RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 GREB1Q4ZG55 1949 aa14.36□□□□□ -0.11
RABGGTA-213ENST00000560127 ARL5CA6NH57 179 aa14.35□□□□□ -0.11
RABGGTA-213ENST00000560127 GOLGA8AA7E2F4 631 aa14.35□□□□□ -0.11
RABGGTA-213ENST00000560127 GOLGA8BA8MQT2 603 aa14.35□□□□□ -0.11
RABGGTA-213ENST00000560127 TARSP26639 723 aaKnown RBP14.35□□□□□ -0.11
RABGGTA-213ENST00000560127 FZD5Q13467 585 aa14.35□□□□□ -0.11
RABGGTA-213ENST00000560127 NECTIN1Q15223 517 aa14.35□□□□□ -0.11
RABGGTA-213ENST00000560127 PPM1JQ5JR12 505 aa14.35□□□□□ -0.11
RABGGTA-213ENST00000560127 ZBTB41Q5SVQ8 909 aa14.35□□□□□ -0.11
RABGGTA-213ENST00000560127 MTSS1LQ765P7 747 aa14.35□□□□□ -0.11
RABGGTA-213ENST00000560127 MIER3Q7Z3K6 550 aa14.35□□□□□ -0.11
RABGGTA-213ENST00000560127 FGF13Q92913 245 aa14.35□□□□□ -0.11
RABGGTA-213ENST00000560127 CHAMP1Q96JM3 812 aa14.35□□□□□ -0.11
RABGGTA-213ENST00000560127 TCEANC2Q96MN5 208 aa14.35□□□□□ -0.11
RABGGTA-213ENST00000560127 GAD1Q99259 594 aa14.35□□□□□ -0.11
RABGGTA-213ENST00000560127 TEKT3Q9BXF9 490 aa14.35□□□□□ -0.11
RABGGTA-213ENST00000560127 RNF39Q9H2S5 420 aa14.35□□□□□ -0.11
RABGGTA-213ENST00000560127 C6orf50Q9HD87 102 aa14.35□□□□□ -0.11
RABGGTA-213ENST00000560127 GMEB2Q9UKD1 530 aa14.35□□□□□ -0.11
RABGGTA-213ENST00000560127 RALYQ9UKM9 306 aaKnown RBP14.35□□□□□ -0.11
RABGGTA-213ENST00000560127 PDCD11Q14690 1871 aaKnown RBP14.34□□□□□ -0.11
RABGGTA-213ENST00000560127 DDX11L8A8MPP1 907 aa14.34□□□□□ -0.11
RABGGTA-213ENST00000560127 SLC30A4O14863 429 aa14.34□□□□□ -0.11
RABGGTA-213ENST00000560127 PSMD10O75832 226 aa14.34□□□□□ -0.11
RABGGTA-213ENST00000560127 TDGF1P13385 188 aa14.34□□□□□ -0.11
RABGGTA-213ENST00000560127 ITGA4P13612 1032 aa14.34□□□□□ -0.11
RABGGTA-213ENST00000560127 MLH1P40692 756 aa14.34□□□□□ -0.11
RABGGTA-213ENST00000560127 SCNN1GP51170 649 aa14.34□□□□□ -0.11
RABGGTA-213ENST00000560127 EXOSC10Q01780 885 aaKnown RBP14.34□□□□□ -0.11
RABGGTA-213ENST00000560127 PFKPQ01813 784 aa14.34□□□□□ -0.11
RABGGTA-213ENST00000560127 SPEM2Q0P670 501 aa14.34□□□□□ -0.11
RABGGTA-213ENST00000560127 USP41Q3LFD5 358 aa14.34□□□□□ -0.11
RABGGTA-213ENST00000560127 FUT10Q6P4F1 479 aa14.34□□□□□ -0.11
RABGGTA-213ENST00000560127 B3GNT9Q6UX72 402 aa14.34□□□□□ -0.11
RABGGTA-213ENST00000560127 ANO5Q75V66 913 aa14.34□□□□□ -0.11
RABGGTA-213ENST00000560127 SRGAP1Q7Z6B7 1085 aa14.34□□□□□ -0.11
RABGGTA-213ENST00000560127 GPR65Q8IYL9 337 aa14.34□□□□□ -0.11
RABGGTA-213ENST00000560127 RDM1Q8NG50 284 aa14.34□□□□□ -0.11
RABGGTA-213ENST00000560127 ITFG1Q8TB96 612 aa14.34□□□□□ -0.11
RABGGTA-213ENST00000560127 CCDC136Q96JN2 1154 aa14.34□□□□□ -0.11
RABGGTA-213ENST00000560127 ZFP42Q96MM3 310 aa14.34□□□□□ -0.11
RABGGTA-213ENST00000560127 KXD1Q9BQD3 176 aa14.34□□□□□ -0.11
RABGGTA-213ENST00000560127 UBN1Q9NPG3 1134 aa14.34□□□□□ -0.11
RABGGTA-213ENST00000560127 FBXW11Q9UKB1 542 aa14.34□□□□□ -0.11
RABGGTA-213ENST00000560127 IPPQ9Y573 584 aa14.34□□□□□ -0.11
RABGGTA-213ENST00000560127 COL4A3BPQ9Y5P4 624 aa14.34□□□□□ -0.11
RABGGTA-213ENST00000560127 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.34□□□□□ -0.11
RABGGTA-213ENST00000560127 TICRRQ7Z2Z1 1910 aa14.34□□□□□ -0.11
RABGGTA-213ENST00000560127 SPEGQ15772 3267 aa14.34□□□□□ -0.11
RABGGTA-213ENST00000560127 SHISA7A6NL88 538 aa14.33□□□□□ -0.12
RABGGTA-213ENST00000560127 SRGAP2CP0DJJ0 459 aa14.33□□□□□ -0.12
RABGGTA-213ENST00000560127 ADD1P35611 737 aaKnown RBP14.33□□□□□ -0.12
RABGGTA-213ENST00000560127 RPS9P46781 194 aaKnown RBP14.33□□□□□ -0.12
RABGGTA-213ENST00000560127 PLA2G4FQ68DD2 849 aa14.33□□□□□ -0.12
RABGGTA-213ENST00000560127 TPRG1Q6ZUI0 275 aa14.33□□□□□ -0.12
RABGGTA-213ENST00000560127 CNNM3Q8NE01 707 aa14.33□□□□□ -0.12
RABGGTA-213ENST00000560127 NETO1Q8TDF5 533 aa14.33□□□□□ -0.12
RABGGTA-213ENST00000560127 COLEC11Q9BWP8 271 aa14.33□□□□□ -0.12
RABGGTA-213ENST00000560127 EIF2AQ9BY44 585 aaKnown RBP14.33□□□□□ -0.12
RABGGTA-213ENST00000560127 FAM126AQ9BYI3 521 aaPredicted RBP14.33□□□□□ -0.12
RABGGTA-213ENST00000560127 HES2Q9Y543 173 aa14.33□□□□□ -0.12
RABGGTA-213ENST00000560127 PKD1L2Q7Z442 2459 aa14.33□□□□□ -0.12
RABGGTA-213ENST00000560127 COL4A2P08572 1712 aa14.32□□□□□ -0.12
RABGGTA-213ENST00000560127 KLF18A0A0U1RQI7 1052 aa14.32□□□□□ -0.12
RABGGTA-213ENST00000560127 GNA11P29992 359 aa14.32□□□□□ -0.12
RABGGTA-213ENST00000560127 MTAPQ13126 283 aa14.32□□□□□ -0.12
RABGGTA-213ENST00000560127 LPAL2Q16609 132 aa14.32□□□□□ -0.12
RABGGTA-213ENST00000560127 PRSS55Q6UWB4 352 aaPredicted RBP14.32□□□□□ -0.12
RABGGTA-213ENST00000560127 ZNF579Q8NAF0 562 aaKnown RBP14.32□□□□□ -0.12
RABGGTA-213ENST00000560127 GSTCDQ8NEC7 633 aa14.32□□□□□ -0.12
RABGGTA-213ENST00000560127 CCDC12Q8WUD4 166 aaPredicted RBP14.32□□□□□ -0.12
RABGGTA-213ENST00000560127 PRPF31Q8WWY3 499 aaKnown RBP14.32□□□□□ -0.12
RABGGTA-213ENST00000560127 RABGGTAQ92696 567 aa14.32□□□□□ -0.12
RABGGTA-213ENST00000560127 TMEM143Q96AN5 459 aa14.32□□□□□ -0.12
RABGGTA-213ENST00000560127 NELL2Q99435 816 aa14.32□□□□□ -0.12
RABGGTA-213ENST00000560127 JPH2Q9BR39 696 aaPredicted RBP14.32□□□□□ -0.12
RABGGTA-213ENST00000560127 PHF20Q9BVI0 1012 aa14.32□□□□□ -0.12
RABGGTA-213ENST00000560127 ADAM28Q9UKQ2 775 aa14.32□□□□□ -0.12
RABGGTA-213ENST00000560127 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.31□□□□□ -0.12
RABGGTA-213ENST00000560127 NCAM2O15394 837 aa14.31□□□□□ -0.12
RABGGTA-213ENST00000560127 CCL16O15467 120 aa14.31□□□□□ -0.12
RABGGTA-213ENST00000560127 NR1I2O75469 434 aa14.31□□□□□ -0.12
RABGGTA-213ENST00000560127 HNRNPA1P09651 372 aaKnown RBP eCLIP14.31□□□□□ -0.12
RABGGTA-213ENST00000560127 USP11P51784 963 aa14.31□□□□□ -0.12
RABGGTA-213ENST00000560127 NPEPPSP55786 919 aa14.31□□□□□ -0.12
RABGGTA-213ENST00000560127 CREMQ03060 361 aa14.31□□□□□ -0.12
RABGGTA-213ENST00000560127 LAMTOR4Q0VGL1 99 aa14.31□□□□□ -0.12
RABGGTA-213ENST00000560127 RTP2Q5QGT7 225 aa14.31□□□□□ -0.12
RABGGTA-213ENST00000560127 LAIR1Q6GTX8 287 aa14.31□□□□□ -0.12
RABGGTA-213ENST00000560127 CLSTN3Q9BQT9 956 aa14.31□□□□□ -0.12
RABGGTA-213ENST00000560127 DSPP15924 2871 aaKnown RBP14.31□□□□□ -0.12
RABGGTA-213ENST00000560127 C8AP07357 584 aa14.3□□□□□ -0.12
RABGGTA-213ENST00000560127 RCAN1P53805 252 aa14.3□□□□□ -0.12
RABGGTA-213ENST00000560127 PSMC5P62195 406 aa14.3□□□□□ -0.12
RABGGTA-213ENST00000560127 ADCY1Q08828 1119 aa14.3□□□□□ -0.12
RABGGTA-213ENST00000560127 Q4G0T1 1027 aa14.3□□□□□ -0.12
RABGGTA-213ENST00000560127 PPM1LQ5SGD2 360 aa14.3□□□□□ -0.12
RABGGTA-213ENST00000560127 LIN9Q5TKA1 542 aa14.3□□□□□ -0.12
RABGGTA-213ENST00000560127 ZNF852Q6ZMS4 543 aa14.3□□□□□ -0.12
RABGGTA-213ENST00000560127 DHX32Q7L7V1 743 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms