RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 UBXN2BQ14CS0 331 aa14.05□□□□□ -0.16
PSEN1-221ENST00000557293 ST3GAL2Q16842 350 aa14.05□□□□□ -0.16
PSEN1-221ENST00000557293 TSGA10IPQ3SY00 556 aa14.05□□□□□ -0.16
PSEN1-221ENST00000557293 Q4G0T1 1027 aa14.05□□□□□ -0.16
PSEN1-221ENST00000557293 FUT10Q6P4F1 479 aa14.05□□□□□ -0.16
PSEN1-221ENST00000557293 TSSK4Q6SA08 328 aa14.05□□□□□ -0.16
PSEN1-221ENST00000557293 ATRIPQ8WXE1 791 aa14.05□□□□□ -0.16
PSEN1-221ENST00000557293 FGF13Q92913 245 aa14.05□□□□□ -0.16
PSEN1-221ENST00000557293 PHKBQ93100 1093 aa14.05□□□□□ -0.16
PSEN1-221ENST00000557293 DHX33Q9H6R0 707 aaKnown RBP14.05□□□□□ -0.16
PSEN1-221ENST00000557293 UBN1Q9NPG3 1134 aa14.05□□□□□ -0.16
PSEN1-221ENST00000557293 WRAP73Q9P2S5 460 aaPredicted RBP14.05□□□□□ -0.16
PSEN1-221ENST00000557293 HES2Q9Y543 173 aa14.05□□□□□ -0.16
PSEN1-221ENST00000557293 NOTCH4Q99466 2003 aa14.04□□□□□ -0.16
PSEN1-221ENST00000557293 CYP3A7-CYP3A51PA0A087WV96 503 aa14.04□□□□□ -0.16
PSEN1-221ENST00000557293 TBC1D4O60343 1298 aa14.04□□□□□ -0.16
PSEN1-221ENST00000557293 SRGAP2CP0DJJ0 459 aa14.04□□□□□ -0.16
PSEN1-221ENST00000557293 TDGF1P13385 188 aa14.04□□□□□ -0.16
PSEN1-221ENST00000557293 CYP3A7P24462 503 aa14.04□□□□□ -0.16
PSEN1-221ENST00000557293 TARSP26639 723 aaKnown RBP14.04□□□□□ -0.16
PSEN1-221ENST00000557293 MLH1P40692 756 aa14.04□□□□□ -0.16
PSEN1-221ENST00000557293 LMNB2Q03252 620 aa14.04□□□□□ -0.16
PSEN1-221ENST00000557293 LAMTOR4Q0VGL1 99 aa14.04□□□□□ -0.16
PSEN1-221ENST00000557293 NTRK3Q16288 839 aa14.04□□□□□ -0.16
PSEN1-221ENST00000557293 USP41Q3LFD5 358 aa14.04□□□□□ -0.16
PSEN1-221ENST00000557293 PRSS55Q6UWB4 352 aaPredicted RBP14.04□□□□□ -0.16
PSEN1-221ENST00000557293 RSPO2Q6UXX9 243 aaPredicted RBP14.04□□□□□ -0.16
PSEN1-221ENST00000557293 ZNF687Q8N1G0 1237 aa14.04□□□□□ -0.16
PSEN1-221ENST00000557293 CNNM3Q8NE01 707 aa14.04□□□□□ -0.16
PSEN1-221ENST00000557293 ITFG1Q8TB96 612 aa14.04□□□□□ -0.16
PSEN1-221ENST00000557293 ETNPPLQ8TBG4 499 aa14.04□□□□□ -0.16
PSEN1-221ENST00000557293 RABGGTAQ92696 567 aa14.04□□□□□ -0.16
PSEN1-221ENST00000557293 TMEM143Q96AN5 459 aa14.04□□□□□ -0.16
PSEN1-221ENST00000557293 CLSTN3Q9BQT9 956 aa14.04□□□□□ -0.16
PSEN1-221ENST00000557293 COLEC11Q9BWP8 271 aa14.04□□□□□ -0.16
PSEN1-221ENST00000557293 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.04□□□□□ -0.16
PSEN1-221ENST00000557293 TDP2O95551 362 aa14.03□□□□□ -0.16
PSEN1-221ENST00000557293 PSMC5P62195 406 aa14.03□□□□□ -0.16
PSEN1-221ENST00000557293 ZBTB41Q5SVQ8 909 aa14.03□□□□□ -0.16
PSEN1-221ENST00000557293 TBCKQ8TEA7 893 aa14.03□□□□□ -0.16
PSEN1-221ENST00000557293 CCDC12Q8WUD4 166 aaPredicted RBP14.03□□□□□ -0.16
PSEN1-221ENST00000557293 PLA2G2FQ9BZM2 168 aa14.03□□□□□ -0.16
PSEN1-221ENST00000557293 PRMT8Q9NR22 394 aaPredicted RBP14.03□□□□□ -0.16
PSEN1-221ENST00000557293 CACNG4Q9UBN1 327 aa14.03□□□□□ -0.16
PSEN1-221ENST00000557293 FBXW11Q9UKB1 542 aa14.03□□□□□ -0.16
PSEN1-221ENST00000557293 CDV3Q9UKY7 258 aaKnown RBP14.03□□□□□ -0.16
PSEN1-221ENST00000557293 ADAM12O43184 909 aa14.02□□□□□ -0.17
PSEN1-221ENST00000557293 TSPAN1O60635 241 aa14.02□□□□□ -0.17
PSEN1-221ENST00000557293 HNRNPA1P09651 372 aaKnown RBP eCLIP14.02□□□□□ -0.17
PSEN1-221ENST00000557293 CPA1P15085 419 aa14.02□□□□□ -0.17
PSEN1-221ENST00000557293 MAGEA9P43362 315 aa14.02□□□□□ -0.17
PSEN1-221ENST00000557293 RPS9P46781 194 aaKnown RBP14.02□□□□□ -0.17
PSEN1-221ENST00000557293 AMHR2Q16671 573 aa14.02□□□□□ -0.17
PSEN1-221ENST00000557293 RTP2Q5QGT7 225 aa14.02□□□□□ -0.17
PSEN1-221ENST00000557293 FERMT3Q86UX7 667 aa14.02□□□□□ -0.17
PSEN1-221ENST00000557293 LNX1Q8TBB1 728 aaPredicted RBP14.02□□□□□ -0.17
PSEN1-221ENST00000557293 BICD2Q8TD16 824 aa14.02□□□□□ -0.17
PSEN1-221ENST00000557293 CPB2Q96IY4 423 aa14.02□□□□□ -0.17
PSEN1-221ENST00000557293 NELL2Q99435 816 aa14.02□□□□□ -0.17
PSEN1-221ENST00000557293 KXD1Q9BQD3 176 aa14.02□□□□□ -0.17
PSEN1-221ENST00000557293 JPH2Q9BR39 696 aaPredicted RBP14.02□□□□□ -0.17
PSEN1-221ENST00000557293 PAAF1Q9BRP4 392 aa14.02□□□□□ -0.17
PSEN1-221ENST00000557293 CSRNP2Q9H175 543 aa14.02□□□□□ -0.17
PSEN1-221ENST00000557293 ANO2Q9NQ90 1003 aa14.02□□□□□ -0.17
PSEN1-221ENST00000557293 VPS54Q9P1Q0 977 aa14.02□□□□□ -0.17
PSEN1-221ENST00000557293 ADAM28Q9UKQ2 775 aa14.02□□□□□ -0.17
PSEN1-221ENST00000557293 USP18Q9UMW8 372 aa14.02□□□□□ -0.17
PSEN1-221ENST00000557293 GIT1Q9Y2X7 761 aa14.02□□□□□ -0.17
PSEN1-221ENST00000557293 M0R2N6 131 aa14.01□□□□□ -0.17
PSEN1-221ENST00000557293 ZBTB39O15060 712 aa14.01□□□□□ -0.17
PSEN1-221ENST00000557293 PTENP60484 403 aa14.01□□□□□ -0.17
PSEN1-221ENST00000557293 MTAPQ13126 283 aa14.01□□□□□ -0.17
PSEN1-221ENST00000557293 MTSS1LQ765P7 747 aa14.01□□□□□ -0.17
PSEN1-221ENST00000557293 RNF149Q8NC42 400 aa14.01□□□□□ -0.17
PSEN1-221ENST00000557293 HCFC1R1Q9NWW0 138 aa14.01□□□□□ -0.17
PSEN1-221ENST00000557293 DNMT3BQ9UBC3 853 aaKnown RBP14.01□□□□□ -0.17
PSEN1-221ENST00000557293 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.01□□□□□ -0.17
PSEN1-221ENST00000557293 USP24Q9UPU5 2620 aa14.01□□□□□ -0.17
PSEN1-221ENST00000557293 CACNA1GO43497 2377 aa14.01□□□□□ -0.17
PSEN1-221ENST00000557293 CHD6Q8TD26 2715 aa14□□□□□ -0.17
PSEN1-221ENST00000557293 CCDC196A0A1B0GTZ2 297 aa14□□□□□ -0.17
PSEN1-221ENST00000557293 SLC30A4O14863 429 aa14□□□□□ -0.17
PSEN1-221ENST00000557293 CCL16O15467 120 aa14□□□□□ -0.17
PSEN1-221ENST00000557293 ASAP2O43150 1006 aa14□□□□□ -0.17
PSEN1-221ENST00000557293 AKAP5P24588 427 aa14□□□□□ -0.17
PSEN1-221ENST00000557293 AXLP30530 894 aa14□□□□□ -0.17
PSEN1-221ENST00000557293 HOXA9P31269 272 aa14□□□□□ -0.17
PSEN1-221ENST00000557293 QARSP47897 775 aaKnown RBP14□□□□□ -0.17
PSEN1-221ENST00000557293 SPEM2Q0P670 501 aa14□□□□□ -0.17
PSEN1-221ENST00000557293 NPY5RQ15761 445 aa14□□□□□ -0.17
PSEN1-221ENST00000557293 MAMSTRQ6ZN01 415 aa14□□□□□ -0.17
PSEN1-221ENST00000557293 TPRG1Q6ZUI0 275 aa14□□□□□ -0.17
PSEN1-221ENST00000557293 IFNLR1Q8IU57 520 aaPredicted RBP14□□□□□ -0.17
PSEN1-221ENST00000557293 NPAS3Q8IXF0 933 aa14□□□□□ -0.17
PSEN1-221ENST00000557293 PSPC1Q8WXF1 523 aaKnown RBP14□□□□□ -0.17
PSEN1-221ENST00000557293 PIK3R5Q8WYR1 880 aa14□□□□□ -0.17
PSEN1-221ENST00000557293 CEP170P1Q96L14 293 aa14□□□□□ -0.17
PSEN1-221ENST00000557293 PHF20Q9BVI0 1012 aa14□□□□□ -0.17
PSEN1-221ENST00000557293 NXF3Q9H4D5 531 aaKnown RBP14□□□□□ -0.17
PSEN1-221ENST00000557293 XPNPEP1Q9NQW7 623 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms