RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C CYC2P38909 366 aa1.76□□□□□ -2.13
RTT101YJL047C HEM14P40012 539 aa1.76□□□□□ -2.13
RTT101YJL047C YIL029CP40538 142 aa1.76□□□□□ -2.13
RTT101YJL047C GUF1P46943 645 aa1.76□□□□□ -2.13
RTT101YJL047C IKS1P47042 667 aa1.76□□□□□ -2.13
RTT101YJL047C YJL016WP47072 561 aa1.76□□□□□ -2.13
RTT101YJL047C ECL1P48235 211 aa1.76□□□□□ -2.13
RTT101YJL047C NBP35P52920 328 aa1.76□□□□□ -2.13
RTT101YJL047C SPC24Q04477 213 aa1.76□□□□□ -2.13
RTT101YJL047C YMR315WQ04869 349 aaKnown RBP1.76□□□□□ -2.13
RTT101YJL047C YPR098CQ06089 161 aa1.76□□□□□ -2.13
RTT101YJL047C YET3Q07451 203 aa1.76□□□□□ -2.13
RTT101YJL047C HEM25Q07534 307 aa1.76□□□□□ -2.13
RTT101YJL047C NSL1Q12143 216 aa1.76□□□□□ -2.13
RTT101YJL047C RRP42Q12277 265 aaPredicted RBP1.76□□□□□ -2.13
RTT101YJL047C SNU23Q12368 194 aaPredicted RBP1.76□□□□□ -2.13
RTT101YJL047C EMP46Q12396 444 aa1.76□□□□□ -2.13
RTT101YJL047C AGC1Q12482 902 aa1.76□□□□□ -2.13
RTT101YJL047C FOL3Q12676 427 aaPredicted RBP1.76□□□□□ -2.13
RTT101YJL047C CCH1P50077 2039 aa1.75□□□□□ -2.13
RTT101YJL047C SPT3P06844 337 aa1.75□□□□□ -2.13
RTT101YJL047C VPH2P32341 215 aa1.75□□□□□ -2.13
RTT101YJL047C YNL320WP42840 284 aa1.75□□□□□ -2.13
RTT101YJL047C YFH7P43591 353 aa1.75□□□□□ -2.13
RTT101YJL047C MDV1P47025 714 aa1.75□□□□□ -2.13
RTT101YJL047C NSA1P53136 463 aaPredicted RBP1.75□□□□□ -2.13
RTT101YJL047C YGR042WP53227 271 aa1.75□□□□□ -2.13
RTT101YJL047C TPC1P53257 314 aa1.75□□□□□ -2.13
RTT101YJL047C YNL234WP53857 426 aa1.75□□□□□ -2.13
RTT101YJL047C TDA7P53882 636 aaPredicted RBP1.75□□□□□ -2.13
RTT101YJL047C SUR7P54003 302 aa1.75□□□□□ -2.13
RTT101YJL047C UTP15Q04305 513 aaKnown RBP1.75□□□□□ -2.13
RTT101YJL047C GMC1Q04399 608 aa1.75□□□□□ -2.13
RTT101YJL047C YLR446WQ06204 433 aa1.75□□□□□ -2.13
RTT101YJL047C YPR127WQ06494 345 aa1.75□□□□□ -2.13
RTT101YJL047C RRS1Q08746 203 aaKnown RBP1.75□□□□□ -2.13
RTT101YJL047C SNX3Q08826 162 aaKnown RBP1.75□□□□□ -2.13
RTT101YJL047C TPO4Q12256 659 aa1.75□□□□□ -2.13
RTT101YJL047C MCT1Q12283 360 aa1.75□□□□□ -2.13
RTT101YJL047C IFM1P25038 676 aa1.75□□□□□ -2.13
RTT101YJL047C ATG15P25641 520 aa1.75□□□□□ -2.13
RTT101YJL047C INO2P26798 304 aa1.75□□□□□ -2.13
RTT101YJL047C SIP2P34164 415 aaKnown RBP1.75□□□□□ -2.13
RTT101YJL047C CAF4P36130 643 aa1.75□□□□□ -2.13
RTT101YJL047C DRE2P36152 348 aa1.75□□□□□ -2.13
RTT101YJL047C MRPL3P36516 390 aa1.75□□□□□ -2.13
RTT101YJL047C RCK1P38622 512 aa1.75□□□□□ -2.13
RTT101YJL047C WSC4P38739 605 aa1.75□□□□□ -2.13
RTT101YJL047C YHR127WP38833 243 aaKnown RBP1.75□□□□□ -2.13
RTT101YJL047C EDC3P39998 551 aaKnown RBP1.75□□□□□ -2.13
RTT101YJL047C KRE29P40026 464 aa1.75□□□□□ -2.13
RTT101YJL047C COS4P43542 379 aa1.75□□□□□ -2.13
RTT101YJL047C IRC18P47056 224 aa1.75□□□□□ -2.13
RTT101YJL047C YJR111CP47148 283 aaKnown RBP1.75□□□□□ -2.13
RTT101YJL047C BRR6P53062 197 aa1.75□□□□□ -2.13
RTT101YJL047C YGL204CP53089 101 aa1.75□□□□□ -2.13
RTT101YJL047C PDR17P53844 350 aa1.75□□□□□ -2.13
RTT101YJL047C TPS1Q00764 495 aaKnown RBP1.75□□□□□ -2.13
RTT101YJL047C NUP49Q02199 472 aa1.75□□□□□ -2.13
RTT101YJL047C YLR053CQ12026 108 aa1.75□□□□□ -2.13
RTT101YJL047C YOR283WQ12040 230 aaKnown RBP1.75□□□□□ -2.13
RTT101YJL047C YDR018CQ12185 396 aa1.75□□□□□ -2.13
RTT101YJL047C MRX4Q12467 430 aa1.75□□□□□ -2.13
RTT101YJL047C MET2P08465 486 aa1.74□□□□□ -2.13
RTT101YJL047C RPS28BP0C0X0 67 aaKnown RBP1.74□□□□□ -2.13
RTT101YJL047C RPL42AP0CX27 106 aaKnown RBP1.74□□□□□ -2.13
RTT101YJL047C RPL42BP0CX28 106 aaKnown RBP1.74□□□□□ -2.13
RTT101YJL047C PET54P10834 293 aa1.74□□□□□ -2.13
RTT101YJL047C GRX2P17695 143 aaKnown RBP1.74□□□□□ -2.13
RTT101YJL047C OAC1P32332 324 aa1.74□□□□□ -2.13
RTT101YJL047C GPX1P36014 167 aa1.74□□□□□ -2.13
RTT101YJL047C ANR2P36090 516 aaPredicted RBP1.74□□□□□ -2.13
RTT101YJL047C MED8P38304 223 aa1.74□□□□□ -2.13
RTT101YJL047C SHC1P39000 512 aa1.74□□□□□ -2.13
RTT101YJL047C PEX22P39718 180 aa1.74□□□□□ -2.13
RTT101YJL047C OST1P41543 476 aaKnown RBP1.74□□□□□ -2.13
RTT101YJL047C FMP32P43557 207 aa1.74□□□□□ -2.13
RTT101YJL047C CPR7P47103 393 aa1.74□□□□□ -2.13
RTT101YJL047C VPS25P47142 202 aa1.74□□□□□ -2.13
RTT101YJL047C ATP23P53722 227 aa1.74□□□□□ -2.13
RTT101YJL047C PIR3Q03180 325 aa1.74□□□□□ -2.13
RTT101YJL047C TDA1Q03533 586 aa1.74□□□□□ -2.13
RTT101YJL047C ARO80Q04052 950 aa1.74□□□□□ -2.13
RTT101YJL047C GAS2Q06135 555 aa1.74□□□□□ -2.13
RTT101YJL047C MRX9Q07349 420 aaKnown RBP1.74□□□□□ -2.13
RTT101YJL047C MIM1Q08176 113 aa1.74□□□□□ -2.13
RTT101YJL047C RSA1Q08932 381 aa1.74□□□□□ -2.13
RTT101YJL047C RFM1Q12192 310 aa1.74□□□□□ -2.13
RTT101YJL047C RPS28AQ3E7X9 67 aaPredicted RBP1.74□□□□□ -2.13
RTT101YJL047C COX5AP00424 153 aa1.74□□□□□ -2.13
RTT101YJL047C CDC28P00546 298 aaKnown RBP1.74□□□□□ -2.13
RTT101YJL047C RPL23AP0CX41 137 aaKnown RBP1.74□□□□□ -2.13
RTT101YJL047C RPL23BP0CX42 137 aaKnown RBP1.74□□□□□ -2.13
RTT101YJL047C YCR023CP25351 611 aa1.74□□□□□ -2.13
RTT101YJL047C YCR025CP25352 136 aa1.74□□□□□ -2.13
RTT101YJL047C RPL16AP26784 199 aaKnown RBP1.74□□□□□ -2.13
RTT101YJL047C TIP20P33891 701 aa1.74□□□□□ -2.13
RTT101YJL047C SSH1P38353 490 aaKnown RBP1.74□□□□□ -2.13
RTT101YJL047C MDM31P38880 579 aa1.74□□□□□ -2.13
RTT101YJL047C BDH1P39714 382 aa1.74□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms