RNA–Protein interactions for RNA: YDR077W

SED1, Transcript of Major stress-induced structural GPI-cell wall glycoprotein, yeastyeast

Gene SED1, Length 1,017 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED1YDR077W CHS7P38843 316 aa8.46□□□□□ -1.06
SED1YDR077W SMB1P40018 196 aaKnown RBP8.46□□□□□ -1.06
SED1YDR077W SLZ1P40167 298 aa8.46□□□□□ -1.06
SED1YDR077W IKS1P47042 667 aa8.46□□□□□ -1.06
SED1YDR077W RMD9P53140 646 aaKnown RBP8.46□□□□□ -1.06
SED1YDR077W HOL1P53389 586 aa8.46□□□□□ -1.06
SED1YDR077W SAM50P53969 484 aa8.46□□□□□ -1.06
SED1YDR077W YLR152CP54072 576 aa8.46□□□□□ -1.06
SED1YDR077W ASR1Q06834 288 aa8.46□□□□□ -1.06
SED1YDR077W GRE1Q08969 168 aa8.46□□□□□ -1.06
SED1YDR077W TY1A-BLQ12266 440 aa8.46□□□□□ -1.06
SED1YDR077W RRI1Q12468 440 aa8.46□□□□□ -1.06
SED1YDR077W PET54P10834 293 aa8.45□□□□□ -1.06
SED1YDR077W CTA1P15202 515 aa8.45□□□□□ -1.06
SED1YDR077W CNE1P27825 502 aa8.45□□□□□ -1.06
SED1YDR077W ATS1P31386 333 aa8.45□□□□□ -1.06
SED1YDR077W AIM36Q03798 255 aa8.45□□□□□ -1.06
SED1YDR077W YDR102CQ03864 110 aa8.45□□□□□ -1.06
SED1YDR077W RVB1Q03940 463 aaKnown RBP8.45□□□□□ -1.06
SED1YDR077W AGE1Q04412 482 aa8.45□□□□□ -1.06
SED1YDR077W MCH4Q08268 501 aa8.45□□□□□ -1.06
SED1YDR077W YLR125WQ12138 136 aa8.45□□□□□ -1.06
SED1YDR077W YHR214C-EQ8TGK0 99 aa8.45□□□□□ -1.06
SED1YDR077W SCEIP03882 235 aa8.44□□□□□ -1.06
SED1YDR077W SEC62P21825 274 aa8.44□□□□□ -1.06
SED1YDR077W MDH2P22133 377 aa8.44□□□□□ -1.06
SED1YDR077W NFS1P25374 497 aa8.44□□□□□ -1.06
SED1YDR077W DLS1P40366 167 aa8.44□□□□□ -1.06
SED1YDR077W TIR3P40552 269 aa8.44□□□□□ -1.06
SED1YDR077W AAD14P42884 376 aa8.44□□□□□ -1.06
SED1YDR077W MSY1P48527 492 aa8.44□□□□□ -1.06
SED1YDR077W PBP1P53297 722 aaKnown RBP8.44□□□□□ -1.06
SED1YDR077W YPR196WQ06595 470 aa8.44□□□□□ -1.06
SED1YDR077W INP53Q12271 1107 aa8.44□□□□□ -1.06
SED1YDR077W SPS2P08459 502 aa8.43□□□□□ -1.06
SED1YDR077W GCD1P09032 578 aaPredicted RBP8.43□□□□□ -1.06
SED1YDR077W MATALPHA1P0CY06 175 aa8.43□□□□□ -1.06
SED1YDR077W HMLALPHA1P0CY07 175 aa8.43□□□□□ -1.06
SED1YDR077W ERG4P25340 473 aa8.43□□□□□ -1.06
SED1YDR077W ACH1P32316 526 aa8.43□□□□□ -1.06
SED1YDR077W NAB2P32505 525 aaKnown RBP RIP-Chip data8.43□□□□□ -1.06not detected
SED1YDR077W MRPL3P36516 390 aa8.43□□□□□ -1.06
SED1YDR077W YHR122WP38829 231 aa8.43□□□□□ -1.06
SED1YDR077W MNN5P46982 586 aa8.43□□□□□ -1.06
SED1YDR077W AIM25P47140 327 aa8.43□□□□□ -1.06
SED1YDR077W DIE2P50076 525 aa8.43□□□□□ -1.06
SED1YDR077W VHT1P53241 593 aa8.43□□□□□ -1.06
SED1YDR077W SLI1P53304 468 aa8.43□□□□□ -1.06
SED1YDR077W ATG4P53867 494 aa8.43□□□□□ -1.06
SED1YDR077W YOL024WQ08172 172 aa8.43□□□□□ -1.06
SED1YDR077W ORT1Q12375 292 aa8.43□□□□□ -1.06
SED1YDR077W HTZ1Q12692 134 aaKnown RBP8.43□□□□□ -1.06
SED1YDR077W RPL6BP05739 176 aaKnown RBP8.42□□□□□ -1.06
SED1YDR077W NAM2P11325 894 aa8.42□□□□□ -1.06
SED1YDR077W RNP1P32385 249 aa8.42□□□□□ -1.06
SED1YDR077W FRM2P37261 193 aa8.42□□□□□ -1.06
SED1YDR077W SSH1P38353 490 aaKnown RBP8.42□□□□□ -1.06
SED1YDR077W SEC24P40482 926 aaKnown RBP8.42□□□□□ -1.06
SED1YDR077W CAT5P41735 233 aa8.42□□□□□ -1.06
SED1YDR077W SCW4P53334 386 aaKnown RBP8.42□□□□□ -1.06
SED1YDR077W AAH1P53909 347 aa8.42□□□□□ -1.06
SED1YDR077W MRPS16Q02608 121 aa8.42□□□□□ -1.06
SED1YDR077W CTF19Q02732 369 aa8.42□□□□□ -1.06
SED1YDR077W KAP120Q02932 1032 aa8.42□□□□□ -1.06
SED1YDR077W KEI1Q06346 221 aa8.42□□□□□ -1.06
SED1YDR077W YRM1Q12340 786 aa8.42□□□□□ -1.06
SED1YDR077W FLO9P39712 1322 aa8.41□□□□□ -1.06
SED1YDR077W KAE1P36132 386 aa8.41□□□□□ -1.06
SED1YDR077W BOL3P39724 118 aa8.41□□□□□ -1.06
SED1YDR077W UBX6P47049 396 aa8.41□□□□□ -1.06
SED1YDR077W DIG2Q03373 323 aaKnown RBP8.41□□□□□ -1.06
SED1YDR077W TGS1Q12052 315 aa8.41□□□□□ -1.06
SED1YDR077W Q0144Q9ZZW2 109 aa8.41□□□□□ -1.06
SED1YDR077W IRA1P18963 3092 aa8.4□□□□□ -1.06
SED1YDR077W CDC23P16522 626 aa8.4□□□□□ -1.06
SED1YDR077W SAR1P20606 190 aaKnown RBP8.4□□□□□ -1.06
SED1YDR077W RPB10P22139 70 aa8.4□□□□□ -1.06
SED1YDR077W ATG22P25568 528 aa8.4□□□□□ -1.06
SED1YDR077W DBF20P32328 564 aa8.4□□□□□ -1.06
SED1YDR077W PPQ1P32945 549 aa8.4□□□□□ -1.06
SED1YDR077W SNC2P33328 115 aa8.4□□□□□ -1.06
SED1YDR077W SOF1P33750 489 aaKnown RBP8.4□□□□□ -1.06
SED1YDR077W MKS1P34072 584 aa8.4□□□□□ -1.06
SED1YDR077W CLG1P35190 452 aa8.4□□□□□ -1.06
SED1YDR077W PUG1P40100 303 aa8.4□□□□□ -1.06
SED1YDR077W SYS1P41544 203 aa8.4□□□□□ -1.06
SED1YDR077W ERJ5P43613 295 aaPredicted RBP8.4□□□□□ -1.06
SED1YDR077W HSV2P50079 448 aaPredicted RBP8.4□□□□□ -1.06
SED1YDR077W YIP4P53093 235 aa8.4□□□□□ -1.06
SED1YDR077W GIM3P53900 129 aa8.4□□□□□ -1.06
SED1YDR077W NRK1P53915 240 aa8.4□□□□□ -1.06
SED1YDR077W UTP15Q04305 513 aaKnown RBP8.4□□□□□ -1.06
SED1YDR077W RAD52P06778 471 aaKnown RBP8.39□□□□□ -1.07
SED1YDR077W CBP6P07253 162 aaPredicted RBP8.39□□□□□ -1.07
SED1YDR077W CHO1P08456 276 aa8.39□□□□□ -1.07
SED1YDR077W CDC34P14682 295 aa8.39□□□□□ -1.07
SED1YDR077W YBR096WP38256 230 aa8.39□□□□□ -1.07
SED1YDR077W PRY1P47032 299 aa8.39□□□□□ -1.07
SED1YDR077W LOH1P47055 219 aa8.39□□□□□ -1.07
SED1YDR077W POP6P53218 158 aa8.39□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 28.7 ms