RNA–Protein interactions for RNA: YLR040C

AFB1, Transcript of MATalpha-specific a-factor blocker, yeastyeast

Gene AFB1, Length 675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFB1YLR040C VPS60Q03390 229 aa1.52□□□□□ -2.17
AFB1YLR040C SUE1Q06524 206 aa1.52□□□□□ -2.17
AFB1YLR040C YOR268CQ08734 132 aa1.52□□□□□ -2.17
AFB1YLR040C YPL150WQ12152 901 aa1.52□□□□□ -2.17
AFB1YLR040C NOT5Q12514 560 aaPredicted RBP1.52□□□□□ -2.17
AFB1YLR040C NUP157P40064 1391 aaKnown RBP1.51□□□□□ -2.17
AFB1YLR040C RAD10P06838 210 aa1.51□□□□□ -2.17
AFB1YLR040C HMT1P38074 348 aa1.51□□□□□ -2.17
AFB1YLR040C HIS2P38635 335 aa1.51□□□□□ -2.17
AFB1YLR040C ARN2P38724 620 aa1.51□□□□□ -2.17
AFB1YLR040C VPS45P38932 577 aa1.51□□□□□ -2.17
AFB1YLR040C IBA57P47158 497 aa1.51□□□□□ -2.17
AFB1YLR040C COG7P53195 279 aa1.51□□□□□ -2.17
AFB1YLR040C SDC1Q03323 175 aa1.51□□□□□ -2.17
AFB1YLR040C CGI121Q03705 181 aaKnown RBP1.51□□□□□ -2.17
AFB1YLR040C ECM18Q04623 453 aa1.51□□□□□ -2.17
AFB1YLR040C MDY2Q12285 212 aa1.51□□□□□ -2.17
AFB1YLR040C CSG2P35206 410 aa1.5□□□□□ -2.17
AFB1YLR040C YIA6P40556 373 aa1.5□□□□□ -2.17
AFB1YLR040C DAN1P47178 298 aa1.5□□□□□ -2.17
AFB1YLR040C PNC1P53184 216 aaKnown RBP1.5□□□□□ -2.17
AFB1YLR040C PEX31P53203 462 aa1.5□□□□□ -2.17
AFB1YLR040C CAB4P53332 305 aa1.5□□□□□ -2.17
AFB1YLR040C CDC14Q00684 551 aa1.5□□□□□ -2.17
AFB1YLR040C MYO5Q04439 1219 aaKnown RBP1.5□□□□□ -2.17
AFB1YLR040C GPN3Q06543 272 aa1.5□□□□□ -2.17
AFB1YLR040C BER1Q06688 274 aaKnown RBP1.5□□□□□ -2.17
AFB1YLR040C ISD11Q6Q560 94 aa1.5□□□□□ -2.17
AFB1YLR040C YEL009C-AA0A023PZF2 135 aa1.49□□□□□ -2.17
AFB1YLR040C TDH1P00360 332 aaKnown RBP1.49□□□□□ -2.17
AFB1YLR040C RPS3P05750 240 aaKnown RBP1.49□□□□□ -2.17
AFB1YLR040C COS2P0CX12 379 aa1.49□□□□□ -2.17
AFB1YLR040C COS3P0CX13 379 aa1.49□□□□□ -2.17
AFB1YLR040C UGA1P17649 471 aa1.49□□□□□ -2.17
AFB1YLR040C TDA11P38854 504 aa1.49□□□□□ -2.17
AFB1YLR040C SER33P40510 469 aa1.49□□□□□ -2.17
AFB1YLR040C NBP1P52919 319 aaPredicted RBP1.49□□□□□ -2.17
AFB1YLR040C YGL185CP53100 379 aa1.49□□□□□ -2.17
AFB1YLR040C SLM2P53955 656 aa1.49□□□□□ -2.17
AFB1YLR040C SPO19Q03029 223 aa1.49□□□□□ -2.17
AFB1YLR040C SPO77Q06134 477 aa1.49□□□□□ -2.17
AFB1YLR040C YOR283WQ12040 230 aaKnown RBP1.49□□□□□ -2.17
AFB1YLR040C YMR316C-AI2HB70 103 aa1.48□□□□□ -2.17
AFB1YLR040C ILV1P00927 576 aaKnown RBP1.48□□□□□ -2.17
AFB1YLR040C FCY21P40039 528 aa1.48□□□□□ -2.17
AFB1YLR040C GCD14P46959 383 aaPredicted RBP1.48□□□□□ -2.17
AFB1YLR040C KEL2P50090 882 aa1.48□□□□□ -2.17
AFB1YLR040C CPD1P53314 239 aa1.48□□□□□ -2.17
AFB1YLR040C VBA1Q04301 562 aa1.48□□□□□ -2.17
AFB1YLR040C BCP1Q06338 283 aa1.48□□□□□ -2.17
AFB1YLR040C RPP0P05317 312 aaKnown RBP1.47□□□□□ -2.17
AFB1YLR040C FRS2P15625 503 aaKnown RBP1.47□□□□□ -2.17
AFB1YLR040C MEK1P24719 497 aaPredicted RBP1.47□□□□□ -2.17
AFB1YLR040C YHI9P38765 294 aa1.47□□□□□ -2.17
AFB1YLR040C GON7P46984 123 aa1.47□□□□□ -2.17
AFB1YLR040C MND1P53102 219 aa1.47□□□□□ -2.17
AFB1YLR040C COS6P53344 381 aa1.47□□□□□ -2.17
AFB1YLR040C TY3A-GQ12173 290 aa1.47□□□□□ -2.17
AFB1YLR040C TY3A-IQ99219 290 aa1.47□□□□□ -2.17
AFB1YLR040C YAL064W-BO13512 126 aa1.46□□□□□ -2.18
AFB1YLR040C CAM1P29547 415 aaKnown RBP1.46□□□□□ -2.18
AFB1YLR040C GDH2P33327 1092 aaKnown RBP1.46□□□□□ -2.18
AFB1YLR040C NRG2P38082 220 aa1.46□□□□□ -2.18
AFB1YLR040C COG3P40094 801 aa1.46□□□□□ -2.18
AFB1YLR040C YMR114CQ04471 368 aaKnown RBP1.46□□□□□ -2.18
AFB1YLR040C ERV41Q04651 352 aa1.46□□□□□ -2.18
AFB1YLR040C DCR2Q05924 578 aa1.46□□□□□ -2.18
AFB1YLR040C SFH1Q06168 426 aa1.46□□□□□ -2.18
AFB1YLR040C YPL247CQ12523 523 aa1.46□□□□□ -2.18
AFB1YLR040C RPC40P07703 335 aaKnown RBP1.45□□□□□ -2.18
AFB1YLR040C ICL1P28240 557 aaPredicted RBP1.45□□□□□ -2.18
AFB1YLR040C NIF3P53081 288 aa1.45□□□□□ -2.18
AFB1YLR040C MDM34P53083 459 aa1.45□□□□□ -2.18
AFB1YLR040C YNL260CP53846 198 aa1.45□□□□□ -2.18
AFB1YLR040C SEC10Q06245 871 aa1.45□□□□□ -2.18
AFB1YLR040C YHR086W-AQ3E746 53 aa1.45□□□□□ -2.18
AFB1YLR040C RPL4AP10664 362 aaKnown RBP1.44□□□□□ -2.18
AFB1YLR040C SCO1P23833 295 aa1.44□□□□□ -2.18
AFB1YLR040C DPB2P24482 689 aaPredicted RBP1.44□□□□□ -2.18
AFB1YLR040C POF1P25576 258 aa1.44□□□□□ -2.18
AFB1YLR040C BMH1P29311 267 aaKnown RBP1.44□□□□□ -2.18
AFB1YLR040C GRE3P38715 327 aaKnown RBP RIP-Chip data1.44□□□□□ -2.18not detected
AFB1YLR040C YHL049CP38722 271 aa1.44□□□□□ -2.18
AFB1YLR040C YHR045WP38775 560 aa1.44□□□□□ -2.18
AFB1YLR040C YJL028WP47062 111 aa1.44□□□□□ -2.18
AFB1YLR040C YJL016WP47072 561 aa1.44□□□□□ -2.18
AFB1YLR040C BAT2P47176 376 aaKnown RBP1.44□□□□□ -2.18
AFB1YLR040C RPL4BP49626 362 aaKnown RBP1.44□□□□□ -2.18
AFB1YLR040C NBP35P52920 328 aa1.44□□□□□ -2.18
AFB1YLR040C LSB1P53281 241 aa1.44□□□□□ -2.18
AFB1YLR040C SWS2P53937 143 aa1.44□□□□□ -2.18
AFB1YLR040C ATC1Q04005 294 aa1.44□□□□□ -2.18
AFB1YLR040C ARV1Q06541 321 aa1.44□□□□□ -2.18
AFB1YLR040C SMT3Q12306 101 aaKnown RBP1.44□□□□□ -2.18
AFB1YLR040C GEP5Q12393 293 aa1.44□□□□□ -2.18
AFB1YLR040C AI5_BETAQ9ZZX0 354 aa1.44□□□□□ -2.18
AFB1YLR040C YSR3P23501 404 aa1.43□□□□□ -2.18
AFB1YLR040C PPH21P23594 369 aa1.43□□□□□ -2.18
AFB1YLR040C NPT1P39683 429 aaKnown RBP1.43□□□□□ -2.18
AFB1YLR040C MRPL49P40858 161 aaPredicted RBP1.43□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 73.7 ms