RNA–Protein interactions for RNA: YBR272C

HSM3, Transcript of Proteasome-interacting protein, yeast

Gene HSM3, Length 1,443 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HSM3	YBR272C	PRY2	P36110	329 aa		6.25	□□□□□ -1.41
HSM3	YBR272C	RIB1	P38066	345 aa		6.25	□□□□□ -1.41
HSM3	YBR272C	EHT1	P38295	451 aa		6.25	□□□□□ -1.41
HSM3	YBR272C	FMP52	P40008	231 aa		6.25	□□□□□ -1.41
HSM3	YBR272C	RRG9	P40156	214 aa		6.25	□□□□□ -1.41
HSM3	YBR272C	GTS1	P40956	396 aa		6.25	□□□□□ -1.41
HSM3	YBR272C	TAH11	P47112	604 aa		6.25	□□□□□ -1.41
HSM3	YBR272C	APS2	Q00381	147 aa		6.25	□□□□□ -1.41
HSM3	YBR272C	MRPS16	Q02608	121 aa		6.25	□□□□□ -1.41
HSM3	YBR272C	ATG21	Q02887	496 aa		6.25	□□□□□ -1.41
HSM3	YBR272C	YLR446W	Q06204	433 aa		6.25	□□□□□ -1.41
HSM3	YBR272C	ATG33	Q06485	197 aa		6.25	□□□□□ -1.41
HSM3	YBR272C	OPI10	Q08202	246 aa		6.25	□□□□□ -1.41
HSM3	YBR272C	TY1A-BL	Q12266	440 aa		6.25	□□□□□ -1.41
HSM3	YBR272C	TRM10	Q12400	293 aa		6.25	□□□□□ -1.41
HSM3	YBR272C	AIM45	Q12480	344 aa	Known RBP	6.25	□□□□□ -1.41
HSM3	YBR272C	COA6	Q3E846	104 aa		6.25	□□□□□ -1.41
HSM3	YBR272C	SPE1	P08432	466 aa		6.25	□□□□□ -1.41
HSM3	YBR272C	SAM2	P19358	384 aa	Known RBP	6.25	□□□□□ -1.41
HSM3	YBR272C	ERG6	P25087	383 aa	Known RBP	6.25	□□□□□ -1.41
HSM3	YBR272C	YCR015C	P25616	317 aa		6.25	□□□□□ -1.41
HSM3	YBR272C	CWP1	P28319	239 aa		6.25	□□□□□ -1.41
HSM3	YBR272C	SKG6	P32900	734 aa	Predicted RBP	6.25	□□□□□ -1.41
HSM3	YBR272C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	6.25	□□□□□ -1.41	not detected
HSM3	YBR272C	MMS21	P38632	267 aa		6.25	□□□□□ -1.41
HSM3	YBR272C	SHU2	P38957	223 aa		6.25	□□□□□ -1.41
HSM3	YBR272C	YEA6	P39953	335 aa		6.25	□□□□□ -1.41
HSM3	YBR272C	MAF1	P41910	395 aa		6.25	□□□□□ -1.41
HSM3	YBR272C	YFL064C	P43540	174 aa		6.25	□□□□□ -1.41
HSM3	YBR272C	PTR3	P43606	678 aa		6.25	□□□□□ -1.41
HSM3	YBR272C	TAX4	P47030	604 aa		6.25	□□□□□ -1.41
HSM3	YBR272C	FAA4	P47912	694 aa	Known RBP	6.25	□□□□□ -1.41
HSM3	YBR272C	MNN10	P50108	393 aa	Known RBP	6.25	□□□□□ -1.41
HSM3	YBR272C	YLR460C	P54007	376 aa		6.25	□□□□□ -1.41
HSM3	YBR272C	UBC7	Q02159	165 aa		6.25	□□□□□ -1.41
HSM3	YBR272C	CTK1	Q03957	528 aa	Known RBP	6.25	□□□□□ -1.41
HSM3	YBR272C	LRS4	Q04087	347 aa	Known RBP	6.25	□□□□□ -1.41
HSM3	YBR272C	YET2	Q04210	160 aa		6.25	□□□□□ -1.41
HSM3	YBR272C	THI20	Q08224	551 aa		6.25	□□□□□ -1.41
HSM3	YBR272C	ERP3	Q12403	225 aa		6.25	□□□□□ -1.41
HSM3	YBR272C	YOL159C-A	Q3E769	90 aa		6.25	□□□□□ -1.41
HSM3	YBR272C	YCL012C	Q8J0M4	134 aa		6.25	□□□□□ -1.41
HSM3	YBR272C	AAC1	P04710	309 aa		6.24	□□□□□ -1.41
HSM3	YBR272C	SGA1	P08019	549 aa		6.24	□□□□□ -1.41
HSM3	YBR272C	CPR2	P23285	205 aa		6.24	□□□□□ -1.41
HSM3	YBR272C	PET18	P25362	215 aa		6.24	□□□□□ -1.41
HSM3	YBR272C	PPZ1	P26570	692 aa		6.24	□□□□□ -1.41
HSM3	YBR272C	DRE2	P36152	348 aa		6.24	□□□□□ -1.41
HSM3	YBR272C	MRPL36	P36531	177 aa		6.24	□□□□□ -1.41
HSM3	YBR272C	CBP4	P37267	147 aa		6.24	□□□□□ -1.41
HSM3	YBR272C	PHO88	P38264	188 aa	Predicted RBP	6.24	□□□□□ -1.41
HSM3	YBR272C	YHL044W	P38727	235 aa		6.24	□□□□□ -1.41
HSM3	YBR272C	DOG2	P38773	246 aa		6.24	□□□□□ -1.41
HSM3	YBR272C	YER189W	P40104	122 aa		6.24	□□□□□ -1.41
HSM3	YBR272C	YMR144W	P40214	342 aa	Known RBP	6.24	□□□□□ -1.41
HSM3	YBR272C	ARG2	P40360	574 aa		6.24	□□□□□ -1.41
HSM3	YBR272C	YIL060W	P40519	144 aa		6.24	□□□□□ -1.41
HSM3	YBR272C	ERJ5	P43613	295 aa	Predicted RBP	6.24	□□□□□ -1.41
HSM3	YBR272C	YNL143C	P53908	130 aa		6.24	□□□□□ -1.41
HSM3	YBR272C	SMX3	P54999	86 aa	Predicted RBP	6.24	□□□□□ -1.41
HSM3	YBR272C	TIM8	P57744	87 aa		6.24	□□□□□ -1.41
HSM3	YBR272C	TMA23	Q03525	211 aa		6.24	□□□□□ -1.41
HSM3	YBR272C	PLB2	Q03674	706 aa		6.24	□□□□□ -1.41
HSM3	YBR272C	YML018C	Q03730	393 aa		6.24	□□□□□ -1.41
HSM3	YBR272C	TY1A-MR1	Q04215	440 aa		6.24	□□□□□ -1.41
HSM3	YBR272C	ECM22	Q05958	814 aa	Predicted RBP	6.24	□□□□□ -1.41
HSM3	YBR272C	ASR1	Q06834	288 aa		6.24	□□□□□ -1.41
HSM3	YBR272C	ALG6	Q12001	544 aa	Known RBP	6.24	□□□□□ -1.41
HSM3	YBR272C	RAD28	Q12021	506 aa		6.24	□□□□□ -1.41
HSM3	YBR272C	UPC2	Q12151	913 aa		6.24	□□□□□ -1.41
HSM3	YBR272C	USB1	Q12208	290 aa	Known RBP	6.24	□□□□□ -1.41
HSM3	YBR272C	YOL114C	Q12322	202 aa		6.24	□□□□□ -1.41
HSM3	YBR272C	RKM5	Q12367	367 aa		6.24	□□□□□ -1.41
HSM3	YBR272C	NBL1	Q3E7Y6	73 aa		6.24	□□□□□ -1.41
HSM3	YBR272C	MEK1	P24719	497 aa	Predicted RBP	6.23	□□□□□ -1.41
HSM3	YBR272C	OMA1	P36163	345 aa		6.23	□□□□□ -1.41
HSM3	YBR272C	REG2	P38232	338 aa		6.23	□□□□□ -1.41
HSM3	YBR272C	DBP8	P38719	431 aa		6.23	□□□□□ -1.41
HSM3	YBR272C	CHS7	P38843	316 aa		6.23	□□□□□ -1.41
HSM3	YBR272C	SSN3	P39073	555 aa		6.23	□□□□□ -1.41
HSM3	YBR272C	STE24	P47154	453 aa		6.23	□□□□□ -1.41
HSM3	YBR272C	RIB4	P50861	169 aa	Predicted RBP	6.23	□□□□□ -1.41
HSM3	YBR272C	AIM34	Q03673	198 aa		6.23	□□□□□ -1.41
HSM3	YBR272C	UPS3	Q04006	179 aa		6.23	□□□□□ -1.41
HSM3	YBR272C	PPN1	Q04119	674 aa		6.23	□□□□□ -1.41
HSM3	YBR272C	DAL4	Q04895	635 aa		6.23	□□□□□ -1.41
HSM3	YBR272C	YMR321C	Q04898	105 aa		6.23	□□□□□ -1.41
HSM3	YBR272C	ENV7	Q12003	364 aa		6.23	□□□□□ -1.41
HSM3	YBR272C	LCB4	Q12246	624 aa		6.23	□□□□□ -1.41
HSM3	YBR272C	PST1	Q12355	444 aa		6.23	□□□□□ -1.41
HSM3	YBR272C	ATG5	Q12380	294 aa		6.23	□□□□□ -1.41
HSM3	YBR272C	SFG1	Q12507	346 aa		6.23	□□□□□ -1.41
HSM3	YBR272C	MHT1	Q12525	324 aa		6.23	□□□□□ -1.41
HSM3	YBR272C	VMA9	Q3E7B6	73 aa		6.23	□□□□□ -1.41
HSM3	YBR272C	YKL033W-A	Q86ZR7	236 aa		6.23	□□□□□ -1.41
HSM3	YBR272C	BI3	Q9ZZW7	517 aa		6.23	□□□□□ -1.41
HSM3	YBR272C	FAB1	P34756	2278 aa		6.22	□□□□□ -1.41
HSM3	YBR272C	ADE4	P04046	510 aa	Known RBP	6.22	□□□□□ -1.41
HSM3	YBR272C	DAT1	P13483	248 aa	Known RBP	6.22	□□□□□ -1.41
HSM3	YBR272C	TMT1	P32643	299 aa		6.22	□□□□□ -1.41

Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms