RNA–Protein interactions for RNA: YIL084C

SDS3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene SDS3, Length 984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS3YIL084C ADE1P27616 306 aa3.29□□□□□ -1.88
SDS3YIL084C ADH5P38113 351 aaKnown RBP3.29□□□□□ -1.88
SDS3YIL084C SCC4P40090 624 aa3.29□□□□□ -1.88
SDS3YIL084C YMR134WP40207 237 aa3.29□□□□□ -1.88
SDS3YIL084C ABM1P47146 123 aa3.29□□□□□ -1.88
SDS3YIL084C KAP114P53067 1004 aa3.29□□□□□ -1.88
SDS3YIL084C YGR015CP53208 328 aa3.29□□□□□ -1.88
SDS3YIL084C CWC22P53333 577 aaKnown RBP3.29□□□□□ -1.88
SDS3YIL084C REX2P54964 269 aaKnown RBP3.29□□□□□ -1.88
SDS3YIL084C SKI8Q02793 397 aaPredicted RBP3.29□□□□□ -1.88
SDS3YIL084C YDL199CQ12407 687 aa3.29□□□□□ -1.88
SDS3YIL084C DYN1P36022 4092 aa3.29□□□□□ -1.88
SDS3YIL084C PHO13P19881 312 aa3.28□□□□□ -1.88
SDS3YIL084C MGT1P26188 188 aa3.28□□□□□ -1.88
SDS3YIL084C TPS2P31688 896 aaKnown RBP3.28□□□□□ -1.88
SDS3YIL084C SMI1P32566 505 aa3.28□□□□□ -1.88
SDS3YIL084C SSE1P32589 693 aaKnown RBP3.28□□□□□ -1.88
SDS3YIL084C SUI1P32911 108 aaKnown RBP3.28□□□□□ -1.88
SDS3YIL084C GRE3P38715 327 aaKnown RBP RIP-Chip data3.28□□□□□ -1.88not detected
SDS3YIL084C LSM12P38828 187 aaKnown RBP3.28□□□□□ -1.88
SDS3YIL084C END3P39013 349 aa3.28□□□□□ -1.88
SDS3YIL084C ECO1P43605 281 aa3.28□□□□□ -1.88
SDS3YIL084C YJR149WP47177 404 aa3.28□□□□□ -1.88
SDS3YIL084C RPN14P53196 417 aa3.28□□□□□ -1.88
SDS3YIL084C DBP9Q06218 594 aaKnown RBP3.28□□□□□ -1.88
SDS3YIL084C RRP40Q08285 240 aaKnown RBP3.28□□□□□ -1.88
SDS3YIL084C YPR011CQ12251 326 aa3.28□□□□□ -1.88
SDS3YIL084C FSH3Q99369 266 aa3.28□□□□□ -1.88
SDS3YIL084C RPS18AP0CX55 146 aaKnown RBP3.27□□□□□ -1.89
SDS3YIL084C RPS18BP0CX56 146 aaPredicted RBP3.27□□□□□ -1.89
SDS3YIL084C DBR1P24309 405 aaKnown RBP3.27□□□□□ -1.89
SDS3YIL084C RPL16AP26784 199 aaKnown RBP3.27□□□□□ -1.89
SDS3YIL084C IES6P32617 166 aa3.27□□□□□ -1.89
SDS3YIL084C YHI9P38765 294 aa3.27□□□□□ -1.89
SDS3YIL084C SEH1P53011 349 aaKnown RBP3.27□□□□□ -1.89
SDS3YIL084C APC4Q04601 652 aa3.27□□□□□ -1.89
SDS3YIL084C YMR310CQ04867 317 aaPredicted RBP3.27□□□□□ -1.89
SDS3YIL084C STE7P06784 515 aa3.26□□□□□ -1.89
SDS3YIL084C ERG9P29704 444 aa3.26□□□□□ -1.89
SDS3YIL084C URA10P30402 227 aa3.26□□□□□ -1.89
SDS3YIL084C DEP1P31385 405 aa3.26□□□□□ -1.89
SDS3YIL084C HMX1P32339 317 aa3.26□□□□□ -1.89
SDS3YIL084C GGC1P38988 300 aa3.26□□□□□ -1.89
SDS3YIL084C NPT1P39683 429 aaKnown RBP3.26□□□□□ -1.89
SDS3YIL084C ICE2P40499 491 aa3.26□□□□□ -1.89
SDS3YIL084C APQ12P40532 138 aa3.26□□□□□ -1.89
SDS3YIL084C YRB1P41920 201 aaKnown RBP3.26□□□□□ -1.89
SDS3YIL084C MDM34P53083 459 aa3.26□□□□□ -1.89
SDS3YIL084C YGR067CP53243 804 aa3.26□□□□□ -1.89
SDS3YIL084C YNL260CP53846 198 aa3.26□□□□□ -1.89
SDS3YIL084C UTP6Q02354 440 aaKnown RBP3.26□□□□□ -1.89
SDS3YIL084C GOT1Q03554 138 aa3.26□□□□□ -1.89
SDS3YIL084C MIX14Q04341 121 aa3.26□□□□□ -1.89
SDS3YIL084C YMR114CQ04471 368 aaKnown RBP3.26□□□□□ -1.89
SDS3YIL084C YPR174CQ06616 221 aaPredicted RBP3.26□□□□□ -1.89
SDS3YIL084C GAT3Q07928 141 aa3.26□□□□□ -1.89
SDS3YIL084C ZRC1P20107 442 aa3.25□□□□□ -1.89
SDS3YIL084C GIT1P25346 518 aa3.25□□□□□ -1.89
SDS3YIL084C TRX3P25372 127 aa3.25□□□□□ -1.89
SDS3YIL084C SRB4P32569 687 aa3.25□□□□□ -1.89
SDS3YIL084C PTM1P32857 523 aa3.25□□□□□ -1.89
SDS3YIL084C VAM7P32912 316 aa3.25□□□□□ -1.89
SDS3YIL084C UBC6P33296 250 aaPredicted RBP3.25□□□□□ -1.89
SDS3YIL084C RCK2P38623 610 aa3.25□□□□□ -1.89
SDS3YIL084C TCD1P38756 429 aa3.25□□□□□ -1.89
SDS3YIL084C BOL2P53082 120 aa3.25□□□□□ -1.89
SDS3YIL084C MSC3Q05812 728 aa3.25□□□□□ -1.89
SDS3YIL084C DAS2Q12084 232 aa3.25□□□□□ -1.89
SDS3YIL084C YPL245WQ12179 454 aaKnown RBP3.25□□□□□ -1.89
SDS3YIL084C YPR064WQ12492 139 aa3.25□□□□□ -1.89
SDS3YIL084C SFG1Q12507 346 aa3.25□□□□□ -1.89
SDS3YIL084C URA2P07259 2214 aaKnown RBP3.24□□□□□ -1.89
SDS3YIL084C HEM4P06174 275 aa3.24□□□□□ -1.89
SDS3YIL084C CMD1P06787 147 aaKnown RBP3.24□□□□□ -1.89
SDS3YIL084C PRB1P09232 635 aa3.24□□□□□ -1.89
SDS3YIL084C YSF3P0C074 85 aaPredicted RBP3.24□□□□□ -1.89
SDS3YIL084C GPI12P23797 304 aa3.24□□□□□ -1.89
SDS3YIL084C SEC14P24280 304 aaKnown RBP3.24□□□□□ -1.89
SDS3YIL084C STP22P25604 385 aa3.24□□□□□ -1.89
SDS3YIL084C GPI18P38211 433 aa3.24□□□□□ -1.89
SDS3YIL084C CAJ1P39101 391 aa3.24□□□□□ -1.89
SDS3YIL084C PRP39P39682 629 aaKnown RBP3.24□□□□□ -1.89
SDS3YIL084C CIN2P46670 268 aa3.24□□□□□ -1.89
SDS3YIL084C YJR141WP47172 347 aaPredicted RBP3.24□□□□□ -1.89
SDS3YIL084C PDR16P53860 351 aaKnown RBP3.24□□□□□ -1.89
SDS3YIL084C CGI121Q03705 181 aaKnown RBP3.24□□□□□ -1.89
SDS3YIL084C TSA2Q04120 196 aa3.24□□□□□ -1.89
SDS3YIL084C CDC123Q05791 360 aa3.24□□□□□ -1.89
SDS3YIL084C FAR10Q06001 478 aa3.24□□□□□ -1.89
SDS3YIL084C YDL109CQ12103 647 aa3.24□□□□□ -1.89
SDS3YIL084C RAD1P06777 1100 aa3.23□□□□□ -1.89
SDS3YIL084C STE3P06783 470 aa3.23□□□□□ -1.89
SDS3YIL084C YFR010W-AP0C5N0 62 aa3.23□□□□□ -1.89
SDS3YIL084C TAL1P15019 335 aaKnown RBP3.23□□□□□ -1.89
SDS3YIL084C LDS1P31379 325 aa3.23□□□□□ -1.89
SDS3YIL084C YKR015CP36111 568 aa3.23□□□□□ -1.89
SDS3YIL084C MAL32P38158 584 aa3.23□□□□□ -1.89
SDS3YIL084C POP4P38336 279 aa3.23□□□□□ -1.89
SDS3YIL084C IGD1P43598 195 aa3.23□□□□□ -1.89
SDS3YIL084C RPE1P46969 238 aa3.23□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms