa8.99□□□□□ -0.97
PRE6YOL038W MET3P08536 511 aa8.98□□□□□ -0.97
PRE6YOL038W MCH2P36032 473 aa8.98□□□□□ -0.97
PRE6YOL038W FAT1P38225 669 aa8.98□□□□□ -0.97
PRE6YOL038W EGD2P38879 174 aaKnown RBP8.98□□□□□ -0.97
PRE6YOL038W AIM10P39965 576 aaKnown RBP8.98□□□□□ -0.97
PRE6YOL038W RET2P43621 546 aa8.98□□□□□ -0.97
PRE6YOL038W PPT1P53043 513 aa8.98□□□□□ -0.97
PRE6YOL038W SLD3P53135 668 aa8.98□□□□□ -0.97
PRE6YOL038W SPO19Q03029 223 aa8.98□□□□□ -0.97
PRE6YOL038W GMC1Q04399 608 aa8.98□□□□□ -0.97
PRE6YOL038W YDR114CQ04597 100 aa8.98□□□□□ -0.97
PRE6YOL038W MSA1Q08471 629 aa8.98□□□□□ -0.97
PRE6YOL038W BCK2P33306 851 aa8.97□□□□□ -0.97
PRE6YOL038W ECM4P36156 370 aa8.97□□□□□ -0.97
PRE6YOL038W PHB2P50085 310 aa8.97□□□□□ -0.97
PRE6YOL038W PXR1P53335 271 aaPredicted RBP8.97□□□□□ -0.97
PRE6YOL038W DUG3P53871 357 aa8.97□□□□□ -0.97
PRE6YOL038W SAM50P53969 484 aa8.97□□□□□ -0.97
PRE6YOL038W HHT1P61830 136 aa8.97□□□□□ -0.97
PRE6YOL038W TLG1Q03322 224 aa8.97□□□□□ -0.97
PRE6YOL038W DLT1Q04216 342 aa8.97□□□□□ -0.97
PRE6YOL038W ATG17Q06410 417 aa8.97□□□□□ -0.97
PRE6YOL038W RKM1Q08961 583 aaPredicted RBP8.97□□□□□ -0.97
PRE6YOL038W PCL9Q12477 304 aa8.97□□□□□ -0.97
PRE6YOL038W RPL15AP05748 204 aaKnown RBP8.96□□□□□ -0.98
PRE6YOL038W YML003WP0CF16 290 aa8.96□□□□□ -0.98
PRE6YOL038W IDP1P21954 428 aaKnown RBP8.96□□□□□ -0.98
PRE6YOL038W ARO9P38840 513 aaPredicted RBP8.96□□□□□ -0.98
PRE6YOL038W BNA2P47125 453 aa8.96□□□□□ -0.98
PRE6YOL038W BUD17P53727 317 aa8.96□□□□□ -0.98
PRE6YOL038W RNH201P53942 307 aa8.96□□□□□ -0.98
PRE6YOL038W RPL15BP54780 204 aaPredicted RBP8.96□□□□□ -0.98
PRE6YOL038W TMA20P89886 181 aaPredicted RBP8.96□□□□□ -0.98
PRE6YOL038W YOR378WQ08902 515 aa8.96□□□□□ -0.98
PRE6YOL038W TDH3P00359 332 aaKnown RBP RIP-Chip data8.95□□□□□ -0.98not detected
PRE6YOL038W MRT4P33201 236 aaKnown RBP8.95□□□□□ -0.98
PRE6YOL038W ECT1P33412 323 aa8.95□□□□□ -0.98
PRE6YOL038W FRM2P37261 193 aa8.95□□□□□ -0.98
PRE6YOL038W GZF3P42944 551 aaKnown RBP8.95□□□□□ -0.98
PRE6YOL038W NOG1Q02892 647 aaKnown RBP8.95□□□□□ -0.98
PRE6YOL038W YDC1Q02896 317 aa8.95□□□□□ -0.98
PRE6YOL038W DIG2Q03373 323 aaKnown RBP8.95□□□□□ -0.98
PRE6YOL038W RIM9Q04734 239 aa8.95□□□□□ -0.98
PRE6YOL038W YMR315WQ04869 349 aaKnown RBP8.95□□□□□ -0.98
PRE6YOL038W RBS1Q05672 457 aaKnown RBP8.95□□□□□ -0.98
PRE6YOL038W YOR029WQ12243 111 aa8.95□□□□□ -0.98
PRE6YOL038W ISA2Q12425 185 aa8.95□□□□□ -0.98
PRE6YOL038W MED11Q99278 115 aa8.95□□□□□ -0.98
PRE6YOL038W REC114P32841 428 aa8.94□□□□□ -0.98
PRE6YOL038W YOX1P34161 385 aa8.94□□□□□ -0.98
PRE6YOL038W YPK3P38070 525 aa8.94□□□□□ -0.98
PRE6YOL038W SHE1P38200 338 aa8.94□□□□□ -0.98
PRE6YOL038W SOP4P39543 234 aaPredicted RBP8.94□□□□□ -0.98
PRE6YOL038W YHC3P47040 408 aa8.94□□□□□ -0.98
PRE6YOL038W YJL016WP47072 561 aa8.94□□□□□ -0.98
PRE6YOL038W ABM1P47146 123 aa8.94□□□□□ -0.98
PRE6YOL038W FIN1Q03898 291 aa8.94□□□□□ -0.98
PRE6YOL038W SOD2P00447 233 aa8.93□□□□□ -0.98
PRE6YOL038W MDM31P38880 579 aa8.93□□□□□ -0.98
PRE6YOL038W YER188WP40103 239 aa8.93□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms