RNA–Protein interactions for RNA: ENST00000550767.5

TUBA1A-207, Transcript of tubulin alpha 1a, humanhuman

TSL 1 (best) BASIC

Gene TUBA1A, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-207ENST00000550767 HVCN1Q96D96 273 aa13.13□□□□□ -0.31
TUBA1A-207ENST00000550767 BICD1Q96G01 975 aa13.13□□□□□ -0.31
TUBA1A-207ENST00000550767 PAGE5Q96GU1 130 aa13.13□□□□□ -0.31
TUBA1A-207ENST00000550767 ACO2Q99798 780 aaKnown RBP13.13□□□□□ -0.31
TUBA1A-207ENST00000550767 TMEM117Q9H0C3 514 aa13.13□□□□□ -0.31
TUBA1A-207ENST00000550767 NXF3Q9H4D5 531 aaKnown RBP13.13□□□□□ -0.31
TUBA1A-207ENST00000550767 ST6GALNAC4Q9H4F1 302 aa13.13□□□□□ -0.31
TUBA1A-207ENST00000550767 TBC1D7Q9P0N9 293 aa13.13□□□□□ -0.31
TUBA1A-207ENST00000550767 TBX20Q9UMR3 447 aa13.13□□□□□ -0.31
TUBA1A-207ENST00000550767 TNFSF13BQ9Y275 285 aa13.13□□□□□ -0.31
TUBA1A-207ENST00000550767 XIRP2A4UGR9 3374 aa13.13□□□□□ -0.31
TUBA1A-207ENST00000550767 MEIS3P2A8K0S8 358 aa13.12□□□□□ -0.31
TUBA1A-207ENST00000550767 HNRNPDLO14979 420 aaKnown RBP13.12□□□□□ -0.31
TUBA1A-207ENST00000550767 CASP1P29466 404 aa13.12□□□□□ -0.31
TUBA1A-207ENST00000550767 LIG4P49917 911 aa13.12□□□□□ -0.31
TUBA1A-207ENST00000550767 FAM160A1Q05DH4 1040 aa13.12□□□□□ -0.31
TUBA1A-207ENST00000550767 CUL4BQ13620 913 aa13.12□□□□□ -0.31
TUBA1A-207ENST00000550767 ALCAMQ13740 583 aa13.12□□□□□ -0.31
TUBA1A-207ENST00000550767 ZC2HC1CQ53FD0 456 aaPredicted RBP13.12□□□□□ -0.31
TUBA1A-207ENST00000550767 CLLU1OSQ5K130 101 aa13.12□□□□□ -0.31
TUBA1A-207ENST00000550767 AGMOQ6ZNB7 445 aa13.12□□□□□ -0.31
TUBA1A-207ENST00000550767 ZNF720Q7Z2F6 126 aa13.12□□□□□ -0.31
TUBA1A-207ENST00000550767 MAP4K3Q8IVH8 894 aa13.12□□□□□ -0.31
TUBA1A-207ENST00000550767 FMR1NBQ8N0W7 255 aaPredicted RBP13.12□□□□□ -0.31
TUBA1A-207ENST00000550767 LRRC43Q8N309 656 aa13.12□□□□□ -0.31
TUBA1A-207ENST00000550767 SMG8Q8ND04 991 aaKnown RBP13.12□□□□□ -0.31
TUBA1A-207ENST00000550767 HELQQ8TDG4 1101 aa13.12□□□□□ -0.31
TUBA1A-207ENST00000550767 SAMD11Q96NU1 681 aa13.12□□□□□ -0.31
TUBA1A-207ENST00000550767 TGS1Q96RS0 853 aaKnown RBP13.12□□□□□ -0.31
TUBA1A-207ENST00000550767 TCHPQ9BT92 498 aa13.12□□□□□ -0.31
TUBA1A-207ENST00000550767 APOL6Q9BWW8 343 aa13.12□□□□□ -0.31
TUBA1A-207ENST00000550767 MRPL9Q9BYD2 267 aaKnown RBP13.12□□□□□ -0.31
TUBA1A-207ENST00000550767 RSAD1Q9HA92 442 aa13.12□□□□□ -0.31
TUBA1A-207ENST00000550767 RNF19AQ9NV58 838 aa13.12□□□□□ -0.31
TUBA1A-207ENST00000550767 ANKFY1Q9P2R3 1169 aa13.12□□□□□ -0.31
TUBA1A-207ENST00000550767 HES2Q9Y543 173 aa13.12□□□□□ -0.31
TUBA1A-207ENST00000550767 NCOR1O75376 2440 aa13.12□□□□□ -0.31
TUBA1A-207ENST00000550767 MUC3AQ02505 3323 aa13.12□□□□□ -0.31
TUBA1A-207ENST00000550767 PVALEFA0A1B0GWK0 134 aa13.11□□□□□ -0.31
TUBA1A-207ENST00000550767 GADD45BO75293 160 aaPredicted RBP13.11□□□□□ -0.31
TUBA1A-207ENST00000550767 TOM1L1O75674 476 aa13.11□□□□□ -0.31
TUBA1A-207ENST00000550767 PPP1R37O75864 691 aa13.11□□□□□ -0.31
TUBA1A-207ENST00000550767 ERVK-21P61565 698 aa13.11□□□□□ -0.31
TUBA1A-207ENST00000550767 MRPS5P82675 430 aaKnown RBP13.11□□□□□ -0.31
TUBA1A-207ENST00000550767 FAM26FQ5R3K3 315 aa13.11□□□□□ -0.31
TUBA1A-207ENST00000550767 KANK3Q6NY19 840 aa13.11□□□□□ -0.31
TUBA1A-207ENST00000550767 MPZL3Q6UWV2 235 aa13.11□□□□□ -0.31
TUBA1A-207ENST00000550767 STXBP4Q6ZWJ1 553 aa13.11□□□□□ -0.31
TUBA1A-207ENST00000550767 SPRED2Q7Z698 418 aa13.11□□□□□ -0.31
TUBA1A-207ENST00000550767 MICALL1Q8N3F8 863 aa13.11□□□□□ -0.31
TUBA1A-207ENST00000550767 CASD1Q96PB1 797 aa13.11□□□□□ -0.31
TUBA1A-207ENST00000550767 ASB2Q96Q27 587 aa13.11□□□□□ -0.31
TUBA1A-207ENST00000550767 CDT1Q9H211 546 aa13.11□□□□□ -0.31
TUBA1A-207ENST00000550767 UBN1Q9NPG3 1134 aa13.11□□□□□ -0.31
TUBA1A-207ENST00000550767 MTUS1Q9ULD2 1270 aa13.11□□□□□ -0.31
TUBA1A-207ENST00000550767 INPP5FQ9Y2H2 1132 aa13.11□□□□□ -0.31
TUBA1A-207ENST00000550767 RWDD3Q9Y3V2 267 aa13.11□□□□□ -0.31
TUBA1A-207ENST00000550767 PCDHB13Q9Y5F0 798 aa13.11□□□□□ -0.31
TUBA1A-207ENST00000550767 MRPL42Q9Y6G3 142 aaKnown RBP13.11□□□□□ -0.31
TUBA1A-207ENST00000550767 PDCD11Q14690 1871 aaKnown RBP13.1□□□□□ -0.31
TUBA1A-207ENST00000550767 CLDN3O15551 220 aa13.1□□□□□ -0.31
TUBA1A-207ENST00000550767 LPXNO60711 386 aa13.1□□□□□ -0.31
TUBA1A-207ENST00000550767 OFD1O75665 1012 aa13.1□□□□□ -0.31
TUBA1A-207ENST00000550767 PIGRP01833 764 aa13.1□□□□□ -0.31
TUBA1A-207ENST00000550767 MYBP10242 640 aa13.1□□□□□ -0.31
TUBA1A-207ENST00000550767 MCF2P10911 925 aa13.1□□□□□ -0.31
TUBA1A-207ENST00000550767 PROZP22891 400 aa13.1□□□□□ -0.31
TUBA1A-207ENST00000550767 MATR3P43243 847 aaKnown RBP eCLIP13.1□□□□□ -0.31
TUBA1A-207ENST00000550767 CASP5P51878 434 aa13.1□□□□□ -0.31
TUBA1A-207ENST00000550767 UBE2HP62256 183 aa13.1□□□□□ -0.31
TUBA1A-207ENST00000550767 SNW1Q13573 536 aaKnown RBP13.1□□□□□ -0.31
TUBA1A-207ENST00000550767 NOLC1Q14978 699 aaKnown RBP eCLIP13.1□□□□□ -0.31
TUBA1A-207ENST00000550767 NOMO2Q5JPE7 1267 aa13.1□□□□□ -0.31
TUBA1A-207ENST00000550767 SPOUT1Q5T280 376 aaKnown RBP13.1□□□□□ -0.31
TUBA1A-207ENST00000550767 CLEC17AQ6ZS10 378 aa13.1□□□□□ -0.31
TUBA1A-207ENST00000550767 ZBTB33Q86T24 672 aa13.1□□□□□ -0.31
TUBA1A-207ENST00000550767 ENGASEQ8NFI3 743 aa13.1□□□□□ -0.31
TUBA1A-207ENST00000550767 URGCPQ8TCY9 931 aa13.1□□□□□ -0.31
TUBA1A-207ENST00000550767 CLP1Q92989 425 aaKnown RBP13.1□□□□□ -0.31
TUBA1A-207ENST00000550767 CCDC47Q96A33 483 aaKnown RBP13.1□□□□□ -0.31
TUBA1A-207ENST00000550767 GBP4Q96PP9 640 aa13.1□□□□□ -0.31
TUBA1A-207ENST00000550767 C17orf80Q9BSJ5 609 aa13.1□□□□□ -0.31
TUBA1A-207ENST00000550767 RNF39Q9H2S5 420 aa13.1□□□□□ -0.31
TUBA1A-207ENST00000550767 PTPRHQ9HD43 1115 aa13.1□□□□□ -0.31
TUBA1A-207ENST00000550767 EXOC1Q9NV70 894 aa13.1□□□□□ -0.31
TUBA1A-207ENST00000550767 LMCD1Q9NZU5 365 aa13.1□□□□□ -0.31
TUBA1A-207ENST00000550767 PARP2Q9UGN5 583 aa13.1□□□□□ -0.31
TUBA1A-207ENST00000550767 EXOC7Q9UPT5 735 aa13.1□□□□□ -0.31
TUBA1A-207ENST00000550767 GIT1Q9Y2X7 761 aa13.1□□□□□ -0.31
TUBA1A-207ENST00000550767 PLXNA4Q9HCM2 1894 aa13.1□□□□□ -0.31
TUBA1A-207ENST00000550767 ZMYM2Q9UBW7 1377 aa13.1□□□□□ -0.31
TUBA1A-207ENST00000550767 ABLIM1O14639 778 aa13.09□□□□□ -0.31
TUBA1A-207ENST00000550767 KINO60870 393 aaKnown RBP13.09□□□□□ -0.31
TUBA1A-207ENST00000550767 NR1I2O75469 434 aa13.09□□□□□ -0.31
TUBA1A-207ENST00000550767 RECQL4O94761 1208 aa13.09□□□□□ -0.31
TUBA1A-207ENST00000550767 PRR29P0C7W0 189 aa13.09□□□□□ -0.31
TUBA1A-207ENST00000550767 HARSP12081 509 aaKnown RBP13.09□□□□□ -0.31
TUBA1A-207ENST00000550767 AKAP5P24588 427 aa13.09□□□□□ -0.31
TUBA1A-207ENST00000550767 CTNNB1P35222 781 aa13.09□□□□□ -0.31
TUBA1A-207ENST00000550767 MLH1P40692 756 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms