RNA–Protein interactions for RNA: YDR392W

SPT3, Transcript of Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, yeastyeast

Gene SPT3, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT3YDR392W RIM1P32445 135 aaKnown RBP3.53□□□□□ -1.84
SPT3YDR392W HXT1P32465 570 aa3.53□□□□□ -1.84
SPT3YDR392W GLC7P32598 312 aaKnown RBP3.53□□□□□ -1.84
SPT3YDR392W YOX1P34161 385 aa3.53□□□□□ -1.84
SPT3YDR392W SRL3P36167 246 aa3.53□□□□□ -1.84
SPT3YDR392W BMT2P38278 337 aa3.53□□□□□ -1.84
SPT3YDR392W CCT2P39076 527 aaKnown RBP3.53□□□□□ -1.84
SPT3YDR392W PDS1P40316 373 aaPredicted RBP3.53□□□□□ -1.84
SPT3YDR392W STB1P42845 420 aa3.53□□□□□ -1.84
SPT3YDR392W DCP2P53550 970 aaKnown RBP3.53□□□□□ -1.84
SPT3YDR392W YKR005CQ02203 525 aa3.53□□□□□ -1.84
SPT3YDR392W UTP6Q02354 440 aaKnown RBP3.53□□□□□ -1.84
SPT3YDR392W YMR114CQ04471 368 aaKnown RBP3.53□□□□□ -1.84
SPT3YDR392W GMC2Q06201 188 aa3.53□□□□□ -1.84
SPT3YDR392W RTN2Q12443 393 aa3.53□□□□□ -1.84
SPT3YDR392W TDH1P00360 332 aaKnown RBP3.52□□□□□ -1.85
SPT3YDR392W RPS16AP0CX51 143 aaKnown RBP3.52□□□□□ -1.85
SPT3YDR392W RPS16BP0CX52 143 aaKnown RBP3.52□□□□□ -1.85
SPT3YDR392W GCN3P14741 305 aa3.52□□□□□ -1.85
SPT3YDR392W DPB2P24482 689 aaPredicted RBP3.52□□□□□ -1.85
SPT3YDR392W VPH2P32341 215 aa3.52□□□□□ -1.85
SPT3YDR392W SIP1P32578 815 aa3.52□□□□□ -1.85
SPT3YDR392W YBL055CP34220 418 aaPredicted RBP3.52□□□□□ -1.85
SPT3YDR392W NUP120P35729 1037 aa3.52□□□□□ -1.85
SPT3YDR392W SWD1P39706 426 aa3.52□□□□□ -1.85
SPT3YDR392W SYG1P40528 902 aa3.52□□□□□ -1.85
SPT3YDR392W TMA22P47089 198 aaPredicted RBP3.52□□□□□ -1.85
SPT3YDR392W UBP8P50102 471 aa3.52□□□□□ -1.85
SPT3YDR392W COS6P53344 381 aa3.52□□□□□ -1.85
SPT3YDR392W FIN1Q03898 291 aa3.52□□□□□ -1.85
SPT3YDR392W TRI1Q05024 226 aa3.52□□□□□ -1.85
SPT3YDR392W SEC10Q06245 871 aa3.52□□□□□ -1.85
SPT3YDR392W FRE6Q12473 712 aa3.52□□□□□ -1.85
SPT3YDR392W YCL012CQ8J0M4 134 aa3.52□□□□□ -1.85
SPT3YDR392W OPI3P05375 206 aa3.51□□□□□ -1.85
SPT3YDR392W RPB4P20433 221 aaPredicted RBP3.51□□□□□ -1.85
SPT3YDR392W SAG1P20840 650 aa3.51□□□□□ -1.85
SPT3YDR392W YCR016WP25617 290 aaKnown RBP3.51□□□□□ -1.85
SPT3YDR392W MRE11P32829 692 aa3.51□□□□□ -1.85
SPT3YDR392W LAS1P36146 502 aaPredicted RBP3.51□□□□□ -1.85
SPT3YDR392W TRS20P38334 175 aa3.51□□□□□ -1.85
SPT3YDR392W YLF2P38746 405 aa3.51□□□□□ -1.85
SPT3YDR392W GCD14P46959 383 aaPredicted RBP3.51□□□□□ -1.85
SPT3YDR392W VMA10P48836 114 aaKnown RBP3.51□□□□□ -1.85
SPT3YDR392W ORM1P53224 222 aa3.51□□□□□ -1.85
SPT3YDR392W URC2Q04411 772 aa3.51□□□□□ -1.85
SPT3YDR392W YLR177WQ06251 628 aa3.51□□□□□ -1.85
SPT3YDR392W ATG26Q06321 1198 aa3.51□□□□□ -1.85
SPT3YDR392W CRN1Q06440 651 aa3.51□□□□□ -1.85
SPT3YDR392W POS5Q06892 414 aa3.51□□□□□ -1.85
SPT3YDR392W AIM6Q07716 390 aa3.51□□□□□ -1.85
SPT3YDR392W BRX1Q08235 291 aaKnown RBP3.51□□□□□ -1.85
SPT3YDR392W MCP1Q12106 302 aa3.51□□□□□ -1.85
SPT3YDR392W RPL24AP04449 155 aaKnown RBP3.5□□□□□ -1.85
SPT3YDR392W CUP2P15315 225 aa3.5□□□□□ -1.85
SPT3YDR392W MRPL25P23369 157 aa3.5□□□□□ -1.85
SPT3YDR392W BUD5P25300 642 aaPredicted RBP3.5□□□□□ -1.85
SPT3YDR392W GIT1P25346 518 aa3.5□□□□□ -1.85
SPT3YDR392W PTM1P32857 523 aa3.5□□□□□ -1.85
SPT3YDR392W YET1P35723 206 aa3.5□□□□□ -1.85
SPT3YDR392W VMA22P38784 181 aa3.5□□□□□ -1.85
SPT3YDR392W SCC4P40090 624 aa3.5□□□□□ -1.85
SPT3YDR392W YDR274CP87283 123 aa3.5□□□□□ -1.85
SPT3YDR392W TMA20P89886 181 aaPredicted RBP3.5□□□□□ -1.85
SPT3YDR392W ATO3Q12359 275 aa3.5□□□□□ -1.85
SPT3YDR392W NOT5Q12514 560 aaPredicted RBP3.5□□□□□ -1.85
SPT3YDR392W MHT1Q12525 324 aa3.5□□□□□ -1.85
SPT3YDR392W SGA1P08019 549 aa3.49□□□□□ -1.85
SPT3YDR392W YML002WP0CF17 737 aa3.49□□□□□ -1.85
SPT3YDR392W IMA3P0CW40 589 aa3.49□□□□□ -1.85
SPT3YDR392W IMA4P0CW41 589 aa3.49□□□□□ -1.85
SPT3YDR392W ADH4P10127 382 aa3.49□□□□□ -1.85
SPT3YDR392W PET122P10355 254 aa3.49□□□□□ -1.85
SPT3YDR392W CDC23P16522 626 aa3.49□□□□□ -1.85
SPT3YDR392W TRX2P22803 104 aaKnown RBP3.49□□□□□ -1.85
SPT3YDR392W YKR015CP36111 568 aa3.49□□□□□ -1.85
SPT3YDR392W PEX32P38292 413 aa3.49□□□□□ -1.85
SPT3YDR392W SBE22P38814 852 aa3.49□□□□□ -1.85
SPT3YDR392W AIM2P39721 246 aa3.49□□□□□ -1.85
SPT3YDR392W YFL012WP43580 148 aa3.49□□□□□ -1.85
SPT3YDR392W GTO1P48239 356 aa3.49□□□□□ -1.85
SPT3YDR392W YGR016WP53209 190 aa3.49□□□□□ -1.85
SPT3YDR392W CAC2Q04199 468 aa3.49□□□□□ -1.85
SPT3YDR392W VTI1Q04338 217 aa3.49□□□□□ -1.85
SPT3YDR392W CDC123Q05791 360 aa3.49□□□□□ -1.85
SPT3YDR392W IMA2Q08295 589 aa3.49□□□□□ -1.85
SPT3YDR392W RKM1Q08961 583 aaPredicted RBP3.49□□□□□ -1.85
SPT3YDR392W YLR112WQ12130 139 aa3.49□□□□□ -1.85
SPT3YDR392W RIO1Q12196 484 aaKnown RBP3.49□□□□□ -1.85
SPT3YDR392W YGR161W-CQ3E744 92 aa3.49□□□□□ -1.85
SPT3YDR392W LSO2Q3E772 92 aaKnown RBP3.49□□□□□ -1.85
SPT3YDR392W YBR255C-AQ3E776 120 aa3.49□□□□□ -1.85
SPT3YDR392W CMD1P06787 147 aaKnown RBP3.48□□□□□ -1.85
SPT3YDR392W SEN2P16658 377 aa3.48□□□□□ -1.85
SPT3YDR392W SPO12P17123 173 aa3.48□□□□□ -1.85
SPT3YDR392W RAD57P25301 460 aa3.48□□□□□ -1.85
SPT3YDR392W MGT1P26188 188 aa3.48□□□□□ -1.85
SPT3YDR392W URA10P30402 227 aa3.48□□□□□ -1.85
SPT3YDR392W VMA8P32610 256 aaKnown RBP3.48□□□□□ -1.85
SPT3YDR392W PTC1P35182 281 aa3.48□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 34.6 ms