RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 CCNYQ8ND76 341 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 LRRC40Q9H9A6 602 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 ANAPC2Q9UJX6 822 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 AKAP10O43572 662 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 HUS1O60921 280 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 LIG4P49917 911 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 MFAP3P55082 362 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 MREGQ8N565 214 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 SHCBP1Q8NEM2 672 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 TSPAN14Q8NG11 270 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 RUBCNQ92622 972 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 DGCR14Q96DF8 476 aaKnown RBP9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 FHOD3Q2V2M9 1422 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 EPC2Q52LR7 807 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 LACTB2Q53H82 288 aaPredicted RBP9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 HAUS6Q7Z4H7 955 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 GSAPA4D1B5 854 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 ZNF862O60290 1169 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 ABCB4P21439 1286 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 NSUN2Q08J23 767 aaKnown RBP eCLIP9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 RESTQ13127 1097 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 MACC1Q6ZN28 852 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 ARMCX2Q7L311 632 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 CACTIN-AS1Q8N1I8 211 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 UXS1Q8NBZ7 420 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 PNPLA8Q9NP80 782 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 AP1G2O75843 785 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 ACOT12Q8WYK0 555 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 AP3S1Q92572 193 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 C12orf4Q9NQ89 552 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 MOCS3O95396 460 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 ZBED1O96006 694 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 BST2Q10589 180 aaKnown RBP9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 SCARA3Q6AZY7 606 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 Q6ZUG5 572 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 EGFL8Q99944 293 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 APOL1O14791 398 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 PRIM1P49642 420 aaKnown RBP9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 NPHS2Q9NP85 383 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 ASAP1Q9ULH1 1129 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 SLC4A4Q9Y6R1 1079 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 PDS5AQ29RF7 1337 aaKnown RBP9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 CES2O00748 559 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 MDM4O15151 490 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 AP3S2P59780 193 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 RBBP4Q09028 425 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 CNTN1Q12860 1018 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 RHOBTB2Q9BYZ6 727 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 RGS18Q9NS28 235 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 MYH14Q7Z406 1995 aaKnown RBP9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 USP1O94782 785 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 TCF4P15884 667 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 ITGA3P26006 1051 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 SFNP31947 248 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 KRT26Q7Z3Y9 468 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 SFR1Q86XK3 245 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 UBASH3BQ8TF42 649 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 IL16Q14005 1332 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 GTF2E2P29084 291 aaKnown RBP9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 FEN1P39748 380 aaKnown RBP9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 ATP8B2P98198 1209 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 DSG1Q02413 1049 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 PTGES3Q15185 160 aaKnown RBP9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 C1orf94Q6P1W5 598 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 MOV10L1Q9BXT6 1211 aaKnown RBP9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 XKR8Q9H6D3 395 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 PPCSQ9HAB8 311 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 ATF6P18850 670 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 ZSWIM7Q19AV6 140 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 BBS1Q8NFJ9 593 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 USP13Q92995 863 aaPredicted RBP9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 ARID1AO14497 2285 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 UFL1O94874 794 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 BEST2Q8NFU1 509 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 MSANTD3Q96H12 275 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 CCDC115Q96NT0 180 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 APOL6Q9BWW8 343 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 FCGR1AP12314 374 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 DARSP14868 501 aaKnown RBP9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 RGS2P41220 211 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 TFDP1Q14186 410 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 USP51Q70EK9 711 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 THAP5Q7Z6K1 395 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 TSPAN17Q96FV3 270 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 GTF2H3Q13889 308 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 ITCHQ96J02 903 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 C12orf66Q96MD2 445 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 NEDD4LQ96PU5 975 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 POLR1BQ9H9Y6 1135 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 NEMP1O14524 444 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 SEC24DO94855 1032 aaPredicted RBP9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 GTF2H1P32780 548 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 DNM1Q05193 864 aaKnown RBP9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 PTPN12Q05209 780 aaKnown RBP9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 LRRC74AQ0VAA2 488 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 IFT43Q96FT9 208 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 CCDC141Q6ZP82 1450 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 KDM2BQ8NHM5 1336 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 MAGEB6P1A0A0J9YX57 407 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms