RNA–Protein interactions for RNA: ENSMUST00000029222.7

Ccdc39-201, Transcript of Coiled-coil domain-containing protein 39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc39, Length 3,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39-201ENSMUST00000029222 Fermt3Q8K1B8 665 aa8.4□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Scrn2Q8VCA8 425 aa8.4□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Mxra8Q9DBV4 442 aa8.4□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Exoc3l2D3YUP5 789 aa8.4□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Efna5O08543 228 aa8.4□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 SpibO35906 267 aa8.4□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Alkbh1P0CB42 389 aa8.4□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Vamp7P70280 220 aa8.4□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Casp7P97864 303 aa8.4□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Muc1Q02496 630 aa8.4□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Cdca2Q14B71 982 aaKnown RBP8.4□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Tmtc1Q3UV71 942 aa8.4□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Avpr1aQ62463 423 aa8.4□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Ccdc57Q6PHN1 1016 aa8.4□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Fmnl3Q6ZPF4 1028 aa8.4□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Tubb2aQ7TMM9 445 aa8.4□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 H2-Q4Q8HWB2 354 aa8.4□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Spata2Q8K004 515 aa8.4□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Sash3Q8K352 380 aa8.4□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Nup58Q8R332 587 aa8.4□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Tlr3Q99MB1 905 aa8.4□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Pkp2Q9CQ73 795 aaKnown RBP8.4□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Tubb2bQ9CWF2 445 aa8.4□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Zcchc17Q9ESX4 241 aaKnown RBP8.4□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 PolkQ9QUG2 852 aa8.4□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 PurbO35295 324 aaKnown RBP8.4□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Fcer2P20693 331 aa8.4□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Wnt7bP28047 349 aa8.4□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 IvlP48997 467 aa8.4□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Vsnl1P62761 191 aa8.4□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Spryd7Q3TFQ1 196 aa8.4□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Upf3bQ3ULL6 472 aa8.4□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Ccdc157Q5SPX1 718 aa8.4□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Sema4bQ62179 823 aa8.4□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 PoliQ6R3M4 717 aa8.4□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 C6.1alQ7M757 291 aa8.4□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Rnf139Q7TMV1 668 aa8.4□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 AdalQ80SY6 360 aa8.4□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Znf579Q80VM4 562 aa8.4□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 WhrnQ80VW5 918 aa8.4□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Myef2Q8C854 591 aaKnown RBP8.4□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Calhm6Q8C9E8 313 aa8.4□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Fam228aQ8CDW1 299 aa8.4□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Ccdc28aQ8CEI3 192 aa8.4□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Parp10Q8CIE4 960 aa8.4□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Rpp40Q8R1F9 363 aa8.4□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Pcdhgc5Q91XW9 944 aa8.4□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Cnot8Q9D8X5 292 aa8.4□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Nudt12Q9DCN1 462 aa8.4□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Zkscan5Q9Z1D8 819 aa8.4□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Arih1Q9Z1K5 555 aa8.4□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Myh11O08638 1972 aa8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Col2a1P28481 1487 aa8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Btbd18A0A0A6YY25 723 aa8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Slc35g2D3YVE8 412 aa8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Cd44P15379 778 aa8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Xrcc6P23475 608 aa8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 PgfP49764 158 aa8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Sesn2P58043 480 aa8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Fam214aQ69ZK7 1075 aa8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Celf6Q7TN33 460 aaKnown RBP8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Iqcb1Q8BP00 598 aa8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Ttc16Q8C1F5 767 aa8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Card14Q99KF0 999 aa8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Sertad2Q9JJG5 309 aa8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Lamb1P02469 1786 aa8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Kif3cO35066 796 aa8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Mdh1P14152 334 aa8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 MafbP54841 323 aa8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Cdr2P97817 455 aa8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Mgat3Q10470 538 aa8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Agxt2Q3UEG6 513 aa8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Lrch2Q3UMG5 773 aa8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Ctnna2Q61301 953 aa8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Ugt1a9Q62452 528 aa8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Rhbdf1Q6PIX5 856 aa8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Kcnt1Q6ZPR4 1224 aa8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 F13a1Q8BH61 732 aa8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Cyp2d26Q8CIM7 500 aa8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Cdk17Q8K0D0 523 aa8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Plekhh3Q8VCE9 796 aa8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 YarsQ91WQ3 528 aaKnown RBP8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Usp26Q99MX1 835 aa8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Fam187aQ9D3R5 417 aa8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 FignQ9ERZ6 759 aa8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Stk4Q9JI11 487 aa8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Wfdc16A2A5H4 111 aa8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Osbpl7A2A716 963 aa8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Trim43aQ3TL54 445 aa8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Mfhas1Q3V1N1 1048 aa8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Myl6Q60605 151 aaKnown RBP8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 E2f7Q6S7F2 904 aa8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Tmem260Q8BMD6 703 aa8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Mbtps2Q8CHX6 515 aa8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Bbs5Q9CZQ9 341 aa8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Ankef1Q9D2J7 775 aa8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Cep72Q9D3R3 646 aa8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Atp13a1Q9EPE9 1200 aaKnown RBP8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Rilpl1Q9JJC6 406 aa8.39□□□□□ -1.07
Ccdc39-201ENSMUST00000029222 Gadd45gQ9Z111 159 aa8.39□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 18.1 ms