RNA–Protein interactions for RNA: YBL017C

PEP1, Transcript of Type I transmembrane sorting receptor for multiple vacuolar hydrolases, yeastyeast

Gene PEP1, Length 4,740 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP1YBL017C PPA2P28239 310 aa1.64□□□□□ -2.15
PEP1YBL017C ARO7P32178 256 aa1.64□□□□□ -2.15
PEP1YBL017C SAC1P32368 623 aaKnown RBP1.64□□□□□ -2.15
PEP1YBL017C MDH3P32419 343 aaKnown RBP RIP-Chip data1.64□□□□□ -2.15not detected
PEP1YBL017C SUR1P33300 382 aa1.64□□□□□ -2.15
PEP1YBL017C SOF1P33750 489 aaKnown RBP1.64□□□□□ -2.15
PEP1YBL017C AST1P35183 429 aa1.64□□□□□ -2.15
PEP1YBL017C ATG7P38862 630 aa1.64□□□□□ -2.15
PEP1YBL017C MBP1P39678 833 aa1.64□□□□□ -2.15
PEP1YBL017C YER010CP40011 234 aa1.64□□□□□ -2.15
PEP1YBL017C SPO73P40031 143 aa1.64□□□□□ -2.15
PEP1YBL017C SLZ1P40167 298 aa1.64□□□□□ -2.15
PEP1YBL017C GPP1P41277 250 aaKnown RBP1.64□□□□□ -2.15
PEP1YBL017C SHR5P41912 237 aa1.64□□□□□ -2.15
PEP1YBL017C QRI7P43122 407 aa1.64□□□□□ -2.15
PEP1YBL017C MDE1P47095 244 aa1.64□□□□□ -2.15
PEP1YBL017C SLX9P53251 210 aaPredicted RBP1.64□□□□□ -2.15
PEP1YBL017C HCH1P53834 153 aa1.64□□□□□ -2.15
PEP1YBL017C OCA2P53949 197 aa1.64□□□□□ -2.15
PEP1YBL017C SWF1Q04629 336 aa1.64□□□□□ -2.15
PEP1YBL017C SLO1Q3E784 85 aa1.64□□□□□ -2.15
PEP1YBL017C IPP1P00817 287 aaKnown RBP1.63□□□□□ -2.15
PEP1YBL017C ARG81P05085 880 aa1.63□□□□□ -2.15
PEP1YBL017C GBP2P25555 427 aaKnown RBP RIP-Chip data1.63□□□□□ -2.15not detected
PEP1YBL017C PCL2P25693 308 aa1.63□□□□□ -2.15
PEP1YBL017C RPS5P26783 225 aaKnown RBP1.63□□□□□ -2.15
PEP1YBL017C VMA6P32366 345 aaKnown RBP1.63□□□□□ -2.15
PEP1YBL017C LHP1P33399 275 aaKnown RBP1.63□□□□□ -2.15
PEP1YBL017C ECT1P33412 323 aa1.63□□□□□ -2.15
PEP1YBL017C AMN1P38285 549 aaPredicted RBP1.63□□□□□ -2.15
PEP1YBL017C YHR122WP38829 231 aa1.63□□□□□ -2.15
PEP1YBL017C NSG1P38837 291 aa1.63□□□□□ -2.15
PEP1YBL017C YHR210CP38893 341 aa1.63□□□□□ -2.15
PEP1YBL017C JLP2P40206 208 aa1.63□□□□□ -2.15
PEP1YBL017C VHS2P40463 436 aa1.63□□□□□ -2.15
PEP1YBL017C RTS2P40962 232 aa1.63□□□□□ -2.15
PEP1YBL017C SNX4P47057 423 aa1.63□□□□□ -2.15
PEP1YBL017C POP6P53218 158 aa1.63□□□□□ -2.15
PEP1YBL017C YNL095CP53932 642 aa1.63□□□□□ -2.15
PEP1YBL017C SWP1Q02795 286 aa1.63□□□□□ -2.15
PEP1YBL017C ARX1Q03862 593 aaKnown RBP1.63□□□□□ -2.15
PEP1YBL017C RSM24Q03976 319 aa1.63□□□□□ -2.15
PEP1YBL017C PEX27Q08580 376 aa1.63□□□□□ -2.15
PEP1YBL017C ATP16Q12165 160 aa1.63□□□□□ -2.15
PEP1YBL017C FRE6Q12473 712 aa1.63□□□□□ -2.15
PEP1YBL017C Q0297Q9ZZV8 51 aa1.63□□□□□ -2.15
PEP1YBL017C COR1P07256 457 aa1.63□□□□□ -2.15
PEP1YBL017C YBR121C-AP0C5L4 52 aa1.63□□□□□ -2.15
PEP1YBL017C COS2P0CX12 379 aa1.63□□□□□ -2.15
PEP1YBL017C COS3P0CX13 379 aa1.63□□□□□ -2.15
PEP1YBL017C KGD1P20967 1014 aaKnown RBP1.63□□□□□ -2.15
PEP1YBL017C IDP1P21954 428 aaKnown RBP1.63□□□□□ -2.15
PEP1YBL017C RPB10P22139 70 aa1.63□□□□□ -2.15
PEP1YBL017C HYP2P23301 157 aaKnown RBP1.63□□□□□ -2.15
PEP1YBL017C DOA4P32571 926 aa1.63□□□□□ -2.15
PEP1YBL017C YEF1P32622 495 aa1.63□□□□□ -2.15
PEP1YBL017C ALK2P32789 676 aaPredicted RBP1.63□□□□□ -2.15
PEP1YBL017C YOX1P34161 385 aa1.63□□□□□ -2.15
PEP1YBL017C PTC1P35182 281 aa1.63□□□□□ -2.15
PEP1YBL017C MRPL39P36533 70 aa1.63□□□□□ -2.15
PEP1YBL017C LSM12P38828 187 aaKnown RBP1.63□□□□□ -2.15
PEP1YBL017C RMD6P39975 231 aa1.63□□□□□ -2.15
PEP1YBL017C SHO1P40073 367 aa1.63□□□□□ -2.15
PEP1YBL017C PUG1P40100 303 aa1.63□□□□□ -2.15
PEP1YBL017C HPM1P40481 377 aa1.63□□□□□ -2.15
PEP1YBL017C HXT9P40885 567 aa1.63□□□□□ -2.15
PEP1YBL017C QRI1P43123 477 aaKnown RBP1.63□□□□□ -2.15
PEP1YBL017C COS4P43542 379 aa1.63□□□□□ -2.15
PEP1YBL017C YGR039WP53225 103 aa1.63□□□□□ -2.15
PEP1YBL017C HXT11P54862 567 aa1.63□□□□□ -2.15
PEP1YBL017C RSN1Q03516 953 aa1.63□□□□□ -2.15
PEP1YBL017C TPP1Q03796 238 aa1.63□□□□□ -2.15
PEP1YBL017C LIP2Q06005 328 aa1.63□□□□□ -2.15
PEP1YBL017C TPT1Q12272 230 aaKnown RBP1.63□□□□□ -2.15
PEP1YBL017C DFG16Q99234 619 aa1.63□□□□□ -2.15
PEP1YBL017C MED11Q99278 115 aa1.63□□□□□ -2.15
PEP1YBL017C CDC28P00546 298 aaKnown RBP1.63□□□□□ -2.15
PEP1YBL017C ARG3P05150 338 aa1.63□□□□□ -2.15
PEP1YBL017C ARF1P11076 181 aaKnown RBP1.63□□□□□ -2.15
PEP1YBL017C ZRC1P20107 442 aa1.63□□□□□ -2.15
PEP1YBL017C PEX4P29340 183 aa1.63□□□□□ -2.15
PEP1YBL017C VMA5P31412 392 aaKnown RBP1.63□□□□□ -2.15
PEP1YBL017C ASF2P32448 525 aaPredicted RBP1.63□□□□□ -2.15
PEP1YBL017C PRP21P32524 280 aaPredicted RBP1.63□□□□□ -2.15
PEP1YBL017C NRP1P32770 719 aaKnown RBP RIP-Chip data1.63□□□□□ -2.15not detected
PEP1YBL017C PRE3P38624 215 aa1.63□□□□□ -2.15
PEP1YBL017C RPS26AP39938 119 aaKnown RBP1.63□□□□□ -2.15
PEP1YBL017C RPS26BP39939 119 aaKnown RBP1.63□□□□□ -2.15
PEP1YBL017C RRG9P40156 214 aa1.63□□□□□ -2.15
PEP1YBL017C IDP2P41939 412 aa1.63□□□□□ -2.15
PEP1YBL017C GLO1P50107 326 aa1.63□□□□□ -2.15
PEP1YBL017C ATP19P81451 68 aa1.63□□□□□ -2.15
PEP1YBL017C SCS7Q03529 384 aa1.63□□□□□ -2.15
PEP1YBL017C SSY1Q03770 852 aa1.63□□□□□ -2.15
PEP1YBL017C YDR249CQ03787 373 aa1.63□□□□□ -2.15
PEP1YBL017C DLT1Q04216 342 aa1.63□□□□□ -2.15
PEP1YBL017C SPC24Q04477 213 aa1.63□□□□□ -2.15
PEP1YBL017C YPR196WQ06595 470 aa1.63□□□□□ -2.15
PEP1YBL017C THP1Q08231 455 aa1.63□□□□□ -2.15
PEP1YBL017C APC9Q12107 265 aa1.63□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms