RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 PXMP2Q9NR77 195 aa8.35□□□□□ -1.07
HERC4-202ENST00000373700 TOPORSQ9NS56 1045 aaPredicted RBP8.35□□□□□ -1.07
HERC4-202ENST00000373700 SEL1LQ9UBV2 794 aa8.35□□□□□ -1.07
HERC4-202ENST00000373700 ANAPC5Q9UJX4 755 aa8.35□□□□□ -1.07
HERC4-202ENST00000373700 PNMA2Q9UL42 364 aa8.35□□□□□ -1.07
HERC4-202ENST00000373700 CCDC188H7C350 402 aa8.35□□□□□ -1.07
HERC4-202ENST00000373700 RASGRF2O14827 1237 aa8.35□□□□□ -1.07
HERC4-202ENST00000373700 SFNP31947 248 aa8.35□□□□□ -1.07
HERC4-202ENST00000373700 ZNF157P51786 506 aaPredicted RBP8.35□□□□□ -1.07
HERC4-202ENST00000373700 SEMA3FQ13275 785 aa8.35□□□□□ -1.07
HERC4-202ENST00000373700 SNRNP35Q16560 246 aaKnown RBP8.35□□□□□ -1.07
HERC4-202ENST00000373700 MAPK6Q16659 721 aa8.35□□□□□ -1.07
HERC4-202ENST00000373700 CDO1Q16878 200 aa8.35□□□□□ -1.07
HERC4-202ENST00000373700 SYCP2LQ5T4T6 812 aa8.35□□□□□ -1.07
HERC4-202ENST00000373700 PAPD7Q5XG87 772 aaKnown RBP8.35□□□□□ -1.07
HERC4-202ENST00000373700 MOV10L1Q9BXT6 1211 aaKnown RBP8.35□□□□□ -1.07
HERC4-202ENST00000373700 STK33Q9BYT3 514 aa8.35□□□□□ -1.07
HERC4-202ENST00000373700 PNMA3Q9UL41 463 aa8.35□□□□□ -1.07
HERC4-202ENST00000373700 PITPNM2Q9BZ72 1349 aa8.35□□□□□ -1.07
HERC4-202ENST00000373700 WDR91A4D1P6 747 aa8.35□□□□□ -1.07
HERC4-202ENST00000373700 KLRG2A4D1S0 409 aaPredicted RBP8.35□□□□□ -1.07
HERC4-202ENST00000373700 STAM2O75886 525 aa8.35□□□□□ -1.07
HERC4-202ENST00000373700 KRT1P04264 644 aa8.35□□□□□ -1.07
HERC4-202ENST00000373700 MYL3P08590 195 aa8.35□□□□□ -1.07
HERC4-202ENST00000373700 ITGA4P13612 1032 aa8.35□□□□□ -1.07
HERC4-202ENST00000373700 FGFR4P22455 802 aa8.35□□□□□ -1.07
HERC4-202ENST00000373700 TCF7P36402 384 aaPredicted RBP8.35□□□□□ -1.07
HERC4-202ENST00000373700 CLCN3P51790 818 aa8.35□□□□□ -1.07
HERC4-202ENST00000373700 PPP2R5EQ16537 467 aa8.35□□□□□ -1.07
HERC4-202ENST00000373700 SIAH1Q8IUQ4 282 aa8.35□□□□□ -1.07
HERC4-202ENST00000373700 FBXL13Q8NEE6 735 aa8.35□□□□□ -1.07
HERC4-202ENST00000373700 RIT2Q99578 217 aa8.35□□□□□ -1.07
HERC4-202ENST00000373700 HOMER3Q9NSC5 361 aa8.35□□□□□ -1.07
HERC4-202ENST00000373700 FAM169AQ9Y6X4 670 aa8.35□□□□□ -1.07
HERC4-202ENST00000373700 TARSL2A2RTX5 802 aaKnown RBP8.35□□□□□ -1.07
HERC4-202ENST00000373700 IQCA1LA6NCM1 817 aa8.35□□□□□ -1.07
HERC4-202ENST00000373700 SNHG28P0DPA3 235 aa8.35□□□□□ -1.07
HERC4-202ENST00000373700 BPIFB4P59827 614 aa8.35□□□□□ -1.07
HERC4-202ENST00000373700 NEDD9Q14511 834 aa8.35□□□□□ -1.07
HERC4-202ENST00000373700 SETDB1Q15047 1291 aa8.35□□□□□ -1.07
HERC4-202ENST00000373700 TAF1CQ15572 869 aaPredicted RBP8.35□□□□□ -1.07
HERC4-202ENST00000373700 SMAD1Q15797 465 aaKnown RBP8.35□□□□□ -1.07
HERC4-202ENST00000373700 GLE1Q53GS7 698 aaKnown RBP8.35□□□□□ -1.07
HERC4-202ENST00000373700 FAM133BQ5BKY9 247 aaKnown RBP8.35□□□□□ -1.07
HERC4-202ENST00000373700 DNAJC24Q6P3W2 148 aa8.35□□□□□ -1.07
HERC4-202ENST00000373700 CCDC137Q6PK04 289 aaKnown RBP8.35□□□□□ -1.07
HERC4-202ENST00000373700 CATSPER4Q7RTX7 472 aa8.35□□□□□ -1.07
HERC4-202ENST00000373700 PALM2Q8IXS6 379 aa8.35□□□□□ -1.07
HERC4-202ENST00000373700 COPS5Q92905 334 aa8.35□□□□□ -1.07
HERC4-202ENST00000373700 DNAJC19Q96DA6 116 aa8.35□□□□□ -1.07
HERC4-202ENST00000373700 TLR10Q9BXR5 811 aa8.35□□□□□ -1.07
HERC4-202ENST00000373700 RBAKQ9NYW8 714 aaPredicted RBP8.35□□□□□ -1.07
HERC4-202ENST00000373700 COL20A1Q9P218 1284 aa8.35□□□□□ -1.07
HERC4-202ENST00000373700 PCSK1NQ9UHG2 260 aa8.35□□□□□ -1.07
HERC4-202ENST00000373700 AGO2Q9UKV8 859 aaKnown RBP8.35□□□□□ -1.07
HERC4-202ENST00000373700 MAGED2Q9UNF1 606 aaPredicted RBP8.35□□□□□ -1.07
HERC4-202ENST00000373700 ALG6Q9Y672 507 aa8.35□□□□□ -1.07
HERC4-202ENST00000373700 COL16A1Q07092 1604 aaPredicted RBP8.34□□□□□ -1.07
HERC4-202ENST00000373700 A6NNZ2 444 aa8.34□□□□□ -1.07
HERC4-202ENST00000373700 RNF8O76064 485 aa8.34□□□□□ -1.07
HERC4-202ENST00000373700 MYBL2P10244 700 aa8.34□□□□□ -1.07
HERC4-202ENST00000373700 CUL1Q13616 776 aa8.34□□□□□ -1.07
HERC4-202ENST00000373700 TTLL4Q14679 1199 aa8.34□□□□□ -1.07
HERC4-202ENST00000373700 TMEM132BQ14DG7 1078 aa8.34□□□□□ -1.07
HERC4-202ENST00000373700 TMED2Q15363 201 aa8.34□□□□□ -1.07
HERC4-202ENST00000373700 TUBB8Q3ZCM7 444 aa8.34□□□□□ -1.07
HERC4-202ENST00000373700 TREML2Q5T2D2 321 aa8.34□□□□□ -1.07
HERC4-202ENST00000373700 GPC2Q8N158 579 aa8.34□□□□□ -1.07
HERC4-202ENST00000373700 SLC20A1Q8WUM9 679 aa8.34□□□□□ -1.07
HERC4-202ENST00000373700 CDCA5Q96FF9 252 aa8.34□□□□□ -1.07
HERC4-202ENST00000373700 CPA4Q9UI42 421 aa8.34□□□□□ -1.07
HERC4-202ENST00000373700 GGT7Q9UJ14 662 aa8.34□□□□□ -1.07
HERC4-202ENST00000373700 SIK3Q9Y2K2 1263 aa8.34□□□□□ -1.07
HERC4-202ENST00000373700 SNED1Q8TER0 1413 aa8.34□□□□□ -1.07
HERC4-202ENST00000373700 ZRANB2O95218 330 aaKnown RBP eCLIP8.34□□□□□ -1.073e-7■■■■□ 26
HERC4-202ENST00000373700 CALCAP01258 141 aa8.34□□□□□ -1.07
HERC4-202ENST00000373700 ATP2A2P16615 1042 aaKnown RBP8.34□□□□□ -1.07
HERC4-202ENST00000373700 PBX1P40424 430 aa8.34□□□□□ -1.07
HERC4-202ENST00000373700 KCNMA1Q12791 1236 aa8.34□□□□□ -1.07
HERC4-202ENST00000373700 ORC1Q13415 861 aa8.34□□□□□ -1.07
HERC4-202ENST00000373700 LRRC55Q6ZSA7 311 aa8.34□□□□□ -1.07
HERC4-202ENST00000373700 USP38Q8NB14 1042 aa8.34□□□□□ -1.07
HERC4-202ENST00000373700 TCP11Q8WWU5 503 aa8.34□□□□□ -1.07
HERC4-202ENST00000373700 DHX38Q92620 1227 aaKnown RBP8.34□□□□□ -1.07
HERC4-202ENST00000373700 ELAC2Q9BQ52 826 aaKnown RBP8.34□□□□□ -1.07
HERC4-202ENST00000373700 SYT17Q9BSW7 474 aa8.34□□□□□ -1.07
HERC4-202ENST00000373700 SPATC1LQ9H0A9 340 aa8.34□□□□□ -1.07
HERC4-202ENST00000373700 AP5M1Q9H0R1 490 aa8.34□□□□□ -1.07
HERC4-202ENST00000373700 RRAGCQ9HB90 399 aa8.34□□□□□ -1.07
HERC4-202ENST00000373700 SLC38A10Q9HBR0 1119 aa8.34□□□□□ -1.07
HERC4-202ENST00000373700 TXNDC16Q9P2K2 825 aa8.34□□□□□ -1.07
HERC4-202ENST00000373700 H7C0C1 242 aa8.34□□□□□ -1.08
HERC4-202ENST00000373700 NKRFO15226 690 aaKnown RBP eCLIP8.34□□□□□ -1.08
HERC4-202ENST00000373700 CTSHP09668 335 aa8.34□□□□□ -1.08
HERC4-202ENST00000373700 PLS3P13797 630 aa8.34□□□□□ -1.08
HERC4-202ENST00000373700 COMTP21964 271 aa8.34□□□□□ -1.08
HERC4-202ENST00000373700 SCP2P22307 547 aa8.34□□□□□ -1.08
HERC4-202ENST00000373700 ATP5DP30049 168 aa8.34□□□□□ -1.08
HERC4-202ENST00000373700 ATP5OP48047 213 aa8.34□□□□□ -1.08
HERC4-202ENST00000373700 RARRES1P49788 294 aa8.34□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms