RNA–Protein interactions for RNA: YLR220W

CCC1, Transcript of Vacuolar Fe2+/Mn2+ transporter, yeast

Gene CCC1, Length 969 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCC1	YLR220W	SPT10	P35208	640 aa		13.58	□□□□□ -0.24
CCC1	YLR220W	SDS24	P38314	527 aa		13.58	□□□□□ -0.24
CCC1	YLR220W	IDP2	P41939	412 aa		13.58	□□□□□ -0.24
CCC1	YLR220W	YLR099W-A	Q3E798	87 aa		13.58	□□□□□ -0.24
CCC1	YLR220W	SSA3	P09435	649 aa	Known RBP	13.57	□□□□□ -0.24
CCC1	YLR220W	YHL037C	P38733	133 aa		13.57	□□□□□ -0.24
CCC1	YLR220W	LOH1	P47055	219 aa		13.57	□□□□□ -0.24
CCC1	YLR220W	TNA1	P53322	534 aa		13.57	□□□□□ -0.24
CCC1	YLR220W	RPL6A	Q02326	176 aa	Known RBP	13.57	□□□□□ -0.24
CCC1	YLR220W	RCE1	Q03530	315 aa		13.57	□□□□□ -0.24
CCC1	YLR220W	MED2	Q12124	431 aa		13.57	□□□□□ -0.24
CCC1	YLR220W	IES3	Q12345	250 aa		13.57	□□□□□ -0.24
CCC1	YLR220W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	13.57	□□□□□ -0.24	not detected
CCC1	YLR220W	RPI1	P23250	407 aa	Known RBP	13.56	□□□□□ -0.24
CCC1	YLR220W	MTH1	P35198	433 aa		13.56	□□□□□ -0.24
CCC1	YLR220W	ACS2	P52910	683 aa	Known RBP	13.56	□□□□□ -0.24
CCC1	YLR220W	MTM1	P53320	366 aa		13.56	□□□□□ -0.24
CCC1	YLR220W	SAM50	P53969	484 aa		13.56	□□□□□ -0.24
CCC1	YLR220W	MSS11	Q03825	758 aa		13.56	□□□□□ -0.24
CCC1	YLR220W	GPN3	Q06543	272 aa		13.56	□□□□□ -0.24
CCC1	YLR220W	MCT1	Q12283	360 aa		13.56	□□□□□ -0.24
CCC1	YLR220W	IZH2	Q12442	317 aa		13.56	□□□□□ -0.24
CCC1	YLR220W	DCP1	Q12517	231 aa	Predicted RBP	13.56	□□□□□ -0.24
CCC1	YLR220W	SFK1	P35735	353 aa		13.55	□□□□□ -0.24
CCC1	YLR220W	FRM2	P37261	193 aa		13.55	□□□□□ -0.24
CCC1	YLR220W	TAT1	P38085	619 aa		13.55	□□□□□ -0.24
CCC1	YLR220W	YLR152C	P54072	576 aa		13.55	□□□□□ -0.24
CCC1	YLR220W	FRE3	Q08905	711 aa		13.55	□□□□□ -0.24
CCC1	YLR220W	TGS1	Q12052	315 aa		13.55	□□□□□ -0.24
CCC1	YLR220W	SOD2	P00447	233 aa		13.54	□□□□□ -0.24
CCC1	YLR220W	PCL1	P24867	279 aa		13.54	□□□□□ -0.24
CCC1	YLR220W	CLB2	P24869	491 aa		13.54	□□□□□ -0.24
CCC1	YLR220W	MRPS5	P33759	307 aa		13.54	□□□□□ -0.24
CCC1	YLR220W	YER084W	P40057	128 aa		13.54	□□□□□ -0.24
CCC1	YLR220W	AAD14	P42884	376 aa		13.54	□□□□□ -0.24
CCC1	YLR220W	LYS20	P48570	428 aa	Known RBP	13.54	□□□□□ -0.24
CCC1	YLR220W	YNL092W	P53934	400 aa		13.54	□□□□□ -0.24
CCC1	YLR220W	HAS1	Q03532	505 aa	Known RBP	13.54	□□□□□ -0.24
CCC1	YLR220W	MRPL35	Q06678	367 aa		13.54	□□□□□ -0.24
CCC1	YLR220W	BRE4	Q07660	1125 aa		13.54	□□□□□ -0.24
CCC1	YLR220W	LYS21	Q12122	440 aa	Known RBP	13.54	□□□□□ -0.24
CCC1	YLR220W	MSH5	Q12175	901 aa		13.54	□□□□□ -0.24
CCC1	YLR220W	COX5B	P00425	151 aa		13.53	□□□□□ -0.24
CCC1	YLR220W	RPL43A	P0CX25	92 aa	Known RBP	13.53	□□□□□ -0.24
CCC1	YLR220W	RPL43B	P0CX26	92 aa		13.53	□□□□□ -0.24
CCC1	YLR220W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	13.53	□□□□□ -0.24	not detected
CCC1	YLR220W	TDA1	Q03533	586 aa		13.53	□□□□□ -0.24
CCC1	YLR220W	RCN2	Q12044	265 aa		13.53	□□□□□ -0.24
CCC1	YLR220W	MATALPHA1	P0CY06	175 aa		13.52	□□□□□ -0.25
CCC1	YLR220W	HMLALPHA1	P0CY07	175 aa		13.52	□□□□□ -0.25
CCC1	YLR220W	CLG1	P35190	452 aa		13.52	□□□□□ -0.25
CCC1	YLR220W	QDR1	P40475	563 aa		13.52	□□□□□ -0.25
CCC1	YLR220W	HHT1	P61830	136 aa		13.52	□□□□□ -0.25
CCC1	YLR220W	NMA1	Q06178	401 aa	Known RBP	13.52	□□□□□ -0.25
CCC1	YLR220W	CDC39	P25655	2108 aa	Known RBP	13.51	□□□□□ -0.25
CCC1	YLR220W	HIS3	P06633	220 aa		13.51	□□□□□ -0.25
CCC1	YLR220W	PHO4	P07270	312 aa	Known RBP	13.51	□□□□□ -0.25
CCC1	YLR220W	NAM2	P11325	894 aa		13.51	□□□□□ -0.25
CCC1	YLR220W	SBA1	P28707	216 aa	Known RBP	13.51	□□□□□ -0.25
CCC1	YLR220W	MKS1	P34072	584 aa		13.51	□□□□□ -0.25
CCC1	YLR220W	ZRT3	P34240	503 aa		13.51	□□□□□ -0.25
CCC1	YLR220W	TIR3	P40552	269 aa		13.51	□□□□□ -0.25
CCC1	YLR220W	MOB2	P43563	287 aa		13.51	□□□□□ -0.25
CCC1	YLR220W	BNA6	P43619	295 aa		13.51	□□□□□ -0.25
CCC1	YLR220W	YJR120W	P47157	116 aa		13.51	□□□□□ -0.25
CCC1	YLR220W	SLI1	P53304	468 aa		13.51	□□□□□ -0.25
CCC1	YLR220W	RSM23	Q01163	450 aa		13.51	□□□□□ -0.25
CCC1	YLR220W	YDR391C	Q04170	232 aa		13.51	□□□□□ -0.25
CCC1	YLR220W	MRL1	Q06815	381 aa		13.51	□□□□□ -0.25
CCC1	YLR220W	NGL1	Q08213	363 aa	Known RBP	13.51	□□□□□ -0.25
CCC1	YLR220W	THI72	Q08579	599 aa		13.51	□□□□□ -0.25
CCC1	YLR220W	GCN4	P03069	281 aa		13.5	□□□□□ -0.25
CCC1	YLR220W	ERG4	P25340	473 aa		13.5	□□□□□ -0.25
CCC1	YLR220W	ERG24	P32462	438 aa	Known RBP	13.5	□□□□□ -0.25
CCC1	YLR220W	YBR137W	P38276	179 aa		13.5	□□□□□ -0.25
CCC1	YLR220W	DOC1	P53068	250 aa		13.5	□□□□□ -0.25
CCC1	YLR220W	DIG2	Q03373	323 aa	Known RBP	13.5	□□□□□ -0.25
CCC1	YLR220W	SOG2	Q08817	791 aa		13.5	□□□□□ -0.25
CCC1	YLR220W	ISA2	Q12425	185 aa		13.5	□□□□□ -0.25
CCC1	YLR220W	MCM1	P11746	286 aa		13.49	□□□□□ -0.25
CCC1	YLR220W	TMA19	P35691	167 aa	Known RBP	13.49	□□□□□ -0.25
CCC1	YLR220W	MBA1	P38300	278 aa		13.49	□□□□□ -0.25
CCC1	YLR220W	TOK1	P40310	691 aa		13.49	□□□□□ -0.25
CCC1	YLR220W	DLS1	P40366	167 aa		13.49	□□□□□ -0.25
CCC1	YLR220W	YIP4	P53093	235 aa		13.49	□□□□□ -0.25
CCC1	YLR220W	AAH1	P53909	347 aa		13.49	□□□□□ -0.25
CCC1	YLR220W	CIK1	Q01649	594 aa		13.49	□□□□□ -0.25
CCC1	YLR220W	TIR4	Q12218	487 aa	Predicted RBP	13.49	□□□□□ -0.25
CCC1	YLR220W	ADK1	P07170	222 aa	Known RBP	13.48	□□□□□ -0.25
CCC1	YLR220W	RTT105	P40063	208 aa		13.48	□□□□□ -0.25
CCC1	YLR220W	AVT7	P40501	490 aa		13.48	□□□□□ -0.25
CCC1	YLR220W	YFL051C	P43552	160 aa		13.48	□□□□□ -0.25
CCC1	YLR220W	CTK2	P46962	323 aa		13.48	□□□□□ -0.25
CCC1	YLR220W	SIP18	P50263	79 aa		13.48	□□□□□ -0.25
CCC1	YLR220W	WTM2	Q12206	467 aa		13.48	□□□□□ -0.25
CCC1	YLR220W	RTN2	Q12443	393 aa		13.48	□□□□□ -0.25
CCC1	YLR220W	SUS1	Q6WNK7	96 aa		13.48	□□□□□ -0.25
CCC1	YLR220W	MES1	P00958	751 aa	Known RBP	13.47	□□□□□ -0.25
CCC1	YLR220W	APL3	P38065	1025 aa		13.47	□□□□□ -0.25
CCC1	YLR220W	FCY21	P40039	528 aa		13.47	□□□□□ -0.25

Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms